version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2166 46.38 0 2073714..2073989 + 91 26248100 yebW c2246 - hypothetical protein 2167 47.88 0 2073990..2074649 - 219 26248101 pphA c2247 - serine/threonine protein phosphatase 1 2168 41.18 -1 2074871..2075023 - 50 26248102 - c2248 - hypothetical protein 2169 46.78 0 2075041..2075382 - 113 26248103 yebY c2249 - hypothetical protein 2170 53.15 0 2075395..2076267 - 290 26248104 yebZ c2250 - hypothetical protein 2171 48.80 0 2076271..2076645 - 124 26248105 - c2251 - hypothetical protein 2172 48.05 0 2076784..2077014 + 76 161486211 holE c2252 - DNA polymerase III subunit theta 2173 51.90 0 2077117..2077773 + 218 26248107 yobB c2253 - hypothetical protein 2174 51.58 0 2077797..2078459 + 220 161486210 - c2254 - exodeoxyribonuclease X 2175 47.47 0 2078456..2078851 - 131 26248109 - c2255 - hypothetical protein 2176 50.39 0 2078852..2080516 - 554 26248110 ptrB c2256 - protease II 2177 51.58 0 2080602..2081204 + 200 26248111 - c2257 - hypothetical protein 2178 51.97 0 2080725..2081384 - 219 26248112 yebE c2258 - hypothetical protein 2179 49.86 0 2081711..2082079 - 122 26248113 yebF c2259 - hypothetical protein 2180 49.83 0 2082134..2082424 - 96 26248114 yebG c2260 - DNA damage-inducible protein YebG 2181 55.61 0 2083792..2084433 - 213 26248115 eda c2263 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 2182 53.37 0 2084470..2086281 - 603 161486209 edd c2264 - phosphogluconate dehydratase 2183 51.56 0 2086516..2087991 - 491 26248117 zwf c2265 - glucose-6-phosphate 1-dehydrogenase 2184 34.00 -2 2088157..2088306 - 49 26248118 - c2266 - hypothetical protein 2185 49.20 0 2088329..2089198 + 289 26248119 yebK c2267 - DNA-binding transcriptional regulator HexR 2186 52.81 0 2089326..2090768 + 480 161486208 pykA c2268 - pyruvate kinase 2187 50.51 0 2090900..2091871 - 323 26248121 msbB c2269 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2188 52.38 0 2091990..2093312 - 440 26248122 yebA c2270 - hypothetical protein 2189 48.77 0 2093328..2094260 - 310 161486207 znuA c2271 - high-affinity zinc transporter periplasmic component 2190 49.34 0 2094339..2095094 + 251 26248124 znuC c2272 - high-affinity zinc transporter ATPase 2191 51.53 0 2095091..2095876 + 261 26248125 znuB c2273 - high-affinity zinc transporter membrane component 2192 52.42 0 2096023..2097033 - 336 26248126 ruvB c2274 - Holliday junction DNA helicase B 2193 53.43 0 2097042..2097653 - 203 26248127 ruvA c2275 - Holliday junction DNA helicase motor protein 2194 42.62 -1 2097929..2098531 + 200 161486206 yebB c2276 - hypothetical protein 2195 55.62 0 2098533..2099057 - 174 26248129 ruvC c2277 - Holliday junction resolvase 2196 51.55 0 2099089..2099829 - 246 26248130 yebC c2278 - hypothetical protein 2197 52.70 0 2099858..2100301 - 147 26248131 ntpA c2279 - dATP pyrophosphohydrolase 2198 53.81 0 2100303..2102075 - 590 26248132 aspS c2280 - aspartyl-tRNA synthetase 2199 53.09 0 2102385..2102951 + 188 161486205 yecD c2281 - hypothetical protein 2200 50.18 0 2102948..2103766 + 272 26248134 yecE c2282 - hypothetical protein 2201 49.75 0 2103819..2104214 + 131 161486204 yecN c2283 - hypothetical protein 2202 50.40 0 2104255..2104998 + 247 26248136 yecO c2284 - hypothetical protein 2203 52.57 0 2104995..2105966 + 323 26248137 yecP c2285 - hypothetical protein 2204 51.76 0 2106131..2108578 - 815 26248138 bisZ c2286 - trimethylamine-N-oxide reductase 2 precursor 2205 47.77 0 2108585..2109685 - 366 26248139 yecK c2287 - cytochrome c-type protein torY 2206 44.70 0 2109591..2109722 - 43 26248140 - c2288 - hypothetical protein 2207 52.34 0 2110073..2110819 - 248 26248141 - c2289 - copper homeostasis protein CutC 2208 51.48 0 2110833..2111405 - 190 26248142 yecM c2290 - hypothetical protein 2209 53.00 0 2111615..2113348 + 577 26248143 argS c2291 - arginyl-tRNA synthetase 2210 53.69 0 2113401..2113793 - 130 26248144 flhE c2292 - flagellar protein flhE precursor 2211 55.03 0 2113793..2115871 - 692 161486203 flhA c2293 - flagellar biosynthesis protein FlhA 2212 55.09 0 2115864..2117012 - 382 26248146 flhB c2294 - flagellar biosynthesis protein FlhB 2213 49.66 0 2117045..2117191 + 48 26248147 - c2295 - hypothetical protein 2214 53.49 0 2117221..2117865 - 214 161486202 cheZ c2296 - chemotaxis regulator CheZ 2215 49.49 0 2117876..2118265 - 129 26248149 cheY c2297 - chemotaxis regulatory