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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1959 52.53 0 1884663..1885235 - 190 26247893 sodC c2038 - superoxide dismutase 1960 52.06 0 1885265..1886161 - 298 26247894 ydhF c2039 - oxidoreductase ydhF 1961 48.15 0 1886210..1886587 - 125 26247895 ydhL c2040 - hypothetical protein 1962 47.15 0 1886218..1886340 + 40 26247896 - c2041 - hypothetical protein 1963 52.50 0 1886552..1887151 + 199 26247897 ydhM c2042 - putative transcriptional regulator YdhM 1964 52.91 0 1887188..1888285 + 365 26247898 nemA c2043 - N-ethylmaleimide reductase 1965 50.74 0 1888366..1888773 + 135 26247899 gloA c2044 - glyoxalase I 1966 54.32 0 1888876..1889523 + 215 26247900 rnt c2045 - ribonuclease T 1967 54.86 0 1889585..1889728 - 47 26247901 - c2046 - hypothetical protein 1968 56.25 +1 1889616..1889759 + 47 26247902 - c2047 - hypothetical protein 1969 52.59 0 1889895..1890242 - 115 26247903 ydhD c2048 - hypothetical protein 1970 48.43 0 1890577..1891404 + 275 26247904 ydhO c2049 - hypothetical protein 1971 49.83 0 1891532..1892113 + 193 26247905 sodB c2050 - superoxide dismutase 1972 54.19 0 1892259..1893428 - 389 26247906 ydhP c2051 - putative transport protein YdhP 1973 53.31 0 1893982..1895007 + 341 26247907 purR c2052 - DNA-binding transcriptional repressor PurR 1974 53.59 0 1895004..1895936 - 310 26247908 ydhB c2053 - putative DNA-binding transcriptional regulator 1975 53.22 0 1896049..1897260 + 403 26247909 ydhC c2054 - inner membrane transport protein YdhC 1976 47.87 0 1897551..1898699 + 382 26247910 cfa c2055 - cyclopropane fatty acyl phospholipid synthase 1977 47.20 0 1898739..1899380 - 213 26247911 ribE c2056 - riboflavin synthase subunit alpha 1978 53.28 0 1899595..1900968 + 457 26247912 ydhE c2057 - multidrug efflux protein 1979 51.23 0 1901009..1902265 - 418 26247913 ydhQ c2058 - hypothetical protein 1980 44.12 -1 1902839..1903144 + 101 26247914 - c2059 - hypothetical protein 1981 47.24 0 1903270..1904880 + 536 26247915 ydhS c2060 - hypothetical protein 1982 45.24 0 1904867..1904992 - 41 26247916 - c2061 - hypothetical protein 1983 52.40 0 1904886..1905698 - 270 26247917 ydhT c2062 - hypothetical protein 1984 51.27 0 1905087..1905833 + 248 26247918 - c2063 - hypothetical protein 1985 49.75 0 1905702..1906487 - 261 26247919 ydhU c2064 - PhsC protein 1986 49.86 0 1906484..1907203 - 239 26247920 - c2065 - putative ferredoxin-like protein ydhX 1987 52.47 0 1907216..1907863 - 215 26247921 ydhW c2066 - hypothetical protein 1988 48.07 0 1907867..1909969 - 700 161486219 ydhV c2067 - putative oxidoreductase 1989 48.33 0 1909990..1910616 - 208 26247923 - c2068 - hypothetical protein 1990 46.67 0 1911072..1911281 - 69 26247924 ydhZ c2069 - hypothetical protein 1991 44.96 0 1911393..1911521 + 42 26247925 - c2070 - hypothetical protein 1992 49.54 0 1911623..1913251 + 542 26247926 pykF c2071 - pyruvate kinase 1993 50.63 0 1913562..1913798 + 78 26247927 lpp c2072 - major outer membrane lipoprotein precursor 1994 52.64 0 1913861..1914865 - 334 26247928 ynhG c2073 - hypothetical protein 1995 48.20 0 1915014..1915430 - 138 26247929 ynhA c2074 - cysteine desufuration protein SufE 1996 55.04 0 1915443..1916663 - 406 26247930 - c2075 - selenocysteine lyase 1997 53.38 0 1916660..1917931 - 423 26247931 ynhC c2076 - cysteine desulfurase activator complex subunit SufD 1998 49.93 0 1917906..1918652 - 248 26247932 sufC c2077 - cysteine desulfurase ATPase component 1999 51.60 0 1918662..1920188 - 508 26247933 ynhE c2078 - cysteine desulfurase activator complex subunit SufB 2000 52.30 0 1920158..1920526 - 122 26247934 sufA c2079 - iron-sulfur cluster assembly scaffold protein 2001 43.70 -1 1921075..1921344 - 89 26247935 ydiH c2080 - hypothetical protein 2002 50.85 0 1921363..1921773 - 136 26247936 ydiI c2081 - hypothetical protein 2003 53.25 0 1921770..1924826 - 1018 26247937 ydiJ c2082 - hypothetical protein 2004 54.09 0 1925040..1926152 + 370 26247938 ydiK c2083 - putative inner membrane protein 2005 44.79 0 1926554..1926937 + 127 26247939 ydiL c2084 - hypothetical protein 2006 45.51 0 1927037..1928251 + 404 26247940 ydiM c2085 - putative transport protein YdiM 2007 45.05 0 1928472..1929743 + 423 26247941 ydiN c2086 - putative transport protein YdiN 2008 48.10 0 1929755..1930621 + 288 26247942 aroE c2087 - quinate/shikimate dehydrogenase 2009 49.93 0 1930652..1931410 + 252 26247943 aroD c2088 - 3-dehydroquinate dehydratase 2010 47.49 0 1931556..1933151 + 531 26247944 ydiF c2089 - hypothetical protein 2011 51.65 0 1933165..1934316 + 383 161486218 ydiO c2090 - putative acyl-CoA dehydrogenase 2012 42.76 -1 1934359..1935270 - 303 26247946 ydiP c2091 - putative transcriptional regulator YdiP 2013 41.24 -1 1935373..1935549 - 58 26247947 - c2092 - hypothetical protein 2014 51.24 0 1935586..1936350 + 254 161486217 ydiQ c2093 - putative electron transfer flavoprotein YdiQ 2015 53.46 0 1936370..1937308 + 312 26247949 ydiR c2094 - electron transfer flavoprotein subunit YdiR 2016 54.65 0 1937363..1938652 + 429 26247950 ydiS c2095 - hypothetical protein 2017 48.64 0 1938649..1938942 + 97 26247951 ydiT c2096 - ferredoxin-like protein ydiT 2018 50.09 0 1938945..1940645 + 566 26247952 ydiD c2097 - short chain acyl-CoA synthetase 2019 54.52 0 1940702..1943080 - 792 26247953 ppsA c2098 - phosphoenolpyruvate synthase 2020 50.48 0 1943413..1944246 + 277 26247954 ydiA c2099 - hypothetical protein 2021 53.10 0 1944403..1945449 + 348 26247955 aroH c2100 - phospho-2-dehydro-3-deoxyheptonate aldolase 2022 46.12 0 1945554..1945772 + 72 26247956 ydiE c2101 - hypothetical protein 2023 52.33 0 1945776..1947212 - 478 26247957 ydiU c2102 - hypothetical protein 2024 41.46 -1 1947275..1947988 - 237 26247958 ydiV c2103 - hypothetical protein 2025 49.46 0 1948235..1948699 - 154 26247959 nlpC c2104 - lipoprotein NlpC 2026 55.47 0 1948777..1949526 - 249 26247960 btuD c2105 - vitamin B12-transporter ATPase 2027 48.91 0 1949526..1950077 - 183 26247961 btuE c2106 - putative glutathione peroxidase 2028 54.84 0 1950139..1951119 - 326 26247962 btuC c2107 - vtamin B12-transporter permease 2029 49.61 0 1951016..1951144 - 42 26247963 - c2108 - hypothetical protein 2030 50.00 0 1951220..1951519 - 99 26247964 ihfA c2109 - integration host factor subunit alpha 2031 54.78 0 1953927..1954910 - 327 161486216 pheS c2112 - phenylalanyl-tRNA synthetase subunit alpha 2032 35.56 -2 1955194..1955238 - 14 26247966 pheM c5495 - phenylalanyl-tRNA synthetase operon leader peptide 2033 48.74 0 1955361..1955717 - 118 26247967 rplT c2113 - 50S ribosomal protein L20 2034 46.41 0 1955839..1956450 + 203 26247968 - c2114 - hypothetical protein 2035 47.82 0 1956064..1956498 - 144 26247969 infC c2115 - translation initiation factor IF-3 2036 49.40 0 1956610..1958538 - 642 26247970 thrS c2116 - threonyl-tRNA synthetase 2037 35.52 -2 1959224..1959589 + 121 26247971 - c2117 - hypothetical protein 2038 38.14 -2 1959607..1959918 + 103 26247972 - c2118 - hypothetical protein 2039 32.29 -2 1959899..1960090 + 63 26247973 - c2119 - hypothetical protein 2040 49.01 0 1960421..1961179 - 252 26247974 ydiY c2120 - hypothetical protein 2041 54.34 0 1961463..1962395 + 310 26247975 pfkB c2121 - 6-phosphofructokinase 2 2042 44.71 0 1962424..1962801 - 125 26247976 - c2122 - hypothetical protein 2043 43.99 -1 1962496..1962786 + 96 26247977 ydiZ c2123 - hypothetical protein 2044 52.50 0 1962892..1963752 + 286 26247978 yniA c2124 - hypothetical protein 2045 44.13 -1 1963793..1964329 - 178 26247979 yniB c2125 - hypothetical protein 2046 50.97 0 1964476..1965144 + 222 26247980 yniC c2126 - 2-deoxyglucose-6-phosphatase 2047 50.42 0 1965308..1965898 + 196 161486215 ydjM c2127 - hypothetical protein 2048 52.80 0 1966031..1967422 + 463 26247982 ydjN c2128 - putative symporter ydjN 2049 50.38 0 1967469..1967732 - 87 26247983 - c2129 - cell division modulator 2050 54.09 0 1967898..1968056 - 52 26247984 - c2130 - hypothetical protein 2051 51.11 0 1967915..1970176 + 753 26247985 katE c2131 - hydroperoxidase II 2052 50.20 0 1970223..1970981 - 252 26247986 ydjC c2132 - hypothetical protein 2053 46.55 0 1970994..1972400 - 468 26247987 celF c2133 - 6-phospho-beta-glucosidase 2054 41.04 -1 1972449..1973291 - 280 26247988 celD c2134 - DNA-binding transcriptional regulator ChbR 2055 48.72 0 1973299..1973649 - 116 26247989 celC c2135 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA 2056 48.49 0 1973700..1975058 - 452 26247990 celB c2136 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC 2057 43.93 -1 1975143..1975463 - 106 26247991 celA c2137 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB 2058 48.97 0 1975763..1976101 - 112 26247992 osmE c2138 - DNA-binding transcriptional activator OsmE 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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