version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3630 51.21 0 3575207..3575866 + 219 26249574 yghB c3743 - hypothetical protein 3631 50.09 0 3575906..3577033 - 375 26249575 yqhC c3744 - putative transcriptional regulator YqhC 3632 54.55 0 3576999..3578162 + 387 26249576 yqhD c3745 - oxidoreductase yqhD 3633 50.72 0 3578267..3579094 + 275 26249577 dkgA c3746 - 2,5-diketo-D-gluconate reductase A 3634 47.40 0 3579568..3580221 + 217 26249578 yqhG c3747 - hypothetical protein 3635 48.45 0 3580272..3580529 + 85 26249579 yqhH c3748 - putative outer membrane lipoprotein 3636 54.41 0 3580571..3582790 - 739 26249580 - c3749 - hypothetical protein 3637 44.53 -1 3583042..3583791 + 249 26249581 - c3750 - putative regulator 3638 47.58 0 3584078..3585586 + 502 26249582 - c3751 - oxidoreductase ydfI 3639 47.59 0 3585583..3586599 + 338 26249583 - c3752 - hypothetical protein 3640 47.38 0 3586610..3587620 + 336 26249584 - c3753 - ureidoglycolate dehydrogenase 3641 42.07 -1 3587693..3588676 + 327 26249585 - c3754 - putative c4-dicarboxylate transport system binding protein 3642 38.30 -2 3588718..3589200 + 160 26249586 - c3755 - hypothetical protein 3643 45.95 0 3589169..3590515 + 448 26249587 ygiK c3756 - c4-dicarboxylate permease 3644 55.91 +1 3590586..3591998 - 470 26249588 sufI c3757 - repressor protein for FtsI 3645 49.73 0 3592073..3592810 - 245 26249589 plsC c3758 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3646 45.51 0 3592859..3593014 - 51 26249590 - c3759 - hypothetical protein 3647 54.80 0 3593045..3595303 - 752 26249591 parC c3760 - DNA topoisomerase IV subunit A 3648 51.83 0 3595441..3597111 - 556 26249592 - c3761 - putative binding protein 3649 53.00 0 3597157..3597639 - 160 26249593 ygiV c3762 - hypothetical protein 3650 48.44 0 3597692..3598141 - 149 26249594 ygiW c3763 - hypothetical protein 3651 52.27 0 3598236..3598895 + 219 26249595 ygiX c3764 - DNA-binding transcriptional regulator QseB 3652 52.52 0 3598892..3600241 + 449 26249596 ygiY c3765 - sensor protein QseC 3653 34.69 -2 3600626..3601363 - 245 26249597 - c3766 - hypothetical protein 3654 32.50 -2 3601339..3601818 - 159 26249598 - c3767 - hypothetical protein 3655 49.83 0 3602068..3602649 + 193 26249599 mdaB c3768 - modulator of drug activity B 3656 50.16 0 3602680..3602994 + 104 26249600 ygiN c3769 - hypothetical protein 3657 51.69 0 3603039..3603926 - 295 26249601 - c3770 - hypothetical protein 3658 48.66 0 3603923..3604933 - 336 26249602 - c3771 - iron ABC transporter substrate-binding protein 3659 50.10 0 3604881..3605930 - 349 26249603 - c3772 - iron ABC transporter permease 3660 54.47 0 3605927..3606910 - 327 26249604 - c3773 - iron ABC transporter permease 3661 49.14 0 3606907..3607716 - 269 26249605 - c3774 - ferric enterobactin transport ATP-binding protein fepC 3662 47.99 0 3608090..3610231 + 713 26249606 - c3775 - putative iron compound receptor 3663 53.62 0 3610295..3612187 - 630 26249607 parE c3776 - DNA topoisomerase IV subunit B 3664 54.12 0 3612216..3612797 - 193 26249608 yqiA c3777 - esterase YqiA 3665 56.76 +1 3612797..3613624 - 275 26249609 icc c3778 - cyclic 3',5'-adenosine monophosphate phosphodiesterase 3666 48.23 0 3613649..3614071 - 140 26249610 yqiB c3779 - hypothetical protein 3667 50.79 0 3614072..3614701 - 209 26249611 nudF c3780 - ADP-ribose pyrophosphatase NudF 3668 51.62 0 3614906..3616387 + 493 161486121 tolC c3781 - outer membrane channel protein 3669 52.87 0 3616387..3616647 + 86 26249613 ygiA c3782 - hypothetical protein 3670 56.25 +1 3616535..3617206 + 223 161486120 ygiB c3783 - hypothetical protein 3671 50.47 0 3617212..3618372 + 386 26249615 ygiC c3784 - hypothetical protein 3672 49.53 0 3618857..3620653 + 598 26249616 asst c3785 - arylsulfate sulfotransferase 3673 44.69 0 3620671..3621339 + 222 26249617 - c3786 - putative disulfide isomerase 3674 48.36 0 3621354..3622025 + 223 26249618 - c3787 - putative disulfide oxidoreductase 3675 53.19 0 3622071..3622886 - 271 26249619 ygiD c3788 - hypothetical protein 3676 52.94 0 3622960..3623775 + 271 26249620 ygiE c3789 - zinc transporter ZupT 3677 38.17 -2 3623837..3624022 - 61 26249621 - c3790 - hypothetical protein 3678 44.33 -1 3624578..3625141 + 187 26249622 ygiL c3791 - putative fimbrial protein 3679 46.77 0 3625228..3627750 + 840 26249623 yqiG c3792 - outer membrane usher protein yqiG precursor 3680 47.60 0 3627757..3628506 + 249 26249624 yqiH c3793 - fimbrial