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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1993 50.63 0 1913562..1913798 + 78 26247927 lpp c2072 - major outer membrane lipoprotein precursor 1994 52.64 0 1913861..1914865 - 334 26247928 ynhG c2073 - hypothetical protein 1995 48.20 0 1915014..1915430 - 138 26247929 ynhA c2074 - cysteine desufuration protein SufE 1996 55.04 0 1915443..1916663 - 406 26247930 - c2075 - selenocysteine lyase 1997 53.38 0 1916660..1917931 - 423 26247931 ynhC c2076 - cysteine desulfurase activator complex subunit SufD 1998 49.93 0 1917906..1918652 - 248 26247932 sufC c2077 - cysteine desulfurase ATPase component 1999 51.60 0 1918662..1920188 - 508 26247933 ynhE c2078 - cysteine desulfurase activator complex subunit SufB 2000 52.30 0 1920158..1920526 - 122 26247934 sufA c2079 - iron-sulfur cluster assembly scaffold protein 2001 43.70 -1 1921075..1921344 - 89 26247935 ydiH c2080 - hypothetical protein 2002 50.85 0 1921363..1921773 - 136 26247936 ydiI c2081 - hypothetical protein 2003 53.25 0 1921770..1924826 - 1018 26247937 ydiJ c2082 - hypothetical protein 2004 54.09 0 1925040..1926152 + 370 26247938 ydiK c2083 - putative inner membrane protein 2005 44.79 0 1926554..1926937 + 127 26247939 ydiL c2084 - hypothetical protein 2006 45.51 0 1927037..1928251 + 404 26247940 ydiM c2085 - putative transport protein YdiM 2007 45.05 0 1928472..1929743 + 423 26247941 ydiN c2086 - putative transport protein YdiN 2008 48.10 0 1929755..1930621 + 288 26247942 aroE c2087 - quinate/shikimate dehydrogenase 2009 49.93 0 1930652..1931410 + 252 26247943 aroD c2088 - 3-dehydroquinate dehydratase 2010 47.49 0 1931556..1933151 + 531 26247944 ydiF c2089 - hypothetical protein 2011 51.65 0 1933165..1934316 + 383 161486218 ydiO c2090 - putative acyl-CoA dehydrogenase 2012 42.76 -1 1934359..1935270 - 303 26247946 ydiP c2091 - putative transcriptional regulator YdiP 2013 41.24 -1 1935373..1935549 - 58 26247947 - c2092 - hypothetical protein 2014 51.24 0 1935586..1936350 + 254 161486217 ydiQ c2093 - putative electron transfer flavoprotein YdiQ 2015 53.46 0 1936370..1937308 + 312 26247949 ydiR c2094 - electron transfer flavoprotein subunit YdiR 2016 54.65 0 1937363..1938652 + 429 26247950 ydiS c2095 - hypothetical protein 2017 48.64 0 1938649..1938942 + 97 26247951 ydiT c2096 - ferredoxin-like protein ydiT 2018 50.09 0 1938945..1940645 + 566 26247952 ydiD c2097 - short chain acyl-CoA synthetase 2019 54.52 0 1940702..1943080 - 792 26247953 ppsA c2098 - phosphoenolpyruvate synthase 2020 50.48 0 1943413..1944246 + 277 26247954 ydiA c2099 - hypothetical protein 2021 53.10 0 1944403..1945449 + 348 26247955 aroH c2100 - phospho-2-dehydro-3-deoxyheptonate aldolase 2022 46.12 0 1945554..1945772 + 72 26247956 ydiE c2101 - hypothetical protein 2023 52.33 0 1945776..1947212 - 478 26247957 ydiU c2102 - hypothetical protein 2024 41.46 -1 1947275..1947988 - 237 26247958 ydiV c2103 - hypothetical protein 2025 49.46 0 1948235..1948699 - 154 26247959 nlpC c2104 - lipoprotein NlpC 2026 55.47 0 1948777..1949526 - 249 26247960 btuD c2105 - vitamin B12-transporter ATPase 2027 48.91 0 1949526..1950077 - 183 26247961 btuE c2106 - putative glutathione peroxidase 2028 54.84 0 1950139..1951119 - 326 26247962 btuC c2107 - vtamin B12-transporter permease 2029 49.61 0 1951016..1951144 - 42 26247963 - c2108 - hypothetical protein 2030 50.00 0 1951220..1951519 - 99 26247964 ihfA c2109 - integration host factor subunit alpha 2031 54.78 0 1953927..1954910 - 327 161486216 pheS c2112 - phenylalanyl-tRNA synthetase subunit alpha 2032 35.56 -2 1955194..1955238 - 14 26247966 pheM c5495 - phenylalanyl-tRNA synthetase operon leader peptide 2033 48.74 0 1955361..1955717 - 118 26247967 rplT c2113 - 50S ribosomal protein L20 2034 46.41 0 1955839..1956450 + 203 26247968 - c2114 - hypothetical protein 2035 47.82 0 1956064..1956498 - 144 26247969 infC c2115 - translation initiation factor IF-3 2036 49.40 0 1956610..1958538 - 642 26247970 thrS c2116 - threonyl-tRNA synthetase 2037 35.52 -2 1959224..1959589 + 121 26247971 - c2117 - hypothetical protein 2038 38.14 -2 1959607..1959918 + 103 26247972 - c2118 - hypothetical protein 2039 32.29 -2 1959899..1960090 + 63 26247973 - c2119 - hypothetical protein 2040 49.01 0 1960421..1961179 - 252 26247974 ydiY c2120 - hypothetical protein 2041 54.34 0 1961463..1962395 + 310 26247975 pfkB c2121 - 6-phosphofructokinase 2 2042 44.71 0 1962424..1962801 - 125 