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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1927 49.57 0 1850547..1852055 + 502 26247861 ydgA c2006 - hypothetical protein 1928 47.39 0 1852100..1853365 - 421 26247862 uidC c2007 - putative outer membrane porin protein 1929 51.75 0 1853404..1854777 - 457 26247863 uidB c2008 - glucuronide transporter 1930 51.88 0 1854774..1856585 - 603 26247864 uidA c2009 - beta-D-glucuronidase 1931 50.59 0 1856975..1857565 - 196 26247865 uidR c2010 - uid operon repressor 1932 47.27 0 1857794..1858561 - 255 26247866 hdhA c2011 - 7-alpha-hydroxysteroid dehydrogenase 1933 54.42 0 1858673..1859701 - 342 26247867 malI c2012 - DNA-binding transcriptional repressor MalI 1934 52.42 0 1859876..1861468 + 530 161486222 malX c2013 - bifunctional maltose and glucose-specific PTS system components IICB 1935 51.32 0 1861478..1862650 + 390 26247869 malY c2014 - cystathionine beta-lyase 1936 53.69 0 1862754..1863755 + 333 26247870 add c2015 - adenosine deaminase 1937 53.99 0 1863791..1864831 - 346 161486221 ydgJ c2016 - putative oxidoreductase 1938 47.22 0 1865472..1865687 + 71 26247872 ydgT c2017 - oriC-binding nucleoid-associated protein 1939 49.03 0 1865749..1866213 + 154 26247873 ydgK c2018 - hypothetical protein 1940 51.20 0 1866290..1866871 + 193 26247874 - c2019 - Na(+)-translocating NADH-quinone reductase subunit E 1941 55.09 0 1866871..1867449 + 192 26247875 - c2020 - electron transport complex protein RnfB 1942 54.87 0 1867442..1869670 + 742 26247876 - c2021 - electron transport complex protein RnfC 1943 53.07 0 1869671..1870729 + 352 26247877 rnfD c2022 - electron transport complex protein RnfD 1944 52.82 0 1870733..1871353 + 206 26247878 - c2023 - electron transport complex protein RnfG 1945 52.87 0 1871357..1872052 + 231 26247879 ydgQ c2024 - SoxR-reducing system protein RsxE 1946 48.11 0 1872052..1872687 + 211 26247880 nth c2025 - endonuclease III 1947 51.03 0 1873298..1874800 + 500 26247881 tppB c2026 - putative tripeptide transporter permease 1948 50.50 0 1874906..1875511 + 201 26247882 gst c2027 - glutathionine S-transferase 1949 52.20 0 1875555..1876418 - 287 26247883 pdxY c2028 - pyridoxamine kinase 1950 51.83 0 1876477..1877763 - 428 26247884 tyrS c2029 - tyrosyl-tRNA synthetase 1951 51.45 0 1877880..1878536 - 218 26247885 pdxH c2030 - pyridoxamine 5'-phosphate oxidase 1952 46.67 0 1878595..1878924 - 109 26247886 ydhA c2031 - lysozyme inhibitor 1953 55.50 0 1879022..1880131 - 369 26247887 anmK c2032 - anhydro-N-acetylmuramic acid kinase 1954 50.64 0 1880405..1880872 + 155 26247888 slyB c2033 - Outer membrane lipoprotein slyB precursor 1955 47.82 0 1880919..1881353 - 144 161486220 slyA c2034 - transcriptional regulator SlyA 1956 48.10 0 1881554..1881790 + 78 26247890 ydhI c2035 - hypothetical protein 1957 50.56 0 1881751..1882650 + 299 26247891 ydhJ c2036 - hypothetical protein 1958 52.81 0 1882650..1884662 + 670 26247892 ydhK c2037 - hypothetical protein 1959 52.53 0 1884663..1885235 - 190 26247893 sodC c2038 - superoxide dismutase 1960 52.06 0 1885265..1886161 - 298 26247894 ydhF c2039 - oxidoreductase ydhF 1961 48.15 0 1886210..1886587 - 125 26247895 ydhL c2040 - hypothetical protein 1962 47.15 0 1886218..1886340 + 40 26247896 - c2041 - hypothetical protein 1963 52.50 0 1886552..1887151 + 199 26247897 ydhM c2042 - putative transcriptional regulator YdhM 1964 52.91 0 1887188..1888285 + 365 26247898 nemA c2043 - N-ethylmaleimide reductase 1965 50.74 0 1888366..1888773 + 135 26247899 gloA c2044 - glyoxalase I 1966 54.32 0 1888876..1889523 + 215 26247900 rnt c2045 - ribonuclease T 1967 54.86 0 1889585..1889728 - 47 26247901 - c2046 - hypothetical protein 1968 56.25 +1 1889616..1889759 + 47 26247902 - c2047 - hypothetical protein 1969 52.59 0 1889895..1890242 - 115 26247903 ydhD c2048 - hypothetical protein 1970 48.43 0 1890577..1891404 + 275 26247904 ydhO c2049 - hypothetical protein 1971 49.83 0 1891532..1892113 + 193 26247905 sodB c2050 - superoxide dismutase 1972 54.19 0 1892259..1893428 - 389 26247906 ydhP c2051 - putative transport protein YdhP 1973 53.31 0 1893982..1895007 + 341 26247907 purR c2052 - DNA-binding transcriptional repressor PurR 1974 53.59 0 1895004..1895936 - 310 26247908 ydhB c2053 - putative DNA-binding transcriptional regulator 1975 53.22 0 1896049..1897260 + 403 26247909 ydhC c2054 - inner membrane transport protein YdhC 1976 47.87 0 1897551..1898699 + 382 26247910 cfa c2055 - cyclopropane fatty acyl phospholipid synthase 1977 47.20 0 1898739..1899380 - 213 26247911 ribE c2056 - riboflavin synthase subunit alpha 1978 53.28 0 1899595..1900968 + 457 26247912 ydhE c2057 - multidrug efflux protein 1979 51.23 0 1901009..1902265 - 418 26247913 ydhQ c2058 - hypothetical protein 1980 44.12 -1 1902839..1903144 + 101 26247914 - c2059 - hypothetical protein 1981 47.24 0 1903270..1904880 + 536 26247915 ydhS c2060 - hypothetical protein 1982 45.24 0 1904867..1904992 - 41 26247916 - c2061 - hypothetical protein 1983 52.40 0 1904886..1905698 - 270 26247917 ydhT c2062 - hypothetical protein 1984 51.27 0 1905087..1905833 + 248 26247918 - c2063 - hypothetical protein 1985 49.75 0 1905702..1906487 - 261 26247919 ydhU c2064 - PhsC protein 1986 49.86 0 1906484..1907203 - 239 26247920 - c2065 - putative ferredoxin-like protein ydhX 1987 52.47 0 1907216..1907863 - 215 26247921 ydhW c2066 - hypothetical protein 1988 48.07 0 1907867..1909969 - 700 161486219 ydhV c2067 - putative oxidoreductase 1989 48.33 0 1909990..1910616 - 208 26247923 - c2068 - hypothetical protein 1990 46.67 0 1911072..1911281 - 69 26247924 ydhZ c2069 - hypothetical protein 1991 44.96 0 1911393..1911521 + 42 26247925 - c2070 - hypothetical protein 1992 49.54 0 1911623..1913251 + 542 26247926 pykF c2071 - pyruvate kinase 1993 50.63 0 1913562..1913798 + 78 26247927 lpp c2072 - major outer membrane lipoprotein precursor 1994 52.64 0 1913861..1914865 - 334 26247928 ynhG c2073 - hypothetical protein 1995 48.20 0 1915014..1915430 - 138 26247929 ynhA c2074 - cysteine desufuration protein SufE 1996 55.04 0 1915443..1916663 - 406 26247930 - c2075 - selenocysteine lyase 1997 53.38 0 1916660..1917931 - 423 26247931 ynhC c2076 - cysteine desulfurase activator complex subunit SufD 1998 49.93 0 1917906..1918652 - 248 26247932 sufC c2077 - cysteine desulfurase ATPase component 1999 51.60 0 1918662..1920188 - 508 26247933 ynhE c2078 - cysteine desulfurase activator complex subunit SufB 2000 52.30 0 1920158..1920526 - 122 26247934 sufA c2079 - iron-sulfur cluster assembly scaffold protein 2001 43.70 -1 1921075..1921344 - 89 26247935 ydiH c2080 - hypothetical protein 2002 50.85 0 1921363..1921773 - 136 26247936 ydiI c2081 - hypothetical protein 2003 53.25 0 1921770..1924826 - 1018 26247937 ydiJ c2082 - hypothetical protein 2004 54.09 0 1925040..1926152 + 370 26247938 ydiK c2083 - putative inner membrane protein 2005 44.79 0 1926554..1926937 + 127 26247939 ydiL c2084 - hypothetical protein 2006 45.51 0 1927037..1928251 + 404 26247940 ydiM c2085 - putative transport protein YdiM 2007 45.05 0 1928472..1929743 + 423 26247941 ydiN c2086 - putative transport protein YdiN 2008 48.10 0 1929755..1930621 + 288 26247942 aroE c2087 - quinate/shikimate dehydrogenase 2009 49.93 0 1930652..1931410 + 252 26247943 aroD c2088 - 3-dehydroquinate dehydratase 2010 47.49 0 1931556..1933151 + 531 26247944 ydiF c2089 - hypothetical protein 2011 51.65 0 1933165..1934316 + 383 161486218 ydiO c2090 - putative acyl-CoA dehydrogenase 2012 42.76 -1 1934359..1935270 - 303 26247946 ydiP c2091 - putative transcriptional regulator YdiP 2013 41.24 -1 1935373..1935549 - 58 26247947 - c2092 - hypothetical protein 2014 51.24 0 1935586..1936350 + 254 161486217 ydiQ c2093 - putative electron transfer flavoprotein YdiQ 2015 53.46 0 1936370..1937308 + 312 26247949 ydiR c2094 - electron transfer flavoprotein subunit YdiR 2016 54.65 0 1937363..1938652 + 429 26247950 ydiS c2095 - hypothetical protein 2017 48.64 0 1938649..1938942 + 97 26247951 ydiT c2096 - ferredoxin-like protein ydiT 2018 50.09 0 1938945..1940645 + 566 26247952 ydiD c2097 - short chain acyl-CoA synthetase 2019 54.52 0 1940702..1943080 - 792 26247953 ppsA c2098 - phosphoenolpyruvate synthase 2020 50.48 0 1943413..1944246 + 277 26247954 ydiA c2099 - hypothetical protein 2021 53.10 0 1944403..1945449 + 348 26247955 aroH c2100 - phospho-2-dehydro-3-deoxyheptonate aldolase 2022 46.12 0 1945554..1945772 + 72 26247956 ydiE c2101 - hypothetical protein 2023 52.33 0 1945776..1947212 - 478 26247957 ydiU c2102 - hypothetical protein 2024 41.46 -1 1947275..1947988 - 237 26247958 ydiV c2103 - hypothetical protein 2025 49.46 0 1948235..1948699 - 154 26247959 nlpC c2104 - lipoprotein NlpC 2026 55.47 0 1948777..1949526 - 249 26247960 btuD c2105 - vitamin B12-transporter ATPase 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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