version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3284 61.52 +2 3227152..3228804 + 550 26249224 - c3389 - hypothetical protein 3285 50.91 0 3228841..3229443 - 200 26249225 - c3390 - hypothetical protein 3286 51.22 0 3228862..3229353 + 163 26249226 - c3391 - secreted protein Hcp 3287 60.33 +1 3229545..3232181 + 878 26249227 - c3392 - ClpB protein 3288 55.56 0 3232181..3234655 + 824 26249228 - c3393 - hypothetical protein 3289 46.79 0 3234670..3235494 + 274 26249229 - c3394 - hypothetical protein 3290 50.38 0 3235491..3237467 + 658 26249230 - c3395 - hypothetical protein 3291 49.45 0 3237477..3237749 + 90 26249231 - c3396 - hypothetical protein 3292 51.53 0 3237749..3239182 + 477 26249232 - c3397 - hypothetical protein 3293 59.87 +1 3239189..3242527 + 1112 26249233 - c3398 - hypothetical protein 3294 62.39 +2 3242493..3244130 + 545 26249234 - c3399 - hypothetical protein 3295 58.04 +1 3244161..3246965 + 934 26249235 - c3400 - hypothetical protein 3296 50.84 0 3246946..3247482 + 178 26249236 - c3401 - hypothetical protein 3297 53.38 0 3247486..3247914 + 142 26249237 - c3402 - hypothetical protein 3298 54.97 0 3247914..3249290 + 458 26249238 - c3403 - hypothetical protein 3299 52.94 0 3248464..3248616 - 50 26249239 - c3404 - hypothetical protein 3300 44.72 0 3249590..3250546 - 318 26249240 - c3405 - 2-hydroxyacid dehydrogenase 3301 41.37 -1 3250609..3251205 - 198 26249241 - c3406 - phosphosugar isomerase 3302 37.67 -2 3251208..3252383 - 391 26249242 - c3407 - Beta-cystathionase 3303 44.40 -1 3252383..3253963 - 526 26249243 - c3408 - PTS system, maltose and glucose-specific IIABC component 3304 34.13 -2 3253995..3254876 - 293 26249244 - c3409 - antiterminator 3305 32.68 -2 3254915..3255067 + 50 26249245 - c3410 - hypothetical protein 3306 52.90 0 3255077..3256420 - 447 26249246 - c3411 - N-acetylmuramoyl-L-alanine amidase amiC precursor 3307 52.55 0 3256562..3257893 + 443 161486136 argA c3412 - N-acetylglutamate synthase 3308 55.12 0 3257955..3259781 - 608 26249248 RecD c3413 - exonuclease V subunit alpha 3309 54.05 0 3259781..3263332 - 1183 26249249 RecB c3414 - exonuclease V subunit beta 3310 50.78 0 3263316..3266204 - 962 26249250 ptr c3415 - protease III 3311 53.31 0 3266380..3269748 - 1122 26249251 recC c3416 - exonuclease V subunit gamma 3312 54.63 0 3269761..3270084 - 107 26249252 ppdC c3417 - hypothetical protein 3313 53.19 0 3270069..3270476 - 135 26249253 ygdB c3418 - hypothetical protein 3314 52.38 0 3270473..3271060 - 195 26249254 ppdB c3419 - hypothetical protein 3315 54.35 0 3271027..3271497 - 156 26249255 ppdA c3420 - hypothetical protein 3316 51.19 0 3271682..3272476 - 264 26249257 thyA c3422 - thymidylate synthase 3317 52.63 0 3272483..3273358 - 291 26249258 lgt c3423 - prolipoprotein diacylglyceryl transferase 3318 53.76 0 3273509..3275755 - 748 26249259 ptsP c3424 - fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 3319 49.15 0 3275768..3276298 - 176 26249260 ygdP c3425 - dinucleoside polyphosphate hydrolase 3320 53.62 0 3276983..3277672 + 229 26249261 mutH c3426 - DNA mismatch repair protein 3321 50.84 0 3277741..3278454 + 237 26249262 - c3427 - hypothetical protein 3322 43.38 -1 3278592..3278810 + 72 26249263 ygdR c3428 - lipoprotein ygdR precursor 3323 54.56 0 3278918..3279958 + 346 26249264 - c3429 - putative aldo-keto reductase 3324 55.36 0 3279990..3281183 - 397 26249265 ygeD c3430 - hypothetical protein 3325 52.41 0 3281176..3283335 - 719 26249266 aas c3431 - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 3326 46.61 0 3283735..3284073 - 112 26249267 - c3432 - transposase 3327 45.94 0 3284085..3284552 + 155 26249268 - c3433 - hypothetical protein 3328 53.00 0 3284632..3285663 + 343 26249269 galR c3434 - DNA-binding transcriptional regulator GalR 3329 52.81 0 3285670..3286932 - 420 26249270 lysA c3435 - diaminopimelate decarboxylase 3330 53.21 0 3287054..3287989 + 311 26249271 lysR c3436 - DNA-binding transcriptional regulator LysR 3331 50.65 0 3287976..3288668 - 230 26249272 ygeA c3437 - putative racemase 3332 50.65 0 3288797..3290344 - 515 26249273 araE c3438 - arabinose-proton symporter 3333 52.49 0 3290530..3291291 - 253 26249274 kduD c3439 - 2-deoxy-D-gluconate 3-dehydrogenase 3334 49.70 0 3291321..3292157 - 278 26249275 kduI c3440 - 5-keto-4-deoxyuronate isomerase 3335 52.96 0 