version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1814 35.82 -2 1724601..1725203 + 200 26247747 - c1889 - hypothetical protein 1815 30.91 -2 1725540..1725992 + 150 26247748 - c1890 - hypothetical protein 1816 28.99 -2 1726211..1726717 + 168 26247749 - c1891 - hypothetical protein 1817 27.14 -2 1726714..1727181 + 155 26247750 - c1892 - hypothetical protein 1818 35.42 -2 1727294..1727437 + 47 26247751 - c1893 - hypothetical protein 1819 52.46 0 1728047..1728616 - 189 26247752 yddH c1894 - hypothetical protein 1820 50.35 0 1728791..1729636 + 281 26247753 nhoA c1895 - N-hydroxyarylamine O-acetyltransferase 1821 52.35 0 1729732..1730625 - 297 26247754 yddE c1896 - hypothetical protein 1822 51.84 0 1730705..1731385 - 226 26247755 narV c1897 - respiratory nitrate reductase 2 gamma chain 1823 55.75 +1 1731382..1732077 - 231 26247756 narW c1898 - respiratory nitrate reductase 2 delta chain 1824 54.05 0 1732077..1733621 - 514 26247757 narY c1899 - respiratory nitrate reductase 2 beta chain 1825 54.53 0 1733618..1737481 - 1287 26247758 narZ c1900 - respiratory nitrate reductase 2 alpha chain 1826 49.03 0 1737453..1738841 - 462 26247759 narU c1901 - nitrite extrusion protein 2 1827 49.89 0 1739114..1739995 - 293 26247760 yddG c1902 - hypothetical protein 1828 54.04 0 1740228..1743275 + 1015 26247761 fdnG c5623 - formate dehydrogenase, nitrate-inducible, major subunit 1829 54.07 0 1743252..1744196 - 314 26247762 - c1905 - hypothetical protein 1830 54.35 0 1743288..1744172 + 294 26247763 fdnH c1906 - formate dehydrogenase-N beta subunit 1831 49.54 0 1744165..1744818 + 217 26247764 fdnI c1907 - formate dehydrogenase-N subunit gamma 1832 50.18 0 1745018..1745290 + 90 26247765 - c1908 - hypothetical protein 1833 51.58 0 1745044..1745328 - 94 26247766 yddM c1909 - hypothetical protein 1834 48.35 0 1745328..1745600 - 90 26247767 - c1910 - hypothetical protein 1835 53.21 0 1745792..1746802 - 336 161486231 adhP c1911 - alcohol dehydrogenase 1836 51.71 0 1746936..1748660 - 574 26247769 sfcA c1912 - malate dehydrogenase 1837 44.93 0 1748790..1748927 - 45 26247770 rpsV c1913 - 30S ribosomal subunit S22 1838 45.83 0 1749029..1749244 - 71 161486230 - c1914 - biofilm-dependent modulation protein 1839 33.33 -2 1749411..1749551 + 46 26247772 - c1915 - hypothetical protein 1840 49.54 0 1749589..1750020 + 143 26247773 osmC c1916 - osmotically inducible protein C 1841 51.01 0 1751294..1752634 - 446 26247774 - c1918 - putative sensor kinase 1842 44.75 0 1752635..1752853 - 72 26247775 - c1919 - hypothetical protein 1843 52.50 0 1753177..1754496 - 439 26247776 yddW c1920 - lipoprotein yddW precursor 1844 48.37 0 1754627..1756162 - 511 26247777 xasA c1921 - amino acid antiporter 1845 52.38 0 1756318..1757787 - 489 26247778 gadB c1922 - glutamate decarboxylase beta 1846 46.67 0 1758079..1760874 - 931 26247779 pqqL c1923 - zinc protease pqqL 1847 46.19 0 1760919..1763291 - 790 26247780 yddB c1924 - hypothetical protein 1848 43.24 -1 1763329..1765014 - 561 26247781 yddA c1925 - ABC transporter ATP-binding protein 1849 39.13 -1 1765305..1766477 - 390 26247782 ydeM c1926 - hypothetical protein 1850 43.65 -1 1766514..1768229 - 571 26247783 ydeN c1927 - putative sulfatase ydeN precursor 1851 39.24 -1 1768598..1769359 - 253 26247784 ydeO c1928 - transcriptional regulator YdeO 1852 37.88 -2 1769435..1769632 - 65 26247785 - c1929 - hypothetical protein 1853 49.65 0 1769880..1772159 - 759 26247786 ydeP c1930 - putative oxidoreductase 1854 44.26 -1 1772498..1773412 - 304 26247787 ydeQ c1931 - fimbrial-like protein ydeQ precursor 1855 43.45 -1 1773472..1773975 - 167 26247788 ydeR c1932 - fimbrial-like protein ydeR precursor 1856 43.69 -1 1773988..1774518 - 176 26247789 ydeS c1933 - fimbrial-like protein ydeS precursor 1857 44.34 -1 1774532..1777183 - 883 26247790 - c1934 - Outer membrane usher protein fimD precursor 1858 45.29 0 1777225..1777935 - 236 26247791 - c1935 - chaperone protein fimC precursor 1859 44.44 -1 1778297..1778908 - 203 