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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 521 52.83 0 527471..528070 + 199 26246440 - c0545 - hypothetical protein 522 51.30 0 527516..528094 - 192 161486293 yajG c0546 - hypothetical protein 523 42.42 -1 528144..528275 - 43 26246442 - c0547 - hypothetical protein 524 48.43 0 528399..528716 + 105 161486292 bolA c0548 - transcriptional regulator BolA 525 47.04 0 528643..529065 - 140 26246444 - c0549 - hypothetical protein 526 43.92 -1 528725..528913 + 62 26246445 - c0550 - hypothetical protein 527 51.35 0 529060..530358 + 432 26246446 tig c0551 - trigger factor 528 51.31 0 529069..530370 - 433 26246447 - c0552 - hypothetical protein 529 50.16 0 530604..531227 + 207 26246448 clpP c0553 - ATP-dependent Clp protease proteolytic subunit 530 51.69 0 531353..532627 + 424 26246449 clpX c0554 - ATP-dependent protease ATP-binding subunit 531 52.25 0 532770..535169 + 799 26246450 lon c0555 - DNA-binding ATP-dependent protease La 532 49.08 0 535378..535650 + 90 26246451 hupB c0556 - transcriptional regulator HU subunit beta 533 52.14 0 535842..537713 + 623 26246452 ybaU c0557 - peptidyl-prolyl cis-trans isomerase (rotamase D) 534 54.03 0 537864..538235 + 123 26246453 ybaV c0558 - hypothetical protein 535 46.37 0 538341..538739 + 132 26246454 ybaW c0559 - hypothetical protein 536 51.58 0 538791..539486 - 231 26246455 ybaX c0560 - queuosine biosynthesis protein QueC 537 52.86 0 539551..541266 - 571 26246456 ybaE c0561 - hypothetical protein 538 50.78 0 541339..542169 + 276 26246457 cof c0562 - Cof protein 539 46.08 0 542302..542811 + 169 26246458 - c0563 - hypothetical protein 540 48.32 0 542925..543491 + 188 26246459 ybaO c0564 - putative transcriptional regulator YbaO 541 53.36 0 543521..545293 + 590 26246460 mdlA c0565 - putative multidrug transporter membrane\ATP-binding components 542 55.96 +1 545172..547067 + 631 26246461 mdlB c0566 - putative multidrug transporter membrane\ATP-binding components 543 41.84 -1 547081..547221 - 46 26246462 - c0567 - hypothetical protein 544 51.03 0 547248..547586 + 112 26246463 glnK c0568 - nitrogen regulatory protein P-II 2 545 50.00 0 547305..547538 - 77 26246464 - c0569 - hypothetical protein 546 55.79 +1 547616..548902 + 428 26246465 amtB c0570 - ammonium transporter 547 51.75 0 548951..549895 - 314 26246466 tesB c0571 - acyl-CoA thioesterase II 548 54.45 0 550029..550601 + 190 26246467 ybaY c0572 - hypothetical protein 549 54.74 0 550632..551042 - 136 26246468 ybaZ c0573 - hypothetical protein 550 48.31 0 551322..551675 + 117 26246469 ybaA c0574 - hypothetical protein 551 47.91 0 551717..553273 - 518 26246470 ylaB c0575 - hypothetical protein 552 46.47 0 553431..553940 - 169 26246471 ylaC c0576 - hypothetical protein 553 47.83 0 554017..554568 - 183 26246472 ylaD c0577 - maltose O-acetyltransferase 554 40.69 -1 554741..554971 - 76 26246473 hha c0578 - hemolysin expression-modulating protein 555 40.53 -1 554985..555359 - 124 26246474 ybaJ c0579 - hypothetical protein 556 53.40 0 555904..559053 - 1049 26246475 acrB c0580 - acriflavin resistance protein B 557 53.25 0 559076..560305 - 409 26246476 acrA c0581 - acriflavin resistance protein A 558 45.83 0 560411..561058 + 215 26246477 acrR c0582 - DNA-binding transcriptional repressor AcrR 559 40.00 -1 561140..561304 + 54 26246478 - c0583 - hypothetical protein 560 51.92 0 561186..564548 + 1120 26246479 aefA c0584 - potassium efflux protein KefA 561 48.77 0 564760..564921 - 53 26246480 ybaM c0585 - hypothetical protein 562 59.09 +1 564935..565462 - 175 26246481 priC c0586 - primosomal replication protein N'' 563 51.06 0 565532..565909 + 125 26246482 ybaN c0587 - hypothetical protein 564 53.47 0 566008..566613 + 201 26246483 apt c0588 - adenine phosphoribosyltransferase 565 56.99 +1 566742..568673 + 643 26246484 dnaX c0589 - DNA polymerase III subunits gamma and tau 566 51.59 0 568702..569079 - 125 26246485 - c0590 - hypothetical protein 567 51.88 0 568711..569055 + 114 26246486 ybaB c0591 - hypothetical protein 568 56.93 +1 569055..569660 + 201 26246487 recR c0592 - recombination protein RecR 569 52.69 0 569770..571644 + 624 26246488 htpG c0593 - heat shock protein 90 570 52.56 0 571825..572469 + 214 161486291 adk c0594 - adenylate kinase 571 