version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4019 54.48 0 3925399..3927942 + 847 26249965 nirB c4141 - nitrite reductase [NAD(P)H] large subunit 4020 55.05 0 3927939..3928265 + 108 26249966 nirD c4142 - nitrite reductase small subunit 4021 55.14 0 3928391..3929197 + 268 26249967 nirC c4143 - nitrite transporter NirC 4022 54.29 0 3929216..3930589 + 457 26249968 cysG c4144 - siroheme synthase 4023 43.45 -1 3930841..3931008 + 55 26249969 yhfL c4145 - hypothetical protein 4024 57.27 +1 3931116..3932201 - 361 26249970 yhfS c4146 - hypothetical protein 4025 52.49 0 3932213..3933517 - 434 26249971 yhfT c4147 - hypothetical protein 4026 46.82 0 3933529..3933921 - 130 26249972 yhfU c4148 - hypothetical protein 4027 52.79 0 3933893..3934771 - 292 26249973 yhfV c4149 - putative hydrolase 4028 54.28 0 3934768..3935994 - 408 26249974 yhfW c4150 - putative mutase 4029 54.30 0 3935995..3937158 - 387 26249975 yhfX c4151 - hypothetical protein 4030 50.12 0 3937242..3937646 - 134 26249976 yhfY c4152 - hypothetical protein 4031 51.59 0 3937621..3938469 - 282 26249977 yhfZ c4153 - hypothetical protein 4032 52.44 0 3938687..3939691 - 334 26249978 trpS c4154 - tryptophanyl-tRNA synthetase 4033 53.23 0 3939684..3940442 - 252 26249979 gph c4155 - phosphoglycolate phosphatase 4034 50.15 0 3940435..3941112 - 225 26249980 rpe c4156 - ribulose-phosphate 3-epimerase 4035 49.10 0 3941130..3941966 - 278 26249981 dam c4157 - DNA adenine methylase 4036 54.47 0 3942073..3943359 - 428 26249982 damX c4158 - hypothetical protein 4037 54.27 0 3943451..3944539 - 362 26249983 aroB c4159 - 3-dehydroquinate synthase 4038 49.23 0 3944596..3945117 - 173 161486094 aroK c4160 - shikimate kinase I 4039 53.83 0 3945518..3946756 - 412 26249985 hofQ c4161 - outer membrane porin HofQ 4040 52.48 0 3946668..3947111 - 147 26249986 yrfA c4162 - hypothetical protein 4041 54.20 0 3947062..3947502 - 146 26249987 yrfB c4163 - hypothetical protein 4042 54.07 0 3947486..3948025 - 179 26249988 yrfC c4164 - hypothetical protein 4043 56.51 +1 3948025..3948831 - 268 26249989 yrfD c4165 - hypothetical protein 4044 54.71 0 3948900..3951476 + 858 26249990 mrcA c4166 - peptidoglycan synthetase 4045 50.80 0 3951642..3952202 - 186 26249991 nudE c4167 - ADP-ribose diphosphatase NudE 4046 48.78 0 3952403..3952525 + 40 26249992 - c4168 - hypothetical protein 4047 52.57 0 3952522..3954657 + 711 26249993 yrfF c4169 - putative membrane protein igaA-like protein 4048 50.98 0 3954677..3955390 + 237 26249994 yrfG c4170 - hypothetical protein 4049 52.74 0 3955401..3955802 + 133 26249995 yrfH c4171 - ribosome-associated heat shock protein Hsp15 4050 53.01 0 3955827..3956705 + 292 161486093 hslO c4172 - Hsp33-like chaperonin 4051 49.45 0 3956843..3958567 - 574 26249997 yhgE c4173 - hypothetical protein 4052 33.33 -2 3958573..3958701 - 42 26249998 - c4174 - hypothetical protein 4053 34.85 -2 3958643..3958774 - 43 26249999 - c4175 - hypothetical protein 4054 53.90 0 3958877..3960568 + 563 26250000 pckA c4176 - phosphoenolpyruvate carboxykinase 4055 46.67 0 3960691..3960870 + 59 26250001 - c4177 - hypothetical protein 4056 37.25 -2 3960843..3960995 + 50 26250002 - c4178 - hypothetical protein 4057 45.12 0 3961054..3961350 + 98 26250003 - c4179 - hypothetical protein 4058 56.32 +1 3961381..3962733 - 450 26250004 envZ c4180 - osmolarity sensor protein 4059 55.00 0 3962730..3963449 - 239 26250005 ompR c4181 - osmolarity response regulator 4060 37.63 -2 3963539..3963724 - 61 26250006 - c4182 - hypothetical protein 4061 50.10 0 3963677..3964153 + 158 161486092 greB c4183 - transcription elongation factor GreB 4062 56.55 +1 3964250..3966571 + 773 26250008 yhgF c4184 - hypothetical protein 4063 48.25 0 3967027..3967254 + 75 26250009 feoA c4185 - ferrous iron transport protein A 4064 54.95 0 3967271..3969592 + 773 161486091 feoB c4186 - ferrous iron transport protein B 4065 51.63 0 3969583..3969828 + 81 26250011 yhgG c4187 - hypothetical protein 4066 47.47 0 3970061..3970654 + 197 26250012 yhgA c4188 - hypothetical protein 4067 56.03 +1 3970683..3971453 - 256 26250013 bioH c4189 - carboxylesterase BioH 4068 56.43 +1 3971491..3972174 + 227 161486090 yhgH c4190 - gluconate periplasmic binding protein 4069 52.78 0 3972233..3972808 + 191 26250015 yhgI c4191 - putative DNA uptake protein 4070 53.45 0 3973172..3974488 + 438 26250016 gntT c4192 - high-affinity gluconate