version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2229 50.81 0 2131230..2132219 - 329 26248164 araH c2312 - L-arabinose transporter permease protein 2230 52.01 0 2132231..2133745 - 504 161486201 araG c2313 - L-arabinose transporter ATP-binding protein 2231 50.72 0 2133815..2134855 - 346 26248166 araF c2314 - L-arabinose-binding periplasmic protein precursor 2232 48.02 0 2135601..2136104 + 167 26248167 yecI c2315 - Ferritin-like protein 2 2233 50.00 0 2136183..2136434 - 83 26248168 - c2316 - hypothetical protein 2234 39.46 -1 2136546..2136692 + 48 26248169 - c2317 - hypothetical protein 2235 39.46 -1 2136549..2136695 - 48 26248170 - c2318 - hypothetical protein 2236 50.31 0 2136898..2137221 + 107 26248171 yecR c2319 - hypothetical protein 2237 31.16 -2 2137231..2137368 - 45 26248172 - c2320 - hypothetical protein 2238 42.88 -1 2137378..2137890 + 170 26248173 ftn c2321 - ferritin 2239 45.42 0 2137928..2138167 - 79 26248174 yecH c2322 - hypothetical protein 2240 51.16 0 2138358..2139569 + 403 26248175 tyrP c2323 - tyrosine transporter 2241 52.85 0 2139631..2140296 - 221 26248176 yecA c2324 - hypothetical protein 2242 52.28 0 2140945..2141493 - 182 26248177 pgsA c2325 - phosphatidylglycerophosphate synthetase 2243 51.61 0 2141550..2143382 - 610 26248178 uvrC c2326 - excinuclease ABC subunit C 2244 49.62 0 2143379..2144035 - 218 26248179 uvrY c2327 - response regulator 2245 30.23 -2 2144274..2144402 - 42 26248180 - c2328 - hypothetical protein 2246 48.00 0 2144494..2144718 + 74 26248181 yecF c2329 - hypothetical protein 2247 46.06 0 2144786..2145508 - 240 161486200 sdiA c2330 - DNA-binding transcriptional activator SdiA 2248 53.65 0 2145738..2146490 - 250 26248183 yecC c2331 - putative amino-acid ABC transporter ATP-binding protein YecC 2249 53.21 0 2146487..2147155 - 222 26248184 yecS c2332 - amino-acid ABC transporter permease protein YecS 2250 53.80 0 2147170..2148156 - 328 26248185 yedO c2333 - D-cysteine desulfhydrase 2251 46.08 0 2148324..2148833 - 169 26248186 - c2334 - transposase 2252 49.30 0 2148973..2149830 - 285 26248187 fliY c2335 - cystine transporter subunit 2253 46.94 0 2149861..2150448 - 195 26248188 fliZ c2336 - protein FliZ 2254 54.31 0 2150458..2151177 - 239 26248189 fliA c2337 - flagellar biosynthesis sigma factor 2255 47.20 0 2151497..2153284 - 595 26248190 fliC c2338 - flagellin 2256 51.81 0 2153550..2154956 + 468 26248191 fliD c2339 - flagellar capping protein 2257 47.93 0 2154981..2155391 + 136 26248192 fliS c2340 - flagellar protein FliS 2258 52.19 0 2155391..2155756 + 121 26248193 fliT c2341 - flagellar biosynthesis protein FliT 2259 49.66 0 2155834..2157321 + 495 26248194 amyA c2342 - cytoplasmic alpha-amylase 2260 56.12 +1 2157355..2157771 - 138 26248195 yedD c2343 - hypothetical protein 2261 54.24 0 2157922..2159160 + 412 26248196 yedE c2344 - putative inner membrane protein 2262 48.29 0 2159157..2159390 + 77 26248197 yedF c2345 - hypothetical protein 2263 52.02 0 2159499..2160167 + 222 26248198 yedK c2346 - hypothetical protein 2264 36.05 -2 2160619..2160765 + 48 26248199 - c2347 - hypothetical protein 2265 44.41 -1 2160734..2161762 + 342 26248200 - c2348 - Outer membrane porin protein nmpC precursor 2266 37.09 -2 2162264..2163061 - 265 26248201 ybcM c2349 - putative transcriptional regulator YbcM 2267 42.75 -1 2163071..2163622 - 183 26248202 ybcL c2350 - putative kinase inhibitor 2268 43.90 -1 2163238..2163360 + 40 26248203 - c2351 - hypothetical protein 2269 43.24 -1 2163791..2164123 - 110 161486199 emrE c2352 - multidrug efflux protein 2270 54.92 0 2164468..2164782 - 104 161486198 fliE c2353 - flagellar hook-basal body protein FliE 2271 54.97 0 2164997..2166655 + 552 26248206 fliF c2354 - flagellar MS-ring protein 2272 56.12 +1 2166648..2167643 + 331 26248207 fliG c2355 - flagellar motor switch protein G 2273 56.13 +1 2166801..2167730 - 309 26248208 - c2356 - hypothetical protein 2274 57.21 +1 2167636..2168322 + 228 161486197 fliH c2357 - flagellar assembly protein H 2275 58.30 +1 2168322..2169695 + 457 26248210 fliI c2358 - flagellum-specific ATP synthase 2276 52.25 0 2169714..2170157 + 147 26248211 fliJ c2359 - flagellar biosynthesis chaperone 2277 54.79 0 2170154..2171281 + 375 26248212 fliK c2360 - flagellar hook-length control protein 2278 52.90 0 2171386..2171850 + 154 26248213 fliL c2361 - flagellar basal body-associated protein FliL 2279 53.14 0 2171810..2172859 + 349 26248214 fliM c2362 - flagellar motor switch protein FliM 2280 55.80 +1 2172856..2173269 + 137 26248215 fliN c2363 - flagellar motor switch protein FliN 2281 55.83 +1 2173269..2173637 + 122 26248216 fliO c2364 - flagellar biosynthesis protein FliO 2282 53.79 0 2173637..2174374 + 245 26248217 fliP c2365 - flagellar biosynthesis protein FliP 2283 51.11 0 2174384..2174653 + 89 26248218 fliQ c2366 - flagellar biosynthesis protein FliQ 2284 46.95 0 2174662..2175447 + 261 26248219 fliR c2367 - flagellar biosynthesis protein FliR 2285 38.46 -2 2175737..2176360 + 207 26248221 rcsA c2369 - colanic acid capsular biosynthesis activation protein A 2286 50.79 0 2176404..2176592 - 62 26248222 dsrB c2370 - hypothetical protein 2287 49.62 0 2176689..2176952 - 87 26248223 - c2371 - hypothetical protein 2288 48.56 0 2176740..2176982 + 80 26248224 yodD c2372 - hypothetical protein 2289 51.84 0 2177280..2178095 + 271 26248225 yedP c2373 - mannosyl-3-phosphoglycerate phosphatase 2290 51.87 0 2178092..2179801 - 569 26248226 yedQ c2374 - hypothetical protein 2291 47.62 0 2179707..2179895 - 62 26248227 - c2375 - hypothetical protein 2292 51.91 0 2179957..2180139 - 60 26248228 yodC c2376 - hypothetical protein 2293 53.27 0 2180218..2181135 - 305 26248229 yedI c2377 - hypothetical protein 2294 54.18 0 2181308..2182228 + 306 26248230 yedA c2378 - hypothetical protein 2295 56.48 +1 2182217..2182687 - 156 26248231 vsr c2379 - very short patch repair protein 2296 51.80 0 2182668..2184086 - 472 26248232 dcm c2380 - DNA cytosine methylase 2297 53.83 0 2184198..2184875 - 225 26248233 yedJ c2381 - hypothetical protein 2298 49.22 0 2184888..2185271 - 127 26248234 yedR c2382 - hypothetical protein 2299 42.82 -1 2185750..2186877 + 375 26248235 - c2383 - Outer membrane protein N precursor 2300 48.36 0 2187473..2188324 + 283 26248237 yedU c2385 - chaperone protein HchA 2301 39.59 -1 2188432..2189790 - 452 26248238 yedV c2386 - putative sensor-like histidine kinase yedV 2302 44.49 -1 2189790..2190461 - 223 161486196 yedW c2387 - transcriptional regulatory protein YedW 2303 42.27 -1 2190594..2191007 + 137 26248240 - c2388 - transthyretin-like protein precursor 2304 52.04 0 2191116..2192120 + 334 26248241 yedY c2389 - putative sulfite oxidase subunit YedY 2305 48.11 0 2192121..2192756 + 211 26248242 yedZ c2390 - putative sulfite oxidase subunit YedZ 2306 38.86 -2 2193014..2193646 + 210 26248243 yodA c2391 - hypothetical protein 2307 48.73 0 2194512..2195732 + 406 26248244 - c2392 - P4 family integrase 2308 32.07 -2 2195846..2197666 + 606 26248245 - c2393 - hypothetical protein 2309 44.13 -1 2197781..2199244 - 487 26248246 - c2394 - PilV-like protein 2310 44.62 -1 2199297..2199854 - 185 26248247 - c2395 - putative type IV pilin protein precursor 2311 35.24 -2 2200253..2200567 - 104 26248248 - c2396 - hypothetical protein 2312 43.31 -1 2201204..2202706 + 500 26248249 - c2397 - hypothetical protein 2313 32.14 -2 2202763..2203686 + 307 26248250 - c2398 - hypothetical protein 2314 33.14 -2 2203818..2204327 - 169 26248251 - c2399 - hypothetical protein 2315 29.63 -2 2204464..2205300 + 278 26248252 - c2400 - hypothetical protein 2316 47.05 0 2205646..2206221 - 191 26248253 - c2401 - hypothetical protein 2317 33.33 -2 2206262..2206399 - 45 26248254 - c2402 - hypothetical protein 2318 36.61 -2 2206594..2207082 + 162 26248255 - c2403 - hypothetical protein 2319 34.74 -2 2207072..2207284 + 70 26248256 - c2404 - hypothetical protein 2320 33.42 -2 2207572..2208753 - 393 26248257 - c2405 - hypothetical protein 2321 45.07 0 2208805..2209767 - 320 26248258 - c2406 - hypothetical protein 2322 23.53 -2 2210085..2210237 + 50 26248259 - c2407 - hypothetical protein 2323 32.82 -2 2211120..2211701 + 193 26248260 - c2408 - hypothetical protein 2324 31.01 -2 2211786..2212517 - 243 26248261 - c2409 - hypothetical protein 2325 36.25 -2 2212691..2213170 + 159 26248262 - c2410 - hypothetical protein 2326 46.42 0 2213329..2213733 + 134 26248263 - c2411 - DNA-binding protein H-NS 2327 47.24 0 2213797..2214177 - 126 26248264 - c2412 - hypothetical protein 2328 36.63 -2 2214256..2214498 - 80 26248265 - c2413 - hypothetical protein 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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