version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2937 52.93 0 2906100..2907278 - 392 26248876 yfgL c3034 - outer membrane protein assembly complex subunit YfgL 2938 49.60 0 2907289..2907909 - 206 26248877 yfgM c3035 - hypothetical protein 2939 54.59 0 2907927..2909201 - 424 26248878 hisS c3036 - histidyl-tRNA synthetase 2940 52.99 0 2909312..2910430 - 372 26248879 ispG c3037 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2941 53.57 0 2910457..2911464 - 335 26248880 yfgA c3038 - hypothetical protein 2942 52.73 0 2911749..2912903 - 384 26248881 yfgB c3039 - hypothetical protein 2943 50.38 0 2913020..2913547 + 175 26248882 - c3040 - hypothetical protein 2944 52.08 0 2913053..2913484 - 143 26248883 ndk c3041 - nucleoside diphosphate kinase 2945 56.68 +1 2913633..2915945 - 770 26248884 pbpC c3042 - penicillin-binding protein 1C 2946 53.04 0 2915946..2920907 - 1653 26248885 yfhM c3043 - lipoprotein yfhM precursor 2947 52.60 0 2921114..2921959 + 281 161486154 sseA c3044 - 3-mercaptopyruvate sulfurtransferase 2948 46.41 0 2921943..2922095 + 50 26248887 - c3045 - hypothetical protein 2949 42.03 -1 2922287..2922424 + 45 26248888 - c3046 - hypothetical protein 2950 46.59 0 2922456..2923232 - 258 161486153 sseB c3047 - enhanced serine sensitivity protein SseB 2951 56.46 +1 2923375..2924658 - 427 26248890 pepB c3048 - aminopeptidase B 2952 50.75 0 2924717..2924917 - 66 26248891 yfhJ c3049 - hypothetical protein 2953 52.38 0 2924929..2925264 - 111 26248892 fdx c3050 - ferredoxin, 2Fe-2S 2954 58.13 +1 2925266..2927116 - 616 161486152 hscA c3051 - chaperone protein HscA 2955 52.33 0 2927133..2927648 - 171 26248894 hscB c3052 - co-chaperone HscB 2956 51.23 0 2927744..2928067 - 107 161486151 iscA c3053 - iron-sulfur cluster assembly protein 2957 49.07 0 2928003..2928485 + 160 26248896 - c3054 - hypothetical protein 2958 49.61 0 2928084..2928470 - 128 26248897 - c3055 - scaffold protein 2959 52.70 0 2928498..2929736 - 412 26248898 yfhO c3056 - cysteine desulfurase 2960 53.78 0 2929824..2930312 - 162 26248899 yfhP c3057 - DNA-binding transcriptional regulator IscR 2961 54.25 0 2930583..2931323 - 246 26248900 yfhQ c3058 - putative tRNA/rRNA methyltransferase YfhQ 2962 54.60 0 2931442..2932245 + 267 26248901 suhB c3059 - inositol monophosphatase 2963 49.66 0 2932363..2933244 + 293 26248902 yfhR c3060 - hypothetical protein 2964 51.99 0 2933435..2934715 + 426 161486150 csiE c3061 - stationary phase inducible protein CsiE 2965 56.75 +1 2934707..2935846 - 379 26248904 hcaT c3062 - putative 3-phenylpropionic acid transporter 2966 38.89 -2 2935880..2936023 - 47 26248905 - c3063 - hypothetical protein 2967 45.75 0 2936066..2936218 + 50 26248906 - c3064 - hypothetical protein 2968 50.35 0 2936209..2936637 + 142 26248907 yphA c3065 - hypothetical protein 2969 54.52 0 2936797..2937669 - 290 26248908 yphB c3066 - hypothetical protein 2970 54.06 0 2937681..2938775 - 364 26248909 yphC c3067 - hypothetical protein 2971 55.16 0 2938808..2939806 - 332 26248910 yphD c3068 - ABC transporter permease 2972 55.82 +1 2939831..2941342 - 503 26248911 yphE c3069 - ABC transporter ATP-binding protein 2973 45.93 0 2941365..2942348 - 327 26248912 yphF c3070 - ABC transporter periplasmic-binding protein 2974 54.28 0 2942445..2945819 - 1124 26248913 yphG c3071 - hypothetical protein 2975 51.33 0 2945838..2947037 + 399 26248914 yphH c3072 - hypothetical protein 2976 52.70 0 2947101..2948360 - 419 26248915 glyA c3073 - serine hydroxymethyltransferase 2977 52.64 0 2948684..2949874 + 396 26248916 hmpA c3075 - nitric oxide dioxygenase 2978 50.15 0 2949919..2950257 - 112 26248917 glnB c3076 - nitrogen regulatory protein P-II 1 2979 55.02 0 2950318..2951691 - 457 26248918 yfhA c3077 - hypothetical protein 2980 54.58 0 2951642..2952361 - 239 26248919 yfhG c3078 - hypothetical protein 2981 52.78 0 2952520..2954010 - 496 26248920 yfhK c3079 - putative sensor-like histidine kinase yfhK 2982 56.51 +1 2954523..2958410 - 1295 26248921 purL c3080 - phosphoribosylformylglycinamidine synthase 2983 50.61 0 2958668..2960224 + 518 26248922 yfhD c3081 - putative transglycosylase 2984 52.51 0 2960221..2960757 - 178 26248923 yfhC c3082 - tRNA-specific adenosine deaminase 2985 52.04 0 2960782..2961417 - 211 161486149 yfhB c3083 - hypothetical protein 2986 43.48 -1 2961378..2961515 - 45 26248925 - c3084 - hypothetical protein 2987 51.83 0 2961626..2962474 + 282 161486148 yfhH c3085 - putative DNA-binding