version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3088 48.36 0 3052649..3052861 + 70 26249027 cspF c3185 - cold shock-like protein cspF 3089 48.02 0 3053277..3054059 - 260 26249028 - c3186 - lambdoid prophage Qin antitermination protein Q 3090 55.42 0 3054043..3055038 - 331 26249029 - c3187 - hypothetical protein 3091 50.25 0 3055040..3055837 - 265 26249030 - c3188 - hypothetical protein 3092 56.67 +1 3055857..3056246 - 129 26249031 - c3189 - hypothetical protein 3093 55.56 0 3056243..3056602 - 119 26249032 - c3190 - hypothetical protein 3094 54.55 0 3056569..3057063 - 164 26249033 yfdN c3191 - hypothetical protein 3095 52.76 0 3057060..3058001 - 313 26249034 - c3192 - hypothetical protein 3096 46.43 0 3057572..3057739 + 55 26249035 - c3193 - hypothetical protein 3097 46.99 0 3057578..3057760 - 60 26249036 - c3194 - hypothetical protein 3098 48.93 0 3058346..3058954 - 202 26249037 ymfL c3195 - hypothetical protein 3099 43.28 -1 3058935..3059135 - 66 26249038 - c3196 - hypothetical protein 3100 43.38 -1 3059233..3059859 + 208 26249039 - c3197 - putative repressor protein of prophage 3101 43.27 -1 3060075..3060587 - 170 26249040 - c3198 - hypothetical protein 3102 51.90 0 3060560..3061243 - 227 26249041 - c3199 - hypothetical protein 3103 53.86 0 3060731..3061417 + 228 26249042 - c3200 - hypothetical protein 3104 46.06 0 3061483..3062307 + 274 26249043 yfdQ c3201 - hypothetical protein 3105 46.20 0 3062408..3062959 + 183 26249044 yfdR c3202 - hypothetical protein 3106 28.28 -2 3063044..3063934 + 296 26249045 - c3203 - hypothetical protein 3107 43.65 -1 3064143..3065315 + 390 26249046 - c3204 - hypothetical protein 3108 41.28 -1 3065329..3065718 - 129 26249047 - c3205 - hypothetical protein 3109 39.34 -1 3065702..3066517 - 271 26249048 - c3206 - hypothetical protein 3110 54.91 0 3067657..3068634 + 325 26249049 ygaT c3207 - hypothetical protein 3111 56.93 +1 3068588..3069922 + 444 26249050 ygaF c3208 - hypothetical protein 3112 56.66 +1 3069945..3071393 + 482 26249051 gabD c3209 - succinate-semialdehyde dehydrogenase I 3113 58.97 +1 3071401..3072687 + 428 26249052 gabT c3210 - 4-aminobutyrate aminotransferase 3114 51.32 0 3072924..3074324 + 466 161486141 gabP c3211 - gamma-aminobutyrate transporter 3115 53.24 0 3074345..3075007 + 220 161486140 ygaE c3212 - DNA-binding transcriptional regulator CsiR 3116 48.00 0 3075008..3075457 - 149 26249055 ygaU c3213 - hypothetical protein 3117 50.00 0 3075529..3075714 + 61 26249056 - c3214 - hypothetical protein 3118 51.57 0 3075541..3075699 - 52 26249057 yqaE c3215 - hypothetical protein 3119 52.00 0 3075882..3076181 + 99 26249058 ygaV c3216 - putative transcriptional regulator YgaV 3120 45.71 0 3076191..3076715 + 174 26249059 ygaP c3217 - hypothetical protein 3121 48.15 0 3076762..3077166 - 134 26249060 stpA c3218 - DNA binding protein, nucleoid-associated 3122 39.39 -1 3077328..3077459 - 43 26249061 - c3219 - hypothetical protein 3123 27.13 -2 3077579..3077707 + 42 26249062 - c3220 - hypothetical protein 3124 48.89 0 3077833..3078282 + 149 26249063 ygaW c3221 - hypothetical protein 3125 46.38 0 3078319..3078663 - 114 26249064 ygaC c3222 - hypothetical protein 3126 54.39 0 3078803..3079144 + 113 26249065 ygaM c3223 - hypothetical protein 3127 52.13 0 3079201..3080535 - 444 26249066 - c3224 - hypothetical protein 3128 51.85 0 3080623..3081108 + 161 26249067 - c3225 - hypothetical protein 3129 53.66 0 3081260..3081505 + 81 26249068 nrdH c3226 - glutaredoxin-like protein 3130 56.45 +1 3081502..3081912 + 136 26249069 nrdI c3227 - ribonucleotide reductase stimulatory protein 3131 52.17 0 3081885..3084029 + 714 26249070 nrdE c3228 - ribonucleotide-diphosphate reductase subunit alpha 3132 48.54 0 3084039..3084998 + 319 26249071 nrdF c3229 - ribonucleotide-diphosphate reductase subunit beta 3133 49.29 0 3085355..3086557 + 400 26249072 proV c3230 - glycine betaine transporter ATP-binding subunit 3134 58.40 +1 3086550..3087614 + 354 26249073 proW c3231 - glycine betaine transporter membrane protein 3135 51.96 0 3087671..3088663 + 330 161486139 proX c3232 - glycine betaine transporter periplasmic subunit 3136 39.46 -1 3088716..3088862 + 48 26249075 - c3233 - hypothetical protein 3137 54.85 0 3088855..3090039 + 394 26249076 - c3234 - putative transport protein 3138 52.71 0 3090164..3090901 + 245 26249077 ygaZ c3235 - hypothetical protein 3139 55.06 0 3090891..3091226 + 111 26249078 