53.89 0 572601..573563 + 320 26246490 hemH c0595 - ferrochelatase 572 51.88 0 573560..574519 - 319 26246491 ybaC c0596 - acetyl esterase 573 52.03 0 574671..575975 + 434 26246492 gsk c0597 - inosine-guanosine kinase 574 55.28 0 576105..577781 - 558 26246493 ybaL c0598 - putative cation:proton antiport protein 575 52.17 0 578019..579239 - 406 26246494 fsr c0599 - fosmidomycin resistance protein 576 50.82 0 579457..581109 + 550 26246495 ushA c0600 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 577 50.00 0 581146..581625 - 159 26246496 ybaK c0601 - hypothetical protein 578 53.84 0 581829..582623 - 264 26246497 ybaP c0602 - hypothetical protein 579 45.03 0 583093..583434 + 113 26246498 ybaQ c0603 - hypothetical protein 580 58.00 +1 583492..585996 - 834 26246499 ybaR c0604 - copper exporting ATPase 581 53.27 0 586259..587191 + 310 26246500 ybaS c0605 - glutaminase 582 53.75 0 587194..588486 + 430 26246501 ybaT c0606 - putative transport protein YbaT 583 55.88 +1 588611..589018 + 135 26246502 ybbI c0607 - DNA-binding transcriptional regulator CueR 584 52.21 0 589019..590242 - 407 26246503 - c0608 - hypothetical protein 585 58.39 +1 590361..590819 - 152 26246504 ybbJ c0609 - hypothetical protein 586 52.72 0 590816..591733 - 305 26246505 ybbK c0610 - hypothetical protein 587 45.37 0 591876..592556 + 226 26246506 ybbL c0611 - putative ABC transporter ATP-binding protein YbbL 588 54.66 0 593386..594276 - 296 26246507 ybbN c0613 - hypothetical protein 589 54.07 0 594301..595110 - 269 26246508 ybbO c0614 - short chain dehydrogenase 590 53.12 0 595100..595756 - 218 26246509 tesA c0615 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 591 55.75 +1 595694..596380 + 228 26246510 ybbA c0616 - putative ABC transporter ATP-binding protein YbbA 592 58.34 +1 596377..598791 + 804 26246511 ybbP c0617 - hypothetical protein 593 55.00 0 598942..599901 - 319 26246512 ybbB c0618 - tRNA 2-selenouridine synthase 594 52.21 0 600096..601022 - 308 26246513 ybbS c0619 - DNA-binding transcriptional activator AllS 595 50.52 0 601252..601734 + 160 26246514 ybbT c0620 - ureidoglycolate hydrolase 596 53.31 0 601812..602627 + 271 26246515 ybbU c0621 - DNA-binding transcriptional repressor AllR 597 53.03 0 602717..604498 + 593 161486290 gcl c0622 - glyoxylate carboligase 598 44.66 0 604511..605287 + 258 26246517 gip c0623 - hydroxypyruvate isomerase 599 50.40 0 605387..606265 + 292 26246518 ybbQ c0624 - 2-hydroxy-3-oxopropionate reductase 600 47.29 0 606435..607889 + 484 26246519 ybbW c0625 - allantoin permease 601 51.47 0 607949..609310 + 453 26246520 ybbX c0626 - allantoinase 602 51.22 0 609360..610667 + 435 26246521 ybbY c0627 - putative purine permease YbbY 603 55.90 +1 610683..611834 + 383 26246522 ybbZ c0628 - glycerate kinase II 604 46.69 0 611963..612748 - 261 26246523 ylbA c0629 - hypothetical protein 605 51.44 0 612759..614012 - 417 26246524 ylbB c0630 - allantoate amidohydrolase 606 52.29 0 614016..615065 - 349 26246525 - c0631 - ureidoglycolate dehydrogenase 607 55.52 0 615382..617049 + 555 26246526 fdrA c0632 - membrane protein FdrA 608 56.90 +1 617059..618318 + 419 26246527 ylbE c0633 - hypothetical protein 609 57.98 +1 618236..619144 + 302 26246528 ylbF c0634 - hypothetical protein 610 57.61 +1 619141..620034 + 297 26246529 arcC c0635 - carbamate kinase 611 56.46 +1 620167..621234 - 355 26246530 purK c0636 - phosphoribosylaminoimidazole carboxylase ATPase subunit 612 57.54 +1 621231..621767 - 178 26246531 purE c0637 - phosphoribosylaminoimidazole carboxylase catalytic subunit 613 44.55 -1 621836..622165 - 109 26246532 - c0638 - hypothetical protein 614 53.80 0 622276..622998 - 240 26246533 ybbF c0639 - UDP-2,3-diacylglucosamine hydrolase 615 47.31 0 622989..623675 + 228 26246534 - c0640 - hypothetical protein 616 47.68 0 623001..623495 - 164 26246535 ppiB c0641 - peptidyl-prolyl cis-trans isomerase B (rotamase B) 617 54.18 0 623669..625054 + 461 26246536 cysS c0642 - cysteinyl-tRNA synthetase 618 52.05 0 625090..625527 - 145 26246537 ybcI c0643 - hypothetical protein 619 54.46 0 625720..625932 - 70 161486289 ybcJ c0644 - hypothetical protein 620 54.79 0 625934..626800 - 288 26246539 folD c0645 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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