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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3147 51.94 0 3096814..3097329 - 171 26249086 ygaG c3244 - S-ribosylhomocysteinase 3148 51.57 0 3097479..3099035 - 518 26249087 gshA c3245 - glutamate--cysteine ligase 3149 49.18 0 3099108..3099536 - 142 26249088 yqaA c3246 - hypothetical protein 3150 54.32 0 3099533..3100099 - 188 26249089 yqaB c3247 - fructose-1-phosphatase 3151 32.54 -2 3100129..3100254 - 41 26249090 - c3248 - hypothetical protein 3152 49.46 0 3101427..3101612 - 61 26249091 csrA c3249 - carbon storage regulator 3153 50.88 0 3104383..3104553 + 56 26249092 - c3251 - hypothetical protein 3154 51.70 0 3104607..3105107 - 166 26249093 recX c3252 - recombination regulator RecX 3155 53.86 0 3105176..3106237 - 353 26249094 recA c3253 - recombinase A 3156 56.09 +1 3106317..3106817 - 166 26249095 ygaD c3254 - competence damage-inducible protein A 3157 54.83 0 3106959..3108149 - 396 26249096 mltB c3255 - murein hydrolase B 3158 49.29 0 3108301..3108864 + 187 26249097 srlA c3256 - PTS system, glucitol/sorbitol-specific IIC2 component 3159 55.10 0 3108861..3109820 + 319 26249098 srlE c3257 - PTS system, glucitol/sorbitol-specific IIBC component 3160 55.65 0 3109831..3110202 + 123 26249099 srlB c3258 - glucitol/sorbitol-specific PTS system component IIA 3161 53.46 0 3110206..3110985 + 259 26249100 srlD c3259 - sorbitol-6-phosphate dehydrogenase 3162 53.89 0 3111091..3111450 + 119 26249101 gutM c3260 - DNA-binding transcriptional activator GutM 3163 48.58 0 3111517..3112290 + 257 26249102 srlR c3261 - DNA-bindng transcriptional repressor SrlR 3164 56.83 +1 3112283..3113248 + 321 26249103 gutQ c3262 - D-arabinose 5-phosphate isomerase 3165 56.57 +1 3113245..3114759 - 504 161486138 ygaA c3263 - anaerobic nitric oxide reductase transcription regulator 3166 50.29 0 3114916..3115959 - 347 26249105 - c3264 - hypothetical protein 3167 54.23 0 3116383..3117516 + 377 26249106 ygbD c3267 - nitric oxide reductase 3168 57.94 +1 3117740..3120064 - 774 26249107 hypF c3268 - hydrogenase maturation protein hypF 3169 52.12 0 3120145..3120687 - 180 26249108 hydN c3269 - electron transport protein HydN 3170 45.70 0 3120766..3120951 - 61 26249109 - c3270 - hypothetical protein 3171 42.42 -1 3121057..3121485 + 142 26249110 - c3271 - hypothetical protein 3172 46.03 0 3121448..3121573 - 41 26249111 - c3272 - hypothetical protein 3173 46.43 0 3121577..3121996 - 139 26249112 - c3273 - hypothetical protein 3174 41.99 -1 3121993..3122304 - 103 26249113 - c3274 - hypothetical protein 3175 40.62 -1 3122041..3122232 + 63 26249114 - c3275 - hypothetical protein 3176 49.10 0 3122467..3123240 - 257 26249115 - c3276 - hypothetical protein 3177 54.35 0 3123265..3123735 - 156 26249116 hycI c3277 - hydrogenase 3 maturation protease 3178 52.80 0 3123728..3124138 - 136 26249117 hycH c3278 - formate hydrogenlyase maturation protein hycH 3179 57.55 +1 3124135..3124902 - 255 26249118 hycG c3279 - formate hydrogenlyase subunit 7 3180 55.62 0 3124902..3125444 - 180 