transporter 4071 54.68 0 3974599..3976683 - 694 26250017 malQ c4193 - 4-alpha-glucanotransferase 4072 51.96 0 3976693..3979086 - 797 26250018 malP c4194 - maltodextrin phosphorylase 4073 37.41 -2 3979431..3979577 - 48 26250019 - c4195 - hypothetical protein 4074 53.95 0 3979709..3982414 + 901 26250020 malT c4196 - transcriptional regulator MalT 4075 59.51 +1 3982457..3983476 - 339 26250021 - c4197 - RNA 3'-terminal-phosphate cyclase 4076 50.16 0 3983477..3984766 - 429 26250022 rtcB c4198 - protein rtcB 4077 55.16 0 3984892..3986490 + 532 26250023 rtcR c4199 - transcriptional regulatory protein rtcR 4078 52.84 0 3986472..3987281 - 269 26250024 glpR c4200 - DNA-binding transcriptional repressor GlpR 4079 54.51 0 3987247..3988077 - 276 26250025 glpG c4201 - intramembrane serine protease GlpG 4080 54.43 0 3988122..3988448 - 108 161486089 glpE c4202 - thiosulfate sulfurtransferase 4081 55.11 0 3988638..3990143 + 501 161486088 glpD c4203 - glycerol-3-phosphate dehydrogenase 4082 42.24 -1 3990197..3990802 - 201 26250028 - c4204 - hypothetical protein 4083 45.57 0 3990805..3991572 - 255 26250029 - c4205 - hypothetical protein 4084 46.13 0 3991575..3992285 - 236 26250030 - c4206 - hypothetical protein 4085 38.48 -2 3992579..3993589 - 336 26250031 - c4207 - putative fimbrial adhesin precursor 4086 38.85 -2 3993608..3994405 - 265 26250032 - c4208 - putative fimbrial chaperone precursor 4087 35.66 -2 3994350..3994907 - 185 26250033 - c4209 - putative minor fimbrial subunit precursor 4088 40.18 -1 3994873..3995325 - 150 26250034 - c4210 - putative minor fimbrial subunit precursor 4089 35.19 -2 3995303..3995464 + 53 26250035 - c4211 - hypothetical protein 4090 41.97 -1 3995436..3998030 - 864 26250036 ycbS c4212 - outer membrane usher protein ycbS precursor 4091 38.21 -2 3998067..3998846 - 259 26250037 - c4213 - chaperone protein fimC precursor 4092 47.66 0 3998920..3999624 - 234 26250038 - c4214 - putative major fimbrial subunit precursor 4093 51.47 0 4000119..4002566 - 815 26250039 glgP c4215 - glycogen phosphorylase 4094 54.88 0 4002585..4004018 - 477 26250040 glgA c4216 - glycogen synthase 4095 52.78 0 4004018..4005313 - 431 161486087 glgC c4217 - glucose-1-phosphate adenylyltransferase 4096 53.95 0 4005331..4007304 - 657 26250042 glgX c4218 - glycogen debranching enzyme 4097 53.09 0 4007301..4009487 - 728 26250043 glgB c4219 - glycogen branching enzyme 4098 53.44 0 4009760..4010863 - 367 161486086 asd c4220 - aspartate-semialdehyde dehydrogenase 4099 50.34 0 4011055..4011648 + 197 26250045 yhgN c4221 - dITP- and XTP- hydrolyzing protein 4100 50.62 0 4011694..4012989 - 431 26250046 - c4222 - putative DNA processing protein 4101 49.33 0 4012896..4014995 - 699 26250047 - c4223 - hypothetical protein 4102 55.63 0 4015133..4016473 - 446 26250048 gntU c4224 - low affinity gluconate transporter 4103 50.19 0 4016477..4017004 - 175 161486085 gntK c4225 - gluconate kinase 1 4104 48.82 0 4016531..4017163 + 210 26250050 - c4226 - hypothetical protein 4105 54.32 0 4017143..4018138 - 331 26250051 gntR c4227 - gluconate utilization system GNT-I transcriptional repressor 4106 51.72 0 4018231..4018926 - 231 26250052 yhhW c4228 - hypothetical protein 4107 51.16 0 4019049..4020086 - 345 26250053 yhhX c4229 - putative dehydrogenase 4108 46.54 0 4020033..4020191 + 52 26250054 - c4230 - hypothetical protein 4109 34.61 -2 4021144..4022322 + 392 26250055 yhhZ c4233 - hypothetical protein 4110 28.89 -2 4022319..4022813 + 164 26250056 yrhA c4234 - hypothetical protein 4111 45.26 0 4023263..4023547 + 94 26250057 yrhB c4235 - hypothetical protein 4112 53.58 0 4023585..4025318 - 577 26250058 ggt c4236 - gamma-glutamyltranspeptidase periplasmic precursor 4113 51.93 0 4025438..4025878 + 146 26250059 yhhA c4237 - hypothetical protein 4114 56.32 +1 4025865..4026608 - 247 26250060 ugpQ c4238 - cytoplasmic glycerophosphodiester phosphodiesterase 4115 57.33 +1 4026605..4027675 - 356 161486084 ugpC c4239 - glycerol-3-phosphate transporter ATP-binding subunit 4116 52.96 0 4027677..4028522 - 281 26250062 ugpE c4240 - glycerol-3-phosphate transporter membrane protein 4117 55.29 0 4028519..4029406 - 295 26250063 ugpA c4241 - glycerol-3-phosphate transporter permease 4118 52.62 0 4029504..4030820 - 438 26250064 ugpB c4242 - glycerol-3-phosphate transporter periplasmic binding protein 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.