transcriptional regulator 2988 44.83 0 2962530..2962790 + 86 26248927 yfhL c3086 - putative ferredoxin-like protein yfhL 2989 49.87 0 2963485..2963865 - 126 26248928 acpS c3087 - 4'-phosphopantetheinyl transferase 2990 55.29 0 2963865..2964611 - 248 26248929 pdxJ c3088 - pyridoxal phosphate biosynthetic protein PdxJ 2991 54.05 0 2964608..2965336 - 242 26248930 recO c3089 - DNA repair protein RecO 2992 52.32 0 2965348..2966253 - 301 26248931 era c3090 - GTP-binding protein Era 2993 50.37 0 2966250..2966930 - 226 26248932 rnc c3091 - ribonuclease III 2994 51.79 0 2967202..2968176 - 324 26248933 lepB c3092 - lsignal peptidase I 2995 53.11 0 2968192..2969991 - 599 26248934 lepA c3093 - GTP-binding protein LepA 2996 55.21 0 2970189..2970668 - 159 26248935 rseC c3094 - SoxR reducing system protein RseC 2997 51.31 0 2970665..2971621 - 318 26248936 rseB c3095 - periplasmic negative regulator of sigmaE 2998 51.46 0 2971621..2972271 - 216 26248937 rseA c3096 - anti-RNA polymerase sigma factor SigE 2999 48.77 0 2972304..2972912 - 202 26248938 rpoE c3097 - RNA polymerase sigma factor RpoE 3000 52.74 0 2973287..2974909 + 540 26248939 nadB c3098 - L-aspartate oxidase 3001 51.28 0 2974894..2975751 - 285 26248940 yfiC c3099 - hypothetical protein 3002 54.68 0 2975763..2977097 + 444 26248941 srmB c3100 - ATP-dependent RNA helicase SrmB 3003 48.54 0 2977130..2978056 - 308 26248942 yfiE c3101 - putative transcriptional regulator YfiE 3004 51.02 0 2978114..2978701 + 195 26248943 yfiK c3102 - neutral amino-acid efflux protein 3005 47.92 0 2978757..2979140 - 127 161486147 yfiD c3103 - autonomous glycyl radical cofactor GrcA 3006 45.50 0 2978874..2979251 + 125 26248945 - c3104 - hypothetical protein 3007 51.74 0 2979445..2980134 + 229 26248946 ung c3105 - uracil-DNA glycosylase 3008 56.60 +1 2980183..2981295 - 370 26248947 yfiF c3106 - putative methyltransferase 3009 49.76 0 2981427..2981846 + 139 26248948 trxC c3107 - thioredoxin 2 3010 51.60 0 2981864..2982613 + 249 26248949 yfiP c3108 - hypothetical protein 3011 54.19 0 2982645..2985305 + 886 26248950 yfiQ c3109 - hypothetical protein 3012 48.71 0 2985416..2986774 + 452 26248951 pssA c3110 - phosphatidylserine synthase 3013 52.75 0 2986799..2987143 + 114 26248952 yfiM c3111 - hypothetical protein 3014 47.92 0 2987140..2988531 - 463 26248953 kgtP c3112 - alpha-ketoglutarate transporter 3015 38.52 -2 2994127..2994261 + 44 26248954 - c3113 - hypothetical protein 3016 51.20 0 2994301..2996886 - 861 26248955 clpB c3114 - protein disaggregation chaperone 3017 53.69 0 2997004..2997735 - 243 26248956 yfiH c3115 - hypothetical protein 3018 53.01 0 2997732..2998712 - 326 26248957 rluD c3116 - 23S rRNA pseudouridine synthase D 3019 50.68 0 2998847..2999584 + 245 26248958 yfiO c3117 - outer membrane protein assembly complex subunit YfiO 3020 44.32 -1 2999773..3000309 - 178 26248959 - c3118 - hypothetical protein 3021 46.20 0 2999854..3000195 + 113 26248960 yfiA c3119 - translation inhibitor protein RaiA 3022 39.58 -1 3000299..3000346 + 15 26248961 pheL c5497 - Phe leader peptide 3023 48.75 0 3000445..3001605 + 386 26248962 pheA c3120 - bifunctional chorismate mutase/prephenate dehydratase 3024 52.32 0 3001648..3002769 - 373 26248963 tyrA c3121 - bifunctional chorismate mutase/prephenate dehydrogenase 3025 51.32 0 3002780..3003919 - 379 26248964 aroF c3122 - phospho-2-dehydro-3-deoxyheptonate aldolase 3026 44.01 -1 3004042..3004425 + 127 26248965 yfiL c3123 - hypothetical protein 3027 44.32 -1 3004572..3005090 + 172 26248966 yfiR c3124 - hypothetical protein 3028 48.08 0 3005080..3006306 + 408 26248967 yfiN c3125 - hypothetical protein 3029 51.14 0 3006322..3006804 + 160 26248968 yfiB c3126 - putative outer membrane lipoprotein 3030 48.28 0 3006881..3007228 - 115 26248969 rplS c3127 - 50S ribosomal protein L19 3031 53.39 0 3007270..3008037 - 255 26248970 trmD c3128 - tRNA (guanine-N(1)-)-methyltransferase 3032 48.82 0 3008068..3008616 - 182 161486146 rimM c3129 - 16S rRNA-processing protein 3033 51.41 0 3008635..3008883 - 82 161486145 rpsP c3130 - 30S ribosomal protein S16 3034 54.26 0 3009020..3010381 - 453 26248973 ffh c3131 - signal recognition particle protein 3035 51.56 0 3010473..3011339 + 288 26248974 ypjD c3132 - hypothetical protein 3036 51.21 0 3011450..3012646 + 398 161486144 - c3133 - hypothetical protein 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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