26247976 - c2122 - hypothetical protein 2043 43.99 -1 1962496..1962786 + 96 26247977 ydiZ c2123 - hypothetical protein 2044 52.50 0 1962892..1963752 + 286 26247978 yniA c2124 - hypothetical protein 2045 44.13 -1 1963793..1964329 - 178 26247979 yniB c2125 - hypothetical protein 2046 50.97 0 1964476..1965144 + 222 26247980 yniC c2126 - 2-deoxyglucose-6-phosphatase 2047 50.42 0 1965308..1965898 + 196 161486215 ydjM c2127 - hypothetical protein 2048 52.80 0 1966031..1967422 + 463 26247982 ydjN c2128 - putative symporter ydjN 2049 50.38 0 1967469..1967732 - 87 26247983 - c2129 - cell division modulator 2050 54.09 0 1967898..1968056 - 52 26247984 - c2130 - hypothetical protein 2051 51.11 0 1967915..1970176 + 753 26247985 katE c2131 - hydroperoxidase II 2052 50.20 0 1970223..1970981 - 252 26247986 ydjC c2132 - hypothetical protein 2053 46.55 0 1970994..1972400 - 468 26247987 celF c2133 - 6-phospho-beta-glucosidase 2054 41.04 -1 1972449..1973291 - 280 26247988 celD c2134 - DNA-binding transcriptional regulator ChbR 2055 48.72 0 1973299..1973649 - 116 26247989 celC c2135 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA 2056 48.49 0 1973700..1975058 - 452 26247990 celB c2136 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC 2057 43.93 -1 1975143..1975463 - 106 26247991 celA c2137 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB 2058 48.97 0 1975763..1976101 - 112 26247992 osmE c2138 - DNA-binding transcriptional activator OsmE 2059 49.76 0 1976303..1977130 + 275 26247993 nadE c2139 - NAD synthetase 2060 50.45 0 1977360..1978247 + 295 26247994 ydjQ c2140 - nucleotide excision repair endonuclease 2061 50.70 0 1978207..1978845 - 212 26247995 ydjR c2141 - hypothetical protein 2062 51.12 0 1978973..1979461 + 162 26247996 - c2142 - hypothetical protein 2063 51.03 0 1978985..1979470 - 161 26247997 spy c2143 - periplasmic protein 2064 53.46 0 1979800..1980768 - 322 26247998 ydjS c2144 - succinylglutamate desuccinylase 2065 55.06 0 1980761..1982104 - 447 26247999 - c2145 - succinylarginine dihydrolase 2066 58.22 +1 1982101..1983579 - 492 26248000 astD c2146 - succinylglutamic semialdehyde dehydrogenase 2067 54.75 0 1983663..1984610 - 315 26248001 - c2147 - arginine succinyltransferase 2068 55.20 0 1984607..1985827 - 406 26248002 argD c2148 - bifunctional succinylornithine transaminase/acetylornithine transaminase 2069 43.27 -1 1986090..1986260 + 56 26248003 - c2149 - hypothetical protein 2070 53.41 0 1986273..1987079 + 268 161486214 xthA c2150 - exonuclease III 2071 47.04 0 1987198..1987956 + 252 26248005 ydjX c2151 - hypothetical protein 2072 49.05 0 1987799..1988638 + 279 26248006 ydjY c2152 - hypothetical protein 2073 50.99 0 1988652..1989359 + 235 26248007 ydjZ c2153 - hypothetical protein 2074 56.83 +1 1989359..1989907 + 182 26248008 ynjA c2154 - hypothetical protein 2075 54.67 0 1989917..1991083 + 388 26248009 - c2155 - hypothetical protein 2076 56.41 +1 1991032..1992591 + 519 26248010 ynjC c2156 - ABC transporter permease 2077 51.82 0 1992558..1993244 + 228 26248011 ynjD c2157 - ABC transporter ATP-binding protein 2078 53.36 0 1993296..1994618 + 440 26248012 - c2158 - putative thiosulfate sulfurtransferase ynjE precursor 2079 54.55 0 1994627..1995253 - 208 26248013 ynjF c2159 - hypothetical protein 2080 54.90 0 1995334..1995741 + 135 26248014 - c2160 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 2081 49.82 0 1995707..1995979 - 90 26248015 ynjH c2161 - hypothetical protein 2082 53.50 0 1996215..1997558 + 447 26248016 gdhA c2162 - glutamate dehydrogenase 2083 43.52 -1 1997614..1999557 - 647 26248017 - c2163 - hypothetical protein 2084 45.15 0 1999554..2001254 - 566 26248018 ybeW c2164 - chaperone protein hscC 2085 34.21 -2 2001324..2002124 - 266 26248019 - c2165 - hypothetical protein 2086 54.24 0 2002243..2004246 - 667 26248020 topB c2166 - DNA topoisomerase III 2087 55.33 0 2004194..2005243 - 349 26248021 selD c2167 - selenophosphate synthetase 2088 54.74 0 2005354..2005923 - 189 26248022 ydjA c2168 - hypothetical protein 2089 47.88 0 2005959..2006123 + 54 26248023 - c2169 - hypothetical protein 2090 51.86 0 2006066..2007922 + 618 26248024 sppA c2170 - protease 4 2091 50.05 0 2008089..2009105 + 338 26248025 ansA c2171 - cytoplasmic asparaginase I 2092 53.12 0 2009116..2009757 + 213 161486213 ydjB c2172 - nicotinamidase/pyrazinamidase 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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