version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3324 55.36 0 3279990..3281183 - 397 26249265 ygeD c3430 - hypothetical protein 3325 52.41 0 3281176..3283335 - 719 26249266 aas c3431 - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 3326 46.61 0 3283735..3284073 - 112 26249267 - c3432 - transposase 3327 45.94 0 3284085..3284552 + 155 26249268 - c3433 - hypothetical protein 3328 53.00 0 3284632..3285663 + 343 26249269 galR c3434 - DNA-binding transcriptional regulator GalR 3329 52.81 0 3285670..3286932 - 420 26249270 lysA c3435 - diaminopimelate decarboxylase 3330 53.21 0 3287054..3287989 + 311 26249271 lysR c3436 - DNA-binding transcriptional regulator LysR 3331 50.65 0 3287976..3288668 - 230 26249272 ygeA c3437 - putative racemase 3332 50.65 0 3288797..3290344 - 515 26249273 araE c3438 - arabinose-proton symporter 3333 52.49 0 3290530..3291291 - 253 26249274 kduD c3439 - 2-deoxy-D-gluconate 3-dehydrogenase 3334 49.70 0 3291321..3292157 - 278 26249275 kduI c3440 - 5-keto-4-deoxyuronate isomerase 3335 52.96 0 3292444..3293625 - 393 161486135 yqeF c3441 - acetyl-CoA acetyltransferase 3336 44.47 -1 3293880..3295109 + 409 26249277 yqeG c3442 - putative transport protein YqeG 3337 50.00 0 3295578..3296357 - 259 26249278 ygeR c3443 - lipoprotein ygeR precursor 3338 52.52 0 3296747..3299044 + 765 26249279 - c3444 - xanthine dehydrogenase subunit XdhA 3339 53.92 0 3299055..3299933 + 292 26249280 ygeT c3445 - xanthine dehydrogenase subunit XdhB 3340 50.83 0 3299930..3300409 + 159 26249281 - c3446 - xanthine dehydrogenase subunit XdhC 3341 45.92 0 3300449..3302227 - 592 26249282 ygeV c3447 - putative sigma-54-dependent transcriptional regulator ygeV 3342 50.04 0 3302703..3303893 + 396 26249283 ygeW c3448 - hypothetical protein 3343 53.22 0 3303951..3305147 + 398 26249284 ygeX c3449 - diaminopropionate ammonia-lyase 3344 50.66 0 3305205..3306416 + 403 26249285 ygeY c3450 - peptidase 3345 52.60 0 3306470..3307855 + 461 161486134 ygeZ c3451 - dihydropyrimidinase 3346 49.62 0 3307903..3308835 + 310 26249287 yqeA c3452 - carbamate kinase 3347 52.21 0 3308876..3310501 - 541 26249288 yqeB c3453 - hypothetical protein 3348 49.03 0 3310549..3311319 - 256 26249289 yqeC c3454 - hypothetical protein 3349 43.18 -1 3311423..3312001 + 192 26249290 ygfJ c3455 - hypothetical protein 3350 52.53 0 3312323..3315421 + 1032 26249291 ygfK c3456 - putative selenate reductase subunit YgfK 3351 52.75 0 3315424..3316752 + 442 161486133 - c3457 - putative chlorohydrolase/aminohydrolase 3352 53.72 0 3316803..3317582 + 259 26249293 ygfM c3458 - putative selenate reductase subunit YgfM 3353 52.80 0 3317579..3320449 + 956 26249294 - c3459 - putative selenate reductase subunit YgfN 3354 48.01 0 3320557..3322014 + 485 26249295 ygfO c3460 - putative purine permease ygfO 3355 47.99 0 3321909..3323348 + 479 26249296 ygfP c3461 - guanine deaminase 3356 53.22 0 3323384..3324751 + 455 26249297 - c3462 - hypothetical protein 3357 54.88 0 3324787..3325278 - 163 26249298 ygfS c3463 - putative electron transport protein ygfS 3358 52.76 0 3325275..3327209 - 644 26249299 ygfT c3464 - putative oxidoreductase Fe-S binding subunit 3359 49.43 0 3327501..3329078 + 525 26249300 ygfU c3465 - putative purine permease ygfU 3360 35.42 -2 3329062..3329205 + 47 26249301 - c3466 - hypothetical protein 3361 49.91 0 3329328..3329876 + 182 26249302 - c3467 - isopentenyl-diphosphate delta-isomerase 3362 46.08 0 3329981..3330490 - 169 26249303 - c3468 - hypothetical protein 3363 52.57 0 3330630..3332147 - 505 26249304 lysS c3469 - lysyl-tRNA synthetase 3364 52.33 0 3330747..3332162 + 471 26249305 - c3470 - hypothetical protein 3365 53.41 0 3332157..3333255 - 365 26249306 prfB c5622 - peptide chain release factor 2 3366 56.34 +1 3333346..3335079 - 577 26249307 recJ c3472 - ssDNA exonuclease RecJ 3367 48.24 0 3335085..3335795 - 236 26249308 dsbC c3473 - thiol:disulfide interchange protein DsbC 3368 53.29 0 3335820..3336716 - 298 26249309 xerD c3474 - site-specific tyrosine recombinase XerD 3369 51.72 0 3336828..3337349 + 173 26249310 fldB c3475 - flavodoxin FldB 3370 53.92 0 3337389..3337796 - 135 26249311 ygfX c3476 - hypothetical protein 3371 49.06 0 3337777..3338043 - 88 26249312 ygfY c3477 - hypothetical protein 3372 43.23 -1 3338018..3338209 + 63 26249313 - c3478 - hypothetical protein 3373 54.13 0 3338286..3339266 + 326 26249314 ygfZ c3479 - putative global regulator 3374 52.12 0 3339343..3340002 - 219 26249315 yqfA c3480 - hypothetical protein 3375 44.87 0 3340166..3340477 - 103 26249316 yqfB c3481 - hypothetical protein 3376 51.17 0 3340498..3341955 + 485 26249317 bglA c3482 - 6-phospho-beta-glucosidase BglA 3377 55.46 0 3342121..3344994 - 957 26249318 gcvP c3483 - glycine dehydrogenase 3378 51.40 0 3345112..3345504 - 130 26249319 gcvH c3484 - glycine cleavage system protein H 3379 53.97 0 3345525..3346619 - 364 26249320 gcvT c3485 - glycine cleavage system aminomethyltransferase T 3380 45.51 0 3346627..3346782 - 51 26249321 - c3486 - hypothetical protein 3381 23.33 -2 3346795..3346944 - 49 26249322 - c3487 - hypothetical protein 3382 54.70 0 3347067..3348269 - 400 26249323 visC c3488 - hypothetical protein 3383 59.03 +1 3348292..3349470 - 392 26249324 ubiH c3489 - 2-octaprenyl-6-methoxyphenyl hydroxylase 3384 52.11 0 3349467..3350792 - 441 26249325 pepP c3490 - proline aminopeptidase P II 3385 52.68 0 3350818..3351396 - 192 161486132 ygfB c3491 - hypothetical protein 3386 46.67 0 3351564..3351893 + 109 26249327 ygfE c3492 - Z-ring-associated protein 3387 52.07 0 3351995..3352741 + 248 26249328 ygfA c3493 - putative ligase 3388 52.47 0 3353131..3354363 - 410 26249329 serA c3494 - D-3-phosphoglycerate dehydrogenase 3389 50.55 0 3354619..3355350 - 243 26249330 rpiA c3495 - ribose-5-phosphate isomerase A 3390 54.48 0 3355334..3355612 - 92 26249331 yqfE c3496 - hypothetical protein 3391 54.47 0 3355705..3356598 + 297 161486131 iciA c3497 - chromosome replication initiation inhibitor protein 3392 52.65 0 3356801..3357856 + 351 26249333 - c3498 - hypothetical protein 3393 44.48 -1 3357853..3358749 - 298 26249334 ygfI c3499 - putative transcriptional regulator YgfI 3394 52.50 0 3358907..3359647 - 246 26249335 yggE c3500 - hypothetical protein 3395 50.47 0 3359740..3360375 - 211 26249336 yggA c3501 - arginine exporter protein 3396 50.52 0 3360514..3361374 - 286 26249337 yggB c3502 - mechanosensitive channel MscS 3397 51.02 0 3361565..3362644 - 359 161486130 fba c3503 - fructose-bisphosphate aldolase 3398 51.43 0 3362858..3364084 - 408 26249339 pgk c3504 - phosphoglycerate kinase 3399 51.37 0 3364071..3365090 - 339 161486129 epd c3505 - erythrose 4-phosphate dehydrogenase 3400 56.18 +1 3365462..3365890 + 142 26249341 - c3506 - hypothetical protein 3401 56.82 +1 3365917..3366495 + 192 26249342 - c3507 - hypothetical protein 3402 56.21 +1 3366496..3367203 + 235 26249343 - c3508 - hypothetical protein 3403 56.24 +1 3367332..3367868 + 178 26249344 - c3509 - ABC transporter ATP-binding protein 3404 52.74 0 3367829..3368539 + 236 26249345 - c3510 - ABC transporter ATP-binding protein 3405 52.38 0 3368511..3369224 - 237 26249346 frcK c3511 - putative fructose transport system kinase 3406 48.82 0 3369221..3369730 - 169 26249347 yggD c3512 - putative DNA-binding transcriptional regulator 3407 55.56 0 3369879..3370067 - 62 26249348 - c3513 - hypothetical protein 3408 51.25 0 3370064..3371341 - 425 26249349 - c3514 - putative oxidoreductase 3409 49.75 0 3371356..3372744 - 462 26249350 cmtA c3515 - PTS system, mannitol (Cryptic)-specific IIBC component 3410 42.12 -1 3372772..3373215 - 147 26249351 cmtB c3516 - putative mannitol phosphotransferase subunit EIIA 3411 46.94 0 3373532..3374266 + 244 26249352 - c3517 - hypothetical protein 3412 55.92 +1 3374714..3376705 - 663 161486128 tktA c3520 - transketolase 3413 51.74 0 3376764..3377741 + 325 26249356 yggG c3521 - putative metalloprotease yggG 3414 55.48 0 3377945..3378865 - 306 26249357 speB c3522 - agmatinase 3415 48.36 0 3379001..3379732 - 243 26249358 - c3523 - hypothetical protein 3416 54.85 0 3379878..3381866 - 662 26249359 speA c3524 - arginine decarboxylase 3417 39.46 -1 3381863..3382009 - 48 26249360 yqgB c3525 - hypothetical protein 3418 41.27 -1 3382329..3382454 + 41 26249361 - c3526 - hypothetical protein 3419 42.32 -1 3382342..3382608 - 88 26249362 yqgD c3527 - hypothetical protein 3420 53.33 0 3382649..3383803 + 384 161486127 metK c3528 - S-adenosylmethionine synthetase 3421 53.23 0 3384227..3385633 + 468 26249364 galP c3529 - galactose-proton symporter 3422 55.07 0 3385656..3386207 + 183 26249365 sprT c3530 - hypothetical protein 3423 53.45 0 3386299..3387009 + 236 26249366 endA c3531 - endonuclease I precursor 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.