version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1885 44.70 0 1805113..1806009 - 298 26247818 ydeH c1963 - hypothetical protein 1886 50.28 0 1806510..1808621 - 703 26247819 dcp c1964 - dipeptidyl carboxypeptidase II 1887 50.66 0 1808677..1809438 + 253 26247820 ydfG c1965 - 3-hydroxy acid dehydrogenase 1888 50.80 0 1809527..1810213 + 228 26247821 ydfH c1966 - putative transcriptional regulator YdfH 1889 51.96 0 1810390..1810593 + 67 26247822 ydfZ c1967 - hypothetical protein 1890 49.42 0 1810629..1812089 - 486 26247823 - c1968 - oxidoreductase ydfI 1891 46.35 0 1812178..1813545 - 455 26247824 ydfJ c1969 - metabolite transport protein 1892 45.40 0 1813603..1814646 - 347 26247825 rspB c1970 - putative dehydrogenase 1893 50.88 0 1814634..1815881 - 415 26247826 rspA c1971 - starvation sensing protein rspA 1894 51.79 0 1816054..1816389 - 111 26247827 ynfA c1972 - hypothetical protein 1895 50.29 0 1816515..1816856 + 113 26247828 ynfB c1973 - hypothetical protein 1896 46.88 0 1816891..1817451 + 186 26247829 speG c1974 - spermidine N(1)-acetyltransferase 1897 44.16 -1 1817454..1818164 - 236 161486227 ynfC c1975 - hypothetical protein 1898 52.87 0 1818230..1818577 + 115 26247831 ynfD c1976 - hypothetical protein 1899 50.52 0 1818776..1821202 + 808 26247832 ynfE c1977 - putative dimethyl sulfoxide reductase chain ynfE precursor 1900 50.72 0 1821260..1823686 + 808 26247833 ynfF c1978 - dimethyl sulfoxide reductase chain ynfF precursor 1901 52.27 0 1823697..1824314 + 205 26247834 ynfG c1979 - anaerobic dimethyl sulfoxide reductase chain ynfG 1902 49.66 0 1824295..1824441 - 48 26247835 - c1980 - hypothetical protein 1903 51.23 0 1824316..1825170 + 284 26247836 ynfH c1981 - anaerobic dimethyl sulfoxide reductase chain ynfH 1904 53.66 0 1825213..1825827 + 204 161486226 ynfI c1982 - twin-argninine leader-binding protein DmsD 1905 54.10 0 1826022..1827278 + 418 161486225 ynfJ c1983 - putative voltage-gated ClC-type chloride channel ClcB 1906 52.16 0 1827231..1827926 - 231 161486224 bioD c1984 - putative dithiobiotin synthetase 1907 52.01 0 1828051..1829271 - 406 26247840 mlc c1985 - Mlc protein 1908 52.13 0 1829406..1830299 - 297 26247841 ynfL c1986 - putative transcriptional regulator YnfL 1909 52.71 0 1830406..1831659 + 417 26247842 ynfM c1987 - putative transport protein YnfM 1910 51.13 0 1832071..1832379 + 102 161486223 asr c1988 - acid shock protein precursor 1911 52.55 0 1832655..1833476 + 273 26247845 - c1990 - putative protease ydgD precursor 1912 51.21 0 1833515..1833844 - 109 26247846 ydgE c1991 - multidrug efflux system protein MdtI 1913 43.44 -1 1833831..1834196 - 121 26247847 ydgF c1992 - multidrug efflux system protein MdtJ 1914 50.14 0 1834608..1835642 + 344 26247848 tqsA c1993 - putative transport protein 1915 52.56 0 1835667..1837055 - 462 26247849 pntB c1994 - pyridine nucleotide transhydrogenase 1916 52.24 0 1837066..1838652 - 528 26247850 pntA c1995 - NAD(P) transhydrogenase subunit alpha 1917 50.79 