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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 428 55.67 0 438334..439224 + 296 26246347 prpB c0451 - 2-methylisocitrate lyase 429 55.73 0 439384..440553 + 389 26246348 prpC c0452 - methylcitrate synthase 430 56.34 +1 440587..442038 + 483 26246349 prpD c0453 - 2-methylcitrate dehydratase 431 57.55 +1 442078..443964 + 628 26246350 prpE c0454 - propionyl-CoA synthetase 432 54.05 0 444289..445548 + 419 26246351 codB c0455 - cytosine permease 433 52.89 0 445523..446821 + 432 26246352 codA c0456 - cytosine deaminase 434 43.59 -1 446942..447604 - 220 26246353 lacA c0457 - galactoside O-acetyltransferase 435 46.17 0 447619..448872 - 417 26246354 lacY c0458 - galactoside permease 436 56.81 +1 448924..451998 - 1024 26246355 lacZ c0459 - beta-D-galactosidase 437 56.55 +1 452122..452388 - 88 26246356 - c0460 - LacI protein 438 47.41 0 453406..453945 + 179 161486305 yaiL c0462 - hypothetical protein 439 47.28 0 453448..453999 - 183 26246358 - c0463 - hypothetical protein 440 48.32 0 454173..455006 - 277 26246359 yaiM c0464 - hypothetical protein 441 53.06 0 455099..456208 - 369 26246360 adhC c0465 - alcohol dehydrogenase class III 442 53.20 0 456243..456539 - 98 26246361 yaiN c0466 - regulator protein FrmR 443 49.61 0 456705..457478 - 257 26246362 - c0467 - hypothetical protein 444 46.48 0 457480..458004 - 174 26246363 - c0468 - putative transferase 445 50.21 0 458039..459235 - 398 26246364 - c0469 - hypothetical protein 446 42.79 -1 459245..459931 - 228 26246365 - c0470 - hypothetical protein 447 38.46 -2 460376..460570 - 64 26246366 - c0471 - hypothetical protein 448 55.97 +1 460524..461486 + 320 161486304 tauA c0472 - taurine transporter substrate binding subunit 449 55.34 0 461499..462266 + 255 26246368 tauB c0473 - taurine transporter ATP-binding subunit 450 59.37 +1 461900..462214 - 104 26246369 - c0474 - hypothetical protein 451 58.70 +1 462263..463090 + 275 26246370 tauC c0475 - taurine transporter subunit 452 54.34 0 463087..463938 + 283 26246371 tauD c0476 - taurine dioxygenase 453 53.87 0 463978..464985 - 335 26246372 hemB c0477 - delta-aminolevulinic acid dehydratase 454 45.98 0 465478..468465 + 995 26246373 - c0478 - putative structural protein 455 40.21 -1 468506..469174 + 222 26246374 yaiV c0479 - putative DNA-binding transcriptional regulator 456 54.92 0 469175..470332 - 385 26246375 yaiH c0480 - beta-lactamase/D-alanine carboxypeptidase 457 45.13 0 470470..470664 + 64 26246376 - c0481 - hypothetical protein 458 50.94 0 470678..471904 + 408 26246377 sbmA c0482 - transport protein 459 53.97 0 471917..473011 + 364 26246378 yaiW c0483 - hypothetical protein 460 51.46 0 473070..473378 - 102 26246379 yaiY c0484 - hypothetical protein 461 46.67 0 473308..473442 + 44 26246380 - c0485 - hypothetical protein 462 44.35 -1 473506..473850 + 114 26246381 yaiZ c0486 - hypothetical protein 463 51.14 0 473874..474968 - 364 26246382 ddl c0487 - D-alanyl-alanine synthetase A 464 39.84 -1 475046..475168 + 40 26246383 - c0488 - hypothetical protein 465 47.13 0 475431..475691 + 86 26246384 yaiB c0489 - hypothetical protein 466 52.05 0 475723..477207 + 494 26246385 phoA c0490 - alkaline phosphatase 467 48.38 0 477308..477646 + 112 26246386 psiF c0491 - hypothetical protein 468 53.85 0 477748..478863 + 371 26246387 yaiC c0492 - diguanylate cyclase AdrA 469 54.57 0 478880..479689 - 269 161486303 proC c0493 - pyrroline-5-carboxylate reductase 470 55.77 +1 479809..480267 + 152 161486302 yaiI c0494 - hypothetical protein 471 52.38 0 480450..480974 + 174 26246390 aroL c0495 - shikimate kinase II 472 48.44 0 481024..481215 + 63 26246391 yaiA c0496 - hypothetical protein 473 46.26 0 481406..481552 + 48 26246392 - c0497 - hypothetical protein 474 46.61 0 481473..482150 + 225 26246393 aroM c0498 - hypothetical protein 475 51.58 0 482222..482506 + 94 26246394 yaiE c0499 - hypothetical protein 476 42.31 -1 482610..482765 - 51 26246395 - c0500 - hypothetical protein 477 48.58 0 482714..482995 + 93 26246396 ykiA c0501 - hypothetical protein 478 51.75 0 483153..484064 - 303 161486301 rdgC c0502 - recombination associated protein 479 55.34 0 484189..485097 + 302 161486300 - c0503 - fructokinase 480 50.43 0 