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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4053 34.85 -2 3958643..3958774 - 43 26249999 - c4175 - hypothetical protein 4054 53.90 0 3958877..3960568 + 563 26250000 pckA c4176 - phosphoenolpyruvate carboxykinase 4055 46.67 0 3960691..3960870 + 59 26250001 - c4177 - hypothetical protein 4056 37.25 -2 3960843..3960995 + 50 26250002 - c4178 - hypothetical protein 4057 45.12 0 3961054..3961350 + 98 26250003 - c4179 - hypothetical protein 4058 56.32 +1 3961381..3962733 - 450 26250004 envZ c4180 - osmolarity sensor protein 4059 55.00 0 3962730..3963449 - 239 26250005 ompR c4181 - osmolarity response regulator 4060 37.63 -2 3963539..3963724 - 61 26250006 - c4182 - hypothetical protein 4061 50.10 0 3963677..3964153 + 158 161486092 greB c4183 - transcription elongation factor GreB 4062 56.55 +1 3964250..3966571 + 773 26250008 yhgF c4184 - hypothetical protein 4063 48.25 0 3967027..3967254 + 75 26250009 feoA c4185 - ferrous iron transport protein A 4064 54.95 0 3967271..3969592 + 773 161486091 feoB c4186 - ferrous iron transport protein B 4065 51.63 0 3969583..3969828 + 81 26250011 yhgG c4187 - hypothetical protein 4066 47.47 0 3970061..3970654 + 197 26250012 yhgA c4188 - hypothetical protein 4067 56.03 +1 3970683..3971453 - 256 26250013 bioH c4189 - carboxylesterase BioH 4068 56.43 +1 3971491..3972174 + 227 161486090 yhgH c4190 - gluconate periplasmic binding protein 4069 52.78 0 3972233..3972808 + 191 26250015 yhgI c4191 - putative DNA uptake protein 4070 53.45 0 3973172..3974488 + 438 26250016 gntT c4192 - high-affinity gluconate transporter 4071 54.68 0 3974599..3976683 - 694 26250017 malQ c4193 - 4-alpha-glucanotransferase 4072 51.96 0 3976693..3979086 - 797 26250018 malP c4194 - maltodextrin phosphorylase 4073 37.41 -2 3979431..3979577 - 48 26250019 - c4195 - hypothetical protein 4074 53.95 0 3979709..3982414 + 901 26250020 malT c4196 - transcriptional regulator MalT 4075 59.51 +1 3982457..3983476 - 339 26250021 - c4197 - RNA 3'-terminal-phosphate cyclase 4076 50.16 0 3983477..3984766 - 429 26250022 rtcB c4198 - protein rtcB 4077 55.16 0 3984892..3986490 + 532 26250023 rtcR c4199 - transcriptional regulatory protein rtcR 4078 52.84 0 3986472..3987281 - 269 26250024 glpR c4200 - DNA-binding transcriptional repressor GlpR 4079 54.51 0 3987247..3988077 - 276 26250025 glpG c4201 - intramembrane serine protease GlpG 4080 54.43 0 3988122..3988448 - 108 161486089 glpE c4202 - thiosulfate sulfurtransferase 4081 55.11 0 3988638..3990143 + 501 161486088 glpD c4203 - glycerol-3-phosphate dehydrogenase 4082 42.24 -1 3990197..3990802 - 201 26250028 - c4204 - hypothetical protein 4083 45.57 0 3990805..3991572 - 255 26250029 - c4205 - hypothetical protein 4084 46.13 0 3991575..3992285 - 236 26250030 - c4206 - hypothetical protein 4085 38.48 -2 3992579..3993589 - 336 26250031 - c4207 - putative fimbrial adhesin precursor 4086 38.85 -2 3993608..3994405 - 265 26250032 - c4208 - putative fimbrial chaperone precursor 4087 35.66 -2 3994350..3994907 - 185 26250033 - c4209 - putative minor fimbrial subunit precursor 4088 40.18 -1 3994873..3995325 - 150 26250034 - c4210 - putative minor fimbrial subunit precursor 4089 35.19 -2 3995303..3995464 + 53 26250035 - c4211 - hypothetical protein 4090 41.97 -1 3995436..3998030 - 864 26250036 ycbS c4212 - outer membrane usher protein ycbS precursor 4091 38.21 -2 3998067..3998846 - 259 26250037 - c4213 - chaperone protein fimC precursor 4092 47.66 0 3998920..3999624 - 234 26250038 - c4214 - putative major fimbrial subunit precursor 4093 51.47 0 4000119..4002566 - 815 26250039 glgP c4215 - glycogen phosphorylase 4094 54.88 0 4002585..4004018 - 477 26250040 glgA c4216 - glycogen synthase 4095 52.78 0 4004018..4005313 - 431 161486087 glgC c4217 - glucose-1-phosphate adenylyltransferase 4096 53.95 0 4005331..4007304 - 657 26250042 glgX c4218 - glycogen debranching enzyme 4097 53.09 0 4007301..4009487 - 728 26250043 glgB c4219 - glycogen branching enzyme 4098 53.44 0 4009760..4010863 - 367 161486086 asd c4220 - aspartate-semialdehyde dehydrogenase 4099 50.34 0 4011055..4011648 + 197 26250045 yhgN c4221 - dITP- and XTP- hydrolyzing protein 4100 50.62 0 4011694..4012989 - 431 26250046 - c4222 - putative DNA processing protein 4101 49.33 0 4012896..4014995 - 699 26250047 - c4223 - hypothetical protein 4102 55.63 0 4015133..4016473 - 446 26250048 gntU c4224 - low affinity gluconate transporter 4103 50.19 0 4016477..4017004 - 175 161486085 gntK c4225 - gluconate kinase 1 4104 48.82 0 4016531..4017163 + 210 26250050 - c4226 - hypothetical protein 4105 54.32 0 4017143..4018138 - 331 26250051 gntR c4227 - gluconate utilization system GNT-I transcriptional repressor 4106 51.72 0 4018231..4018926 - 231 26250052 yhhW c4228 - hypothetical protein 4107 51.16 0 4019049..4020086 - 345 26250053 yhhX c4229 - putative dehydrogenase 4108 46.54 0 4020033..4020191 + 52 26250054 - c4230 - hypothetical protein 4109 34.61 -2 4021144..4022322 + 392 26250055 yhhZ c4233 - hypothetical protein 4110 28.89 -2 4022319..4022813 + 164 26250056 yrhA c4234 - hypothetical protein 4111 45.26 0 4023263..4023547 + 94 26250057 yrhB c4235 - hypothetical protein 4112 53.58 0 4023585..4025318 - 577 26250058 ggt c4236 - gamma-glutamyltranspeptidase periplasmic precursor 4113 51.93 0 4025438..4025878 + 146 26250059 yhhA c4237 - hypothetical protein 4114 56.32 +1 4025865..4026608 - 247 26250060 ugpQ c4238 - cytoplasmic glycerophosphodiester phosphodiesterase 4115 57.33 +1 4026605..4027675 - 356 161486084 ugpC c4239 - glycerol-3-phosphate transporter ATP-binding subunit 4116 52.96 0 4027677..4028522 - 281 26250062 ugpE c4240 - glycerol-3-phosphate transporter membrane protein 4117 55.29 0 4028519..4029406 - 295 26250063 ugpA c4241 - glycerol-3-phosphate transporter permease 4118 52.62 0 4029504..4030820 - 438 26250064 ugpB c4242 - glycerol-3-phosphate transporter periplasmic binding protein 4119 42.42 -1 4031097..4031228 + 43 26250065 - c4243 - hypothetical protein 4120 56.86 +1 4031217..4031930 - 237 161486083 livF c4244 - leucine/isoleucine/valine transporter ATP-binding subunit 4121 53.91 0 4031932..4032699 - 255 26250067 livG c4245 - leucine/isoleucine/valine transporter ATP-binding subunit 4122 57.12 +1 4032696..4033973 - 425 26250068 livM c4246 - leucine/isoleucine/valine transporter permease subunit 4123 56.53 +1 4033970..4034896 - 308 26250069 livH c4247 - branched-chain amino acid transporter permease subunit LivH 4124 52.75 0 4034944..4036107 - 387 26250070 livK c4248 - leucine-specific binding protein precursor 4125 31.97 -2 4036080..4036226 + 48 26250071 - c4249 - hypothetical protein 4126 32.61 -2 4036205..4036342 - 45 26250072 - c4250 - hypothetical protein 4127 54.43 0 4036477..4036860 + 127 26250073 yhhK c4251 - hypothetical protein 4128 44.72 0 4036870..4036992 + 40 26250074 - c4252 - hypothetical protein 4129 54.44 0 4037048..4038208 - 386 26250075 livJ c4253 - Leu/Ile/Val-binding protein precursor 4130 53.45 0 4038422..4039276 - 284 26250076 rpoH c4254 - RNA polymerase factor sigma-32 4131 53.54 0 4039521..4040579 - 352 161486082 ftsX c4255 - cell division protein FtsX 4132 55.75 +1 4040572..4041240 - 222 26250078 ftsE c4256 - cell division protein FtsE 4133 53.04 0 4041243..4042739 - 498 26250079 ftsY c4257 - cell division protein FtsY 4134 54.10 0 4042889..4043485 + 198 26250080 yhhF c4258 - 16S rRNA m(2)G966-methyltransferase 4135 45.42 0 4043472..4043744 + 90 26250081 yhhL c4259 - hypothetical protein 4136 50.56 0 4043747..4044106 - 119 26250082 yhhM c4260 - hypothetical protein 4137 56.62 +1 4044247..4044873 + 208 26250083 yhhN c4261 - hypothetical protein 4138 57.75 +1 4044947..4047145 + 732 26250084 zntA c4262 - zinc/cadmium/mercury/lead-transporting ATPase 4139 50.81 0 4047406..4047651 - 81 26250085 yhhP c4263 - cell developmental protein SirA 4140 51.65 0 4047872..4048537 + 221 26250086 yhhQ c4264 - hypothetical protein 4141 51.25 0 4048610..4049167 + 185 161486081 - c4265 - hypothetical protein 4142 55.25 0 4049171..4050388 - 405 161486080 yhhS c4266 - hypothetical protein 4143 50.57 0 4050439..4051569 + 376 26250089 yhhT c4267 - hypothetical protein 4144 56.63 +1 4051624..4052211 + 195 26250090 yhhU c4268 - holo-(acyl carrier protein) synthase 2 4145 53.90 0 4052322..4053896 + 524 26250091 nikA c4269 - nickel-binding periplasmic protein precursor 4146 57.57 +1 4053896..4054840 + 314 26250092 nikB c4270 - nickel transporter permease NikB 4147 60.31 +1 4054837..4055670 + 277 26250093 nikC c4271 - nickel transporter permease NikC 4148 59.08 +1 4055670..4056434 + 254 26250094 nikD c4272 - nickel transporter ATP-binding protein 4149 57.50 +1 4056431..4057237 + 268 26250095 nikE c4273 - nickel transporter ATP-binding protein 4150 54.23 0 4057243..4057644 + 133 26250096 yhhG c4274 - nickel responsive regulator 4151 56.82 +1 4057486..4057617 - 43 26250097 - c4275 - hypothetical protein 4152 43.12 -1 4057834..4058589 + 251 26250098 - c4276 - putative regulator 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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