26249119 hycF c3280 - formate hydrogenlyase complex iron-sulfur subunit 3181 56.43 +1 3125454..3127163 - 569 26249120 hycE c3281 - formate hydrogenlyase subunit 5 precursor 3182 58.23 +1 3127181..3128104 - 307 26249121 hycD c3282 - formate hydrogenlyase subunit 4 3183 57.74 +1 3128107..3129933 - 608 26249122 hycC c3283 - formate hydrogenlyase subunit 3 3184 55.39 0 3129930..3130541 - 203 26249123 hycB c3284 - formate hydrogenlyase subunit 2 3185 49.57 0 3130666..3131127 - 153 26249124 hycA c3285 - formate hydrogenlyase regulatory protein HycA 3186 52.89 0 3131327..3131689 + 120 26249125 hypA c3286 - hydrogenase nickel incorporation protein 3187 55.67 0 3131693..3132565 + 290 26249126 hypB c3287 - hydrogenase nickel incorporation protein HypB 3188 54.21 0 3132556..3132828 + 90 26249127 hypC c3288 - hydrogenase isoenzymes formation protein 3189 54.99 0 3132828..3133949 + 373 26249128 hypD c3289 - hydrogenase isoenzyme formation protein hypD 3190 57.07 +1 3133946..3134956 + 336 26249129 hypE c3290 - hydrogenase isoenzyme formation protein hypE 3191 51.82 0 3134994..3137108 + 704 26249130 fhlA c3291 - formate hydrogenlyase transcriptional activator 3192 50.00 0 3137114..3137581 + 155 26249131 - c3292 - molybdenum-pterin-binding-protein 3193 50.14 0 3137620..3137964 - 114 26249132 ygbA c3293 - hypothetical protein 3194 55.50 0 3138250..3140811 + 853 26249133 mutS c3294 - DNA mismatch repair protein 3195 42.62 -1 3140917..3141573 + 218 26249134 pphB c3295 - serine/threonine-specific protein phosphatase 2 3196 51.75 0 3141624..3142421 - 265 26249135 ygbI c3296 - putative transcriptional regulator YgbI 3197 53.69 0 3142587..3143495 + 302 26249136 ygbJ c3297 - oxidoreductase ygbJ 3198 54.87 0 3143492..3144754 + 420 26249137 ygbK c3298 - hypothetical protein 3199 52.74 0 3144751..3145389 + 212 26249138 ygbL c3299 - putative aldolase 3200 52.25 0 3145394..3146170 + 258 26249139 ygbM c3300 - hypothetical protein 3201 51.65 0 3146259..3147623 + 454 26249140 ygbN c3301 - inner membrane permease YgbN 3202 38.89 -2 3147766..3148809 - 347 26249141 - c3302 - hypothetical protein 3203 27.21 -2 3148828..3148974 + 48 26249142 - c3303 - hypothetical protein 3204 49.28 0 3149034..3149585 + 183 26249143 - c3304 - hypothetical protein 3205 51.99 0 3149703..3150329 + 208 26249144 - c3305 - hypothetical protein 3206 52.60 0 3149763..3150281 - 172 26249145 - c3306 - hypothetical protein 3207 51.26 0 3150362..3150796 - 144 26249146 - c3307 - hypothetical protein 3208 52.54 0 3150823..3151962 - 379 26249147 nlpD c3308 - lipoprotein NlpD 3209 52.98 0 3151820..3151987 + 55 26249148 - c3309 - hypothetical protein 3210 53.43 0 3152102..3152728 - 208 26249149 pcm c3310 - protein-L-isoaspartate O-methyltransferase 3211 54.15 0 3152722..3153528 - 268 26249150 surE c3311 - stationary phase survival protein SurE 3212 51.81 0 3153464..3154513 - 349 26249151 truD c3312 - tRNA pseudouridine synthase D 3213 54.37 0 3154510..3154989 - 159 26249152 ispF c3313 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3214 55.98 +1 3154989..3155699 - 236 26249153 ispD c3314 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3215 51.28 0 3155718..3156029 - 103 26249154 ftsB c3315 - cell division protein FtsB 3216 47.84 0 3156222..3156545 - 107 26249155 ygbE c3316 - hypothetical protein 3217 51.82 0 3156597..3157202 - 201 26249156 cysC c3317 - adenylylsulfate kinase 3218 54.41 0 3157202..3158629 - 475 26249157 cysN c3318 - sulfate adenylyltransferase subunit 1 3219 53.47 0 3158631..3159539 - 302 26249158 cysD c3319 - sulfate adenylyltransferase subunit 2 3220 49.13 0 3159791..3160828 + 345 26249159 iap c3320 - alkaline phosphatase isozyme conversion aminopeptidase 3221 51.16 0 3161370..3162104 - 244 26249160 cysH c3321 - phosphoadenosine phosphosulfate reductase 3222 55.87 +1 3162178..3163890 - 570 26249161 cysI c3322 - sulfite reductase subunit beta 3223 56.33 +1 3163890..3165689 - 599 26249162 cysJ c3323 - sulfite reductase subunit alpha 3224 47.56 0 3165921..3166370 + 149 26249163 ygcM c3324 - putative 6-pyruvoyl tetrahydrobiopterin synthase 3225 55.76 +1 3166418..3167719 + 433 26249164 ygcN c3325 - electron transfer flavoprotein-quinone oxidoreductase ygcN 3226 56.23 +1 3167674..3167970 + 98 26249165 ygcO c3326 - ferredoxin-like protein ygcO 3227 54.92 0 3168711..3169604 - 297 26249166 ygcQ c3328 - putative electron transfer flavoprotein subunit ygcQ 3228 56.07 +1 3169568..3170350 - 260 26249167 ygcR c3329 - putative electron transfer flavoprotein subunit ygcR 3229 53.40 0 3170322..3171731 - 469 26249168 ygcS c3330 - metabolite transport protein 3230 50.79 0 3171753..3173207 - 484 26249169 - c3331 - hypothetical protein 3231 45.18 0 3173277..3174137 - 286 26249170 ygcW c3332 - oxidoreductase ygcW 3232 49.14 0 3174381..3175658 + 425 26249171 yqcE c3333 - hypothetical protein 3233 49.22 0 3175685..3177163 + 492 26249172 ygcE c3334 - putative sugar kinase ygcE 3234 50.89 0 3177637..3178308 - 223 26249173 ygcF c3335 - hypothetical protein 3235 34.92 -2 3178342..3178467 + 41 26249174 - c3336 - hypothetical protein 3236 41.13 -1 3178481..3179083 + 200 26249175 - c3337 - hypothetical protein 3237 47.19 0 3179067..3179990 + 307 26249176 - c3338 - hypothetical protein 3238 48.45 0 3179594..3179884 - 96 26249177 - c3339 - hypothetical protein 3239 45.89 0 3180005..3181159 + 384 26249178 - c3340 - hypothetical protein 3240 43.95 -1 3181153..3182037 + 294 26249180 ygcG c3342 - hypothetical protein 3241 50.57 0 3182052..3183281 + 409 26249181 - c3343 - hypothetical protein 3242 50.81 0 3182097..3183395 - 432 26249182 eno c3344 - phosphopyruvate hydratase 3243 51.77 0 3183483..3185120 - 545 26249183 pyrG c3345 - CTP synthetase 3244 51.26 0 3185348..3186139 - 263 26249184 mazG c3346 - nucleoside triphosphate pyrophosphohydrolase 3245 53.69 0 3186235..3188469 - 744 26249185 relA c3347 - GDP/GTP pyrophosphokinase 3246 51.00 0 3188517..3189818 - 433 26249186 rumA c3348 - 23S rRNA 5-methyluridine methyltransferase 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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