ygaH c3236 - hypothetical protein 3140 49.72 0 3091317..3091847 + 176 26249079 emrR c3237 - transcriptional repressor MprA 3141 53.33 0 3091962..3093146 + 394 26249080 emrA c3238 - multidrug resistance protein A 3142 56.20 +1 3093154..3094701 + 515 26249081 emrB c3239 - multidrug resistance protein B 3143 51.82 0 3094959..3095315 + 118 26249082 - c3240 - hypothetical protein 3144 53.79 0 3095055..3095450 - 131 26249083 - c3241 - hypothetical protein 3145 52.42 0 3095327..3095656 + 109 26249084 - c3242 - hypothetical protein 3146 52.92 0 3095653..3096765 + 370 26249085 - c3243 - hypothetical protein 3147 51.94 0 3096814..3097329 - 171 26249086 ygaG c3244 - S-ribosylhomocysteinase 3148 51.57 0 3097479..3099035 - 518 26249087 gshA c3245 - glutamate--cysteine ligase 3149 49.18 0 3099108..3099536 - 142 26249088 yqaA c3246 - hypothetical protein 3150 54.32 0 3099533..3100099 - 188 26249089 yqaB c3247 - fructose-1-phosphatase 3151 32.54 -2 3100129..3100254 - 41 26249090 - c3248 - hypothetical protein 3152 49.46 0 3101427..3101612 - 61 26249091 csrA c3249 - carbon storage regulator 3153 50.88 0 3104383..3104553 + 56 26249092 - c3251 - hypothetical protein 3154 51.70 0 3104607..3105107 - 166 26249093 recX c3252 - recombination regulator RecX 3155 53.86 0 3105176..3106237 - 353 26249094 recA c3253 - recombinase A 3156 56.09 +1 3106317..3106817 - 166 26249095 ygaD c3254 - competence damage-inducible protein A 3157 54.83 0 3106959..3108149 - 396 26249096 mltB c3255 - murein hydrolase B 3158 49.29 0 3108301..3108864 + 187 26249097 srlA c3256 - PTS system, glucitol/sorbitol-specific IIC2 component 3159 55.10 0 3108861..3109820 + 319 26249098 srlE c3257 - PTS system, glucitol/sorbitol-specific IIBC component 3160 55.65 0 3109831..3110202 + 123 26249099 srlB c3258 - glucitol/sorbitol-specific PTS system component IIA 3161 53.46 0 3110206..3110985 + 259 26249100 srlD c3259 - sorbitol-6-phosphate dehydrogenase 3162 53.89 0 3111091..3111450 + 119 26249101 gutM c3260 - DNA-binding transcriptional activator GutM 3163 48.58 0 3111517..3112290 + 257 26249102 srlR c3261 - DNA-bindng transcriptional repressor SrlR 3164 56.83 +1 3112283..3113248 + 321 26249103 gutQ c3262 - D-arabinose 5-phosphate isomerase 3165 56.57 +1 3113245..3114759 - 504 161486138 ygaA c3263 - anaerobic nitric oxide reductase transcription regulator 3166 50.29 0 3114916..3115959 - 347 26249105 - c3264 - hypothetical protein 3167 54.23 0 3116383..3117516 + 377 26249106 ygbD c3267 - nitric oxide reductase 3168 57.94 +1 3117740..3120064 - 774 26249107 hypF c3268 - hydrogenase maturation protein hypF 3169 52.12 0 3120145..3120687 - 180 26249108 hydN c3269 - electron transport protein HydN 3170 45.70 0 3120766..3120951 - 61 26249109 - c3270 - hypothetical protein 3171 42.42 -1 3121057..3121485 + 142 26249110 - c3271 - hypothetical protein 3172 46.03 0 3121448..3121573 - 41 26249111 - c3272 - hypothetical protein 3173 46.43 0 3121577..3121996 - 139 26249112 - c3273 - hypothetical protein 3174 41.99 -1 3121993..3122304 - 103 26249113 - c3274 - hypothetical protein 3175 40.62 -1 3122041..3122232 + 63 26249114 - c3275 - hypothetical protein 3176 49.10 0 3122467..3123240 - 257 26249115 - c3276 - hypothetical protein 3177 54.35 0 3123265..3123735 - 156 26249116 hycI c3277 - hydrogenase 3 maturation protease 3178 52.80 0 3123728..3124138 - 136 26249117 hycH c3278 - formate hydrogenlyase maturation protein hycH 3179 57.55 +1 3124135..3124902 - 255 26249118 hycG c3279 - formate hydrogenlyase subunit 7 3180 55.62 0 3124902..3125444 - 180 26249119 hycF c3280 - formate hydrogenlyase complex iron-sulfur subunit 3181 56.43 +1 3125454..3127163 - 569 26249120 hycE c3281 - formate hydrogenlyase subunit 5 precursor 3182 58.23 +1 3127181..3128104 - 307 26249121 hycD c3282 - formate hydrogenlyase subunit 4 3183 57.74 +1 3128107..3129933 - 608 26249122 hycC c3283 - formate hydrogenlyase subunit 3 3184 55.39 0 3129930..3130541 - 203 26249123 hycB c3284 - formate hydrogenlyase subunit 2 3185 49.57 0 3130666..3131127 - 153 26249124 hycA c3285 - formate hydrogenlyase regulatory protein HycA 3186 52.89 0 3131327..3131689 + 120 26249125 hypA c3286 - hydrogenase nickel incorporation protein 3187 55.67 0 3131693..3132565 + 290 26249126 hypB c3287 - hydrogenase nickel incorporation protein HypB 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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