chaperone yqiH precursor 3681 40.95 -1 3628503..3629552 + 349 26249625 - c3794 - hypothetical protein 3682 53.06 0 3629606..3630259 - 217 26249626 ribB c3795 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 3683 49.17 0 3630573..3630932 + 119 26249627 yqiC c3796 - hypothetical protein 3684 43.00 -1 3630967..3631173 - 68 26249628 glgS c3797 - glycogen synthesis protein GlgS 3685 43.17 -1 3631437..3632066 + 209 26249629 yqiJ c3798 - hypothetical protein 3686 50.24 0 3632093..3633754 + 553 26249630 yqiK c3799 - hypothetical protein 3687 55.65 0 3634173..3635606 - 477 26249631 - c3800 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3688 55.79 +1 3635654..3638494 - 946 161486119 glnE c3801 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3689 54.85 0 3638517..3639845 - 442 26249633 ygiF c3802 - hypothetical protein 3690 46.14 0 3639888..3640340 - 150 26249634 - c3803 - putative transposase 3691 50.58 0 3640353..3641558 + 401 26249635 ydcM c3804 - hypothetical protein 3692 52.01 0 3641901..3642521 + 206 26249636 ygiM c3805 - putative signal transduction protein 3693 56.01 +1 3642585..3643823 + 412 26249637 cca c3806 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3694 52.85 0 3643903..3644727 - 274 26249638 uppP c3807 - undecaprenyl pyrophosphate phosphatase 3695 51.08 0 3644815..3645186 - 123 26249639 folB c3808 - bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 3696 53.40 0 3645288..3645905 + 205 26249640 ygiH c3809 - putative glycerol-3-phosphate acyltransferase PlsY 3697 49.03 0 3645918..3646898 - 326 26249641 ygiP c3810 - transcriptional activator TtdR 3698 35.77 -2 3646881..3647003 + 40 26249642 - c3811 - hypothetical protein 3699 53.29 0 3647057..3647968 + 303 26249643 ttdA c3812 - tartrate dehydratase subunit alpha 3700 53.63 0 3647965..3648570 + 201 26249644 ttdB c3813 - L(+)-tartrate dehydratase subunit beta 3701 54.58 0 3648618..3650081 + 487 26249645 ygjE c3814 - putative tartrate carrier/transporter 3702 56.41 +1 3650124..3651137 - 337 26249646 ygjD c3815 - O-sialoglycoprotein endopeptidase 3703 51.85 0 3651375..3651590 + 71 26249647 rpsU c3816 - 30S ribosomal protein S21 3704 52.35 0 3651701..3653446 + 581 26249648 dnaG c3817 - DNA primase 3705 53.66 0 3653460..3653582 + 40 26249649 - c3818 - hypothetical protein 3706 52.30 0 3653641..3654747 + 368 26249650 - c3819 - hypothetical protein 3707 53.83 0 3654441..3655538 - 365 26249651 - c3820 - hypothetical protein 3708 54.12 0 3654744..3655484 + 246 26249652 rpoD c3821 - RpoD protein 3709 53.65 0 3655562..3656068 - 168 26249653 ygjF c3822 - G/U mismatch-specific DNA glycosylase 3710 56.67 +1 3656322..3657101 - 259 26249654 yqjH c3823 - hypothetical protein 3711 53.53 0 3657374..3657997 + 207 26249655 yqjI c3824 - hypothetical protein 3712 55.10 0 3658151..3659671 - 506 26249656 aer c3825 - aerotaxis receptor 3713 38.76 -2 3659862..3659990 - 42 26249657 - c3826 - hypothetical protein 3714 46.86 0 3659947..3660153 + 68 26249658 - c3827 - hypothetical protein 3715 54.73 0 3660062..3661468 + 468 161486118 ygjG c3828 - putrescine--2-oxoglutarate aminotransferase 3716 51.09 0 3661452..3661862 + 136 26249660 - c3829 - hypothetical protein 3717 51.95 0 3661510..3661842 - 110 26249661 ygjH c3830 - hypothetical protein 3718 45.90 0 3661949..3662131 + 60 26249662 - c3831 - hypothetical protein 3719 51.12 0 3662061..3663044 + 327 26249663 ebgR c3832 - DNA-binding transcriptional repressor EbgR 3720 54.38 0 3663228..3666320 + 1030 161486117 ebgA c3833 - cryptic beta-D-galactosidase subunit alpha 3721 45.11 0 3666317..3666766 + 149 26249665 ebgC c3834 - cryptic beta-D-galactosidase subunit beta 3722 43.26 -1 3666617..3666757 - 46 26249666 - c3835 - hypothetical protein 3723 49.58 0 3666829..3668262 + 477 26249667 ygjI c3836 - putative transporter YgjI 3724 52.10 0 3668396..3669466 + 356 26249668 ygjJ c3837 - hypothetical protein 3725 54.38 0 3669483..3671834 + 783 26249669 ygjK c3838 - putative glycosyl hydrolase 3726 56.71 +1 3672060..3674078 + 672 26249670 ygjL c3839 - 2,4-dienoyl-CoA reductase 3727 48.44 0 3674123..3674539 - 138 26249671 - c3840 - hypothetical protein 3728 40.35 -1 3674536..3674706 - 56 26249672 - c3841 - hypothetical protein 3729 54.00 0 3674810..3675946 - 378 26249673 ygjO c3842 - putative ribosomal RNA small subunit methyltransferase D 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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