3292444..3293625 - 393 161486135 yqeF c3441 - acetyl-CoA acetyltransferase 3336 44.47 -1 3293880..3295109 + 409 26249277 yqeG c3442 - putative transport protein YqeG 3337 50.00 0 3295578..3296357 - 259 26249278 ygeR c3443 - lipoprotein ygeR precursor 3338 52.52 0 3296747..3299044 + 765 26249279 - c3444 - xanthine dehydrogenase subunit XdhA 3339 53.92 0 3299055..3299933 + 292 26249280 ygeT c3445 - xanthine dehydrogenase subunit XdhB 3340 50.83 0 3299930..3300409 + 159 26249281 - c3446 - xanthine dehydrogenase subunit XdhC 3341 45.92 0 3300449..3302227 - 592 26249282 ygeV c3447 - putative sigma-54-dependent transcriptional regulator ygeV 3342 50.04 0 3302703..3303893 + 396 26249283 ygeW c3448 - hypothetical protein 3343 53.22 0 3303951..3305147 + 398 26249284 ygeX c3449 - diaminopropionate ammonia-lyase 3344 50.66 0 3305205..3306416 + 403 26249285 ygeY c3450 - peptidase 3345 52.60 0 3306470..3307855 + 461 161486134 ygeZ c3451 - dihydropyrimidinase 3346 49.62 0 3307903..3308835 + 310 26249287 yqeA c3452 - carbamate kinase 3347 52.21 0 3308876..3310501 - 541 26249288 yqeB c3453 - hypothetical protein 3348 49.03 0 3310549..3311319 - 256 26249289 yqeC c3454 - hypothetical protein 3349 43.18 -1 3311423..3312001 + 192 26249290 ygfJ c3455 - hypothetical protein 3350 52.53 0 3312323..3315421 + 1032 26249291 ygfK c3456 - putative selenate reductase subunit YgfK 3351 52.75 0 3315424..3316752 + 442 161486133 - c3457 - putative chlorohydrolase/aminohydrolase 3352 53.72 0 3316803..3317582 + 259 26249293 ygfM c3458 - putative selenate reductase subunit YgfM 3353 52.80 0 3317579..3320449 + 956 26249294 - c3459 - putative selenate reductase subunit YgfN 3354 48.01 0 3320557..3322014 + 485 26249295 ygfO c3460 - putative purine permease ygfO 3355 47.99 0 3321909..3323348 + 479 26249296 ygfP c3461 - guanine deaminase 3356 53.22 0 3323384..3324751 + 455 26249297 - c3462 - hypothetical protein 3357 54.88 0 3324787..3325278 - 163 26249298 ygfS c3463 - putative electron transport protein ygfS 3358 52.76 0 3325275..3327209 - 644 26249299 ygfT c3464 - putative oxidoreductase Fe-S binding subunit 3359 49.43 0 3327501..3329078 + 525 26249300 ygfU c3465 - putative purine permease ygfU 3360 35.42 -2 3329062..3329205 + 47 26249301 - c3466 - hypothetical protein 3361 49.91 0 3329328..3329876 + 182 26249302 - c3467 - isopentenyl-diphosphate delta-isomerase 3362 46.08 0 3329981..3330490 - 169 26249303 - c3468 - hypothetical protein 3363 52.57 0 3330630..3332147 - 505 26249304 lysS c3469 - lysyl-tRNA synthetase 3364 52.33 0 3330747..3332162 + 471 26249305 - c3470 - hypothetical protein 3365 53.41 0 3332157..3333255 - 365 26249306 prfB c5622 - peptide chain release factor 2 3366 56.34 +1 3333346..3335079 - 577 26249307 recJ c3472 - ssDNA exonuclease RecJ 3367 48.24 0 3335085..3335795 - 236 26249308 dsbC c3473 - thiol:disulfide interchange protein DsbC 3368 53.29 0 3335820..3336716 - 298 26249309 xerD c3474 - site-specific tyrosine recombinase XerD 3369 51.72 0 3336828..3337349 + 173 26249310 fldB c3475 - flavodoxin FldB 3370 53.92 0 3337389..3337796 - 135 26249311 ygfX c3476 - hypothetical protein 3371 49.06 0 3337777..3338043 - 88 26249312 ygfY c3477 - hypothetical protein 3372 43.23 -1 3338018..3338209 + 63 26249313 - c3478 - hypothetical protein 3373 54.13 0 3338286..3339266 + 326 26249314 ygfZ c3479 - putative global regulator 3374 52.12 0 3339343..3340002 - 219 26249315 yqfA c3480 - hypothetical protein 3375 44.87 0 3340166..3340477 - 103 26249316 yqfB c3481 - hypothetical protein 3376 51.17 0 3340498..3341955 + 485 26249317 bglA c3482 - 6-phospho-beta-glucosidase BglA 3377 55.46 0 3342121..3344994 - 957 26249318 gcvP c3483 - glycine dehydrogenase 3378 51.40 0 3345112..3345504 - 130 26249319 gcvH c3484 - glycine cleavage system protein H 3379 53.97 0 3345525..3346619 - 364 26249320 gcvT c3485 - glycine cleavage system aminomethyltransferase T 3380 45.51 0 3346627..3346782 - 51 26249321 - c3486 - hypothetical protein 3381 23.33 -2 3346795..3346944 - 49 26249322 - c3487 - hypothetical protein 3382 54.70 0 3347067..3348269 - 400 26249323 visC c3488 - hypothetical protein 3383 59.03 +1 3348292..3349470 - 392 26249324 ubiH c3489 - 2-octaprenyl-6-methoxyphenyl hydroxylase 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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