0 1839122..1840066 + 314 26247851 ydgH c1996 - hypothetical protein 1918 53.19 0 1840225..1841634 + 469 26247852 ydgI c1997 - putative arginine/ornithine antiporter 1919 51.31 0 1841671..1842393 + 240 26247853 ydgB c1998 - short chain dehydrogenase 1920 47.32 0 1842390..1842725 - 111 26247854 ydgC c1999 - hypothetical protein 1921 48.33 0 1842794..1843573 + 259 26247855 rstA c2000 - DNA-binding transcriptional regulator RstA 1922 51.31 0 1843577..1844878 + 433 26247856 rstB c2001 - sensor protein RstB 1923 49.79 0 1844942..1845883 + 313 26247857 tus c2002 - DNA replication terminus site-binding protein 1924 54.20 0 1845880..1847283 - 467 26247858 fumC c2003 - fumarate hydratase 1925 51.12 0 1847426..1849072 - 548 26247859 fumA c2004 - fumarate hydratase class I, aerobic 1926 50.60 0 1849271..1850446 + 391 26247860 manA c2005 - mannose-6-phosphate isomerase 1927 49.57 0 1850547..1852055 + 502 26247861 ydgA c2006 - hypothetical protein 1928 47.39 0 1852100..1853365 - 421 26247862 uidC c2007 - putative outer membrane porin protein 1929 51.75 0 1853404..1854777 - 457 26247863 uidB c2008 - glucuronide transporter 1930 51.88 0 1854774..1856585 - 603 26247864 uidA c2009 - beta-D-glucuronidase 1931 50.59 0 1856975..1857565 - 196 26247865 uidR c2010 - uid operon repressor 1932 47.27 0 1857794..1858561 - 255 26247866 hdhA c2011 - 7-alpha-hydroxysteroid dehydrogenase 1933 54.42 0 1858673..1859701 - 342 26247867 malI c2012 - DNA-binding transcriptional repressor MalI 1934 52.42 0 1859876..1861468 + 530 161486222 malX c2013 - bifunctional maltose and glucose-specific PTS system components IICB 1935 51.32 0 1861478..1862650 + 390 26247869 malY c2014 - cystathionine beta-lyase 1936 53.69 0 1862754..1863755 + 333 26247870 add c2015 - adenosine deaminase 1937 53.99 0 1863791..1864831 - 346 161486221 ydgJ c2016 - putative oxidoreductase 1938 47.22 0 1865472..1865687 + 71 26247872 ydgT c2017 - oriC-binding nucleoid-associated protein 1939 49.03 0 1865749..1866213 + 154 26247873 ydgK c2018 - hypothetical protein 1940 51.20 0 1866290..1866871 + 193 26247874 - c2019 - Na(+)-translocating NADH-quinone reductase subunit E 1941 55.09 0 1866871..1867449 + 192 26247875 - c2020 - electron transport complex protein RnfB 1942 54.87 0 1867442..1869670 + 742 26247876 - c2021 - electron transport complex protein RnfC 1943 53.07 0 1869671..1870729 + 352 26247877 rnfD c2022 - electron transport complex protein RnfD 1944 52.82 0 1870733..1871353 + 206 26247878 - c2023 - electron transport complex protein RnfG 1945 52.87 0 1871357..1872052 + 231 26247879 ydgQ c2024 - SoxR-reducing system protein RsxE 1946 48.11 0 1872052..1872687 + 211 26247880 nth c2025 - endonuclease III 1947 51.03 0 1873298..1874800 + 500 26247881 tppB c2026 - putative tripeptide transporter permease 1948 50.50 0 1874906..1875511 + 201 26247882 gst c2027 - glutathionine S-transferase 1949 52.20 0 1875555..1876418 - 287 26247883 pdxY c2028 - pyridoxamine kinase 1950 51.83 0 