485366..486634 - 422 26246399 araJ c0504 - protein AraJ 481 53.82 0 486676..489819 - 1047 26246400 sbcC c0505 - exonuclease subunit SbcC 482 52.87 0 489816..491018 - 400 26246401 sbcD c0506 - exonuclease subunit SbcD 483 45.45 0 491004..491135 + 43 26246402 - c0507 - hypothetical protein 484 54.35 0 491208..491897 + 229 26246403 phoB c0508 - transcriptional regulator PhoB 485 53.24 0 491955..493250 + 431 26246404 phoR c0509 - phosphate regulon sensor protein 486 44.00 -1 493463..493612 - 49 26246405 - c0510 - hypothetical protein 487 55.38 0 493657..494976 + 439 26246406 brnQ c0511 - branched chain amino acid ABC transporter carrier protein 488 52.36 0 495049..496425 + 458 26246407 proY c0512 - putative proline-specific permease 489 54.73 0 496581..498398 + 605 26246408 malZ c0513 - maltodextrin glucosidase 490 52.41 0 498403..498984 - 193 161486299 yajB c0514 - acyl carrier protein phosphodiesterase 491 53.41 0 499203..500273 + 356 26246410 queA c0515 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 492 51.24 0 500328..501455 + 375 26246411 tgt c0516 - queuine tRNA-ribosyltransferase 493 49.55 0 501478..501810 + 110 161486298 yajC c0517 - preprotein translocase subunit YajC 494 53.25 0 501838..503685 + 615 26246413 secD c0518 - preprotein translocase subunit SecD 495 51.95 0 503696..504667 + 323 161486297 secF c0519 - preprotein translocase subunit SecF 496 46.28 0 504728..505144 + 138 26246415 yajD c0520 - hypothetical protein 497 50.70 0 505182..506114 - 310 26246416 tsx c0521 - nucleoside-specific channel-forming protein tsx precursor 498 47.41 0 506365..506904 - 179 161486296 yajI c0522 - hypothetical protein 499 51.11 0 507055..507504 + 149 26246418 ybaD c0523 - transcriptional regulator NrdR 500 54.89 0 507508..508611 + 367 26246419 ribD c0524 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 501 52.23 0 508700..509170 + 156 161486295 ribH c0525 - riboflavin synthase subunit beta 502 53.37 0 509160..509693 - 177 26246421 - c0526 - hypothetical protein 503 54.29 0 509190..509609 + 139 26246422 nusB c0527 - transcription antitermination protein NusB 504 55.01 0 509687..510664 + 325 26246423 thiL c0528 - thiamine monophosphate kinase 505 52.22 0 510642..511160 + 172 26246424 pgpA c0529 - phosphatidylglycerophosphatase A 506 53.85 0 511214..512188 - 324 26246425 yajO c0530 - oxidoreductase yajO 507 53.84 0 512243..514105 - 620 26246426 dxs c0531 - 1-deoxy-D-xylulose-5-phosphate synthase 508 53.67 0 514130..515029 - 299 26246427 ispA c0532 - geranyltranstransferase 509 54.32 0 515029..515271 - 80 26246428 xseB c0533 - exodeoxyribonuclease VII small subunit 510 52.45 0 515477..516925 + 482 26246429 yajK c0534 - thiamine biosynthesis protein ThiI 511 56.62 +1 516979..517575 - 198 26246430 thiJ c0535 - hypothetical protein 512 51.54 0 517532..518443 - 303 26246431 apbA c0536 - 2-dehydropantoate 2-reductase 513 48.78 0 518611..519102 + 163 161486294 yajQ c0537 - nucleotide-binding protein 514 51.50 0 519230..520792 - 520 26246433 yajR c0538 - putative transport protein YajR 515 53.31 0 520743..521633 - 296 26246434 cyoE c0539 - protoheme IX farnesyltransferase 516 49.70 0 521645..521974 - 109 26246435 cyoD c0540 - cytochrome o ubiquinol oxidase subunit IV 517 53.01 0 521974..522588 - 204 26246436 cyoC c0541 - cytochrome o ubiquinol oxidase subunit III 518 52.56 0 522578..524569 - 663 26246437 cyoB c0542 - cytochrome o ubiquinol oxidase subunit I 519 50.63 0 524591..525538 - 315 26246438 cyoA c0543 - cytochrome o ubiquinol oxidase subunit II 520 53.66 0 525997..527472 - 491 26246439 ampG c0544 - muropeptide transporter 521 52.83 0 527471..528070 + 199 26246440 - c0545 - hypothetical protein 522 51.30 0 527516..528094 - 192 161486293 yajG c0546 - hypothetical protein 523 42.42 -1 528144..528275 - 43 26246442 - c0547 - hypothetical protein 524 48.43 0 528399..528716 + 105 161486292 bolA c0548 - transcriptional regulator BolA 525 47.04 0 528643..529065 - 140 26246444 - c0549 - hypothetical protein 526 43.92 -1 528725..528913 + 62 26246445 - c0550 - hypothetical protein 527 51.35 0 529060..530358 + 432 26246446 tig c0551 - trigger factor 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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