protein CheY 2216 54.29 0 2118280..2119329 - 349 26248150 cheB c2298 - chemotaxis-specific methylesterase 2217 54.24 0 2119332..2120192 - 286 26248151 cheR c2299 - chemotaxis methyltransferase CheR 2218 42.28 -1 2120318..2120440 - 40 26248152 - c2300 - hypothetical protein 2219 52.11 0 2120483..2122165 - 560 26248153 tar c2301 - methyl-accepting chemotaxis protein II 2220 52.18 0 2122289..2122792 - 167 26248154 cheW c2302 - purine-binding chemotaxis protein 2221 53.00 0 2122813..2124831 - 672 26248155 cheA c2303 - chemotaxis protein CheA 2222 53.18 0 2124782..2125708 - 308 26248156 motB c2304 - flagellar motor protein MotB 2223 51.24 0 2125705..2126592 - 295 26248157 motA c2305 - flagellar motor protein MotA 2224 49.22 0 2126718..2127296 - 192 26248158 flhC c2306 - transcriptional activator FlhC 2225 46.67 0 2127299..2127658 - 119 26248160 flhD c2308 - transcriptional activator FlhD 2226 44.99 0 2128429..2128857 + 142 26248161 yecG c2309 - universal stress protein UspC 2227 49.65 0 2128864..2130297 - 477 26248162 otsA c2310 - trehalose-6-phosphate synthase 2228 51.05 0 2130263..2131120 - 285 26248163 otsB c2311 - trehalose-6-phosphate phosphatase 2229 50.81 0 2131230..2132219 - 329 26248164 araH c2312 - L-arabinose transporter permease protein 2230 52.01 0 2132231..2133745 - 504 161486201 araG c2313 - L-arabinose transporter ATP-binding protein 2231 50.72 0 2133815..2134855 - 346 26248166 araF c2314 - L-arabinose-binding periplasmic protein precursor 2232 48.02 0 2135601..2136104 + 167 26248167 yecI c2315 - Ferritin-like protein 2 2233 50.00 0 2136183..2136434 - 83 26248168 - c2316 - hypothetical protein 2234 39.46 -1 2136546..2136692 + 48 26248169 - c2317 - hypothetical protein 2235 39.46 -1 2136549..2136695 - 48 26248170 - c2318 - hypothetical protein 2236 50.31 0 2136898..2137221 + 107 26248171 yecR c2319 - hypothetical protein 2237 31.16 -2 2137231..2137368 - 45 26248172 - c2320 - hypothetical protein 2238 42.88 -1 2137378..2137890 + 170 26248173 ftn c2321 - ferritin 2239 45.42 0 2137928..2138167 - 79 26248174 yecH c2322 - hypothetical protein 2240 51.16 0 2138358..2139569 + 403 26248175 tyrP c2323 - tyrosine transporter 2241 52.85 0 2139631..2140296 - 221 26248176 yecA c2324 - hypothetical protein 2242 52.28 0 2140945..2141493 - 182 26248177 pgsA c2325 - phosphatidylglycerophosphate synthetase 2243 51.61 0 2141550..2143382 - 610 26248178 uvrC c2326 - excinuclease ABC subunit C 2244 49.62 0 2143379..2144035 - 218 26248179 uvrY c2327 - response regulator 2245 30.23 -2 2144274..2144402 - 42 26248180 - c2328 - hypothetical protein 2246 48.00 0 2144494..2144718 + 74 26248181 yecF c2329 - hypothetical protein 2247 46.06 0 2144786..2145508 - 240 161486200 sdiA c2330 - DNA-binding transcriptional activator SdiA 2248 53.65 0 2145738..2146490 - 250 26248183 yecC c2331 - putative amino-acid ABC transporter ATP-binding protein YecC 2249 53.21 0 2146487..2147155 - 222 26248184 yecS c2332 - amino-acid ABC transporter permease protein YecS 2250 53.80 0 2147170..2148156 - 328 26248185 yedO c2333 - D-cysteine desulfhydrase 2251 46.08 0 2148324..2148833 - 169 26248186 - c2334 - transposase 2252 49.30 0 2148973..2149830 - 285 26248187 fliY c2335 - cystine transporter subunit 2253 46.94 0 2149861..2150448 - 195 26248188 fliZ c2336 - protein FliZ 2254 54.31 0 2150458..2151177 - 239 26248189 fliA c2337 - flagellar biosynthesis sigma factor 2255 47.20 0 2151497..2153284 - 595 26248190 fliC c2338 - flagellin 2256 51.81 0 2153550..2154956 + 468 26248191 fliD c2339 - flagellar capping protein 2257 47.93 0 2154981..2155391 + 136 26248192 fliS c2340 - flagellar protein FliS 2258 52.19 0 2155391..2155756 + 121 26248193 fliT c2341 - flagellar biosynthesis protein FliT 2259 49.66 0 2155834..2157321 + 495 26248194 amyA c2342 - cytoplasmic alpha-amylase 2260 56.12 +1 2157355..2157771 - 138 26248195 yedD c2343 - hypothetical protein 2261 54.24 0 2157922..2159160 + 412 26248196 yedE c2344 - putative inner membrane protein 2262 48.29 0 2159157..2159390 + 77 26248197 yedF c2345 - hypothetical protein 2263 52.02 0 2159499..2160167 + 222 26248198 yedK c2346 - hypothetical protein 2264 36.05 -2 2160619..2160765 + 48 26248199 - c2347 - hypothetical protein 2265 44.41 -1 2160734..2161762 + 342 26248200 - c2348 - Outer membrane porin protein nmpC precursor 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0