1876477..1877763 - 428 26247884 tyrS c2029 - tyrosyl-tRNA synthetase 1951 51.45 0 1877880..1878536 - 218 26247885 pdxH c2030 - pyridoxamine 5'-phosphate oxidase 1952 46.67 0 1878595..1878924 - 109 26247886 ydhA c2031 - lysozyme inhibitor 1953 55.50 0 1879022..1880131 - 369 26247887 anmK c2032 - anhydro-N-acetylmuramic acid kinase 1954 50.64 0 1880405..1880872 + 155 26247888 slyB c2033 - Outer membrane lipoprotein slyB precursor 1955 47.82 0 1880919..1881353 - 144 161486220 slyA c2034 - transcriptional regulator SlyA 1956 48.10 0 1881554..1881790 + 78 26247890 ydhI c2035 - hypothetical protein 1957 50.56 0 1881751..1882650 + 299 26247891 ydhJ c2036 - hypothetical protein 1958 52.81 0 1882650..1884662 + 670 26247892 ydhK c2037 - hypothetical protein 1959 52.53 0 1884663..1885235 - 190 26247893 sodC c2038 - superoxide dismutase 1960 52.06 0 1885265..1886161 - 298 26247894 ydhF c2039 - oxidoreductase ydhF 1961 48.15 0 1886210..1886587 - 125 26247895 ydhL c2040 - hypothetical protein 1962 47.15 0 1886218..1886340 + 40 26247896 - c2041 - hypothetical protein 1963 52.50 0 1886552..1887151 + 199 26247897 ydhM c2042 - putative transcriptional regulator YdhM 1964 52.91 0 1887188..1888285 + 365 26247898 nemA c2043 - N-ethylmaleimide reductase 1965 50.74 0 1888366..1888773 + 135 26247899 gloA c2044 - glyoxalase I 1966 54.32 0 1888876..1889523 + 215 26247900 rnt c2045 - ribonuclease T 1967 54.86 0 1889585..1889728 - 47 26247901 - c2046 - hypothetical protein 1968 56.25 +1 1889616..1889759 + 47 26247902 - c2047 - hypothetical protein 1969 52.59 0 1889895..1890242 - 115 26247903 ydhD c2048 - hypothetical protein 1970 48.43 0 1890577..1891404 + 275 26247904 ydhO c2049 - hypothetical protein 1971 49.83 0 1891532..1892113 + 193 26247905 sodB c2050 - superoxide dismutase 1972 54.19 0 1892259..1893428 - 389 26247906 ydhP c2051 - putative transport protein YdhP 1973 53.31 0 1893982..1895007 + 341 26247907 purR c2052 - DNA-binding transcriptional repressor PurR 1974 53.59 0 1895004..1895936 - 310 26247908 ydhB c2053 - putative DNA-binding transcriptional regulator 1975 53.22 0 1896049..1897260 + 403 26247909 ydhC c2054 - inner membrane transport protein YdhC 1976 47.87 0 1897551..1898699 + 382 26247910 cfa c2055 - cyclopropane fatty acyl phospholipid synthase 1977 47.20 0 1898739..1899380 - 213 26247911 ribE c2056 - riboflavin synthase subunit alpha 1978 53.28 0 1899595..1900968 + 457 26247912 ydhE c2057 - multidrug efflux protein 1979 51.23 0 1901009..1902265 - 418 26247913 ydhQ c2058 - hypothetical protein 1980 44.12 -1 1902839..1903144 + 101 26247914 - c2059 - hypothetical protein 1981 47.24 0 1903270..1904880 + 536 26247915 ydhS c2060 - hypothetical protein 1982 45.24 0 1904867..1904992 - 41 26247916 - c2061 - hypothetical protein 1983 52.40 0 1904886..1905698 - 270 26247917 ydhT c2062 - hypothetical protein 1984 51.27 0 1905087..1905833 + 248 26247918 - c2063 - hypothetical protein 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0