26247792 - c1936 - Type-1 fimbrial protein, A chain precursor 1860 46.74 0 1779636..1780418 - 260 26247793 - c1937 - hypothetical protein 1861 49.05 0 1780528..1781475 + 315 26247794 oprR c1938 - putative transcriptional regulator YcjZ 1862 47.90 0 1781157..1781609 + 150 26247795 - c1939 - hypothetical protein 1863 47.22 0 1781779..1783197 - 472 26247796 hipA c1940 - protein hipA 1864 45.61 0 1783191..1783475 - 94 26247797 hipB c1941 - DNA-binding transcriptional regulator HipB 1865 54.94 0 1783765..1784523 + 252 26247798 tam c1942 - trans-aconitate 2-methyltransferase 1866 47.72 0 1784527..1785492 - 321 26247799 yneE c1943 - hypothetical protein 1867 48.84 0 1787317..1788735 - 472 26247800 yneF c1945 - hypothetical protein 1868 51.39 0 1788874..1789233 - 119 26247801 yneG c1946 - hypothetical protein 1869 51.78 0 1789233..1790159 - 308 26247802 yneH c1947 - glutaminase 1870 52.51 0 1790223..1791635 - 470 26247803 yneI c1948 - aldehyde-dehydrogenase like protein 1871 53.51 0 1791712..1792593 + 293 26247804 yneJ c1949 - putative transcriptional regulator YneJ 1872 50.80 0 1792932..1794122 + 396 26247805 sotB c1950 - sugar efflux transporter 1873 50.30 0 1794147..1794812 - 221 26247806 marC c1951 - multiple drug resistance protein MarC 1874 49.20 0 1795024..1795458 + 144 26247807 marR c1952 - DNA-binding transcriptional repressor MarR 1875 44.79 0 1795479..1795862 + 127 161486229 marA c1953 - DNA-binding transcriptional activator MarA 1876 48.86 0 1795894..1796112 + 72 26247809 marB c1954 - hypothetical protein 1877 44.40 -1 1796169..1797614 - 481 26247810 celA c1955 - 6-phospho-beta-glucosidase 1878 42.65 -1 1797633..1799306 - 557 26247811 - c1956 - hypothetical protein 1879 43.81 -1 1799361..1799675 - 104 26247812 - c1957 - PTS system, cellobiose-specific IIA component 1880 42.95 -1 1799700..1801061 - 453 26247813 - c1958 - hypothetical protein 1881 41.67 -1 1801137..1801448 - 103 26247814 - c1959 - PTS system, cellobiose-specific IIB component 1882 41.06 -1 1801647..1802345 + 232 26247815 - c1960 - hypothetical protein 1883 49.78 0 1802390..1803289 - 299 161486228 ydeD c1961 - O-acetylserine/cysteine export protein 1884 49.83 0 1803484..1804671 + 395 26247817 ydeF c1962 - putative MFS-type transporter YdeE 1885 44.70 0 1805113..1806009 - 298 26247818 ydeH c1963 - hypothetical protein 1886 50.28 0 1806510..1808621 - 703 26247819 dcp c1964 - dipeptidyl carboxypeptidase II 1887 50.66 0 1808677..1809438 + 253 26247820 ydfG c1965 - 3-hydroxy acid dehydrogenase 1888 50.80 0 1809527..1810213 + 228 26247821 ydfH c1966 - putative transcriptional regulator YdfH 1889 51.96 0 1810390..1810593 + 67 26247822 ydfZ c1967 - hypothetical protein 1890 49.42 0 1810629..1812089 - 486 26247823 - c1968 - oxidoreductase ydfI 1891 46.35 0 1812178..1813545 - 455 26247824 ydfJ c1969 - metabolite transport protein 1892 45.40 0 1813603..1814646 - 347 26247825 rspB c1970 - putative dehydrogenase 1893 50.88 0 1814634..1815881 - 415 26247826 rspA c1971 - starvation sensing protein rspA 1894 51.79 0 1816054..1816389 - 111 26247827 ynfA c1972 - hypothetical protein 1895 50.29 0 1816515..1816856 + 113 26247828 ynfB c1973 - hypothetical protein 1896 46.88 0 1816891..1817451 + 186 26247829 speG c1974 - spermidine N(1)-acetyltransferase 1897 44.16 -1 1817454..1818164 - 236 161486227 ynfC c1975 - hypothetical protein 1898 52.87 0 1818230..1818577 + 115 26247831 ynfD c1976 - hypothetical protein 1899 50.52 0 1818776..1821202 + 808 26247832 ynfE c1977 - putative dimethyl sulfoxide reductase chain ynfE precursor 1900 50.72 0 1821260..1823686 + 808 26247833 ynfF c1978 - dimethyl sulfoxide reductase chain ynfF precursor 1901 52.27 0 1823697..1824314 + 205 26247834 ynfG c1979 - anaerobic dimethyl sulfoxide reductase chain ynfG 1902 49.66 0 1824295..1824441 - 48 26247835 - c1980 - hypothetical protein 1903 51.23 0 1824316..1825170 + 284 26247836 ynfH c1981 - anaerobic dimethyl sulfoxide reductase chain ynfH 1904 53.66 0 1825213..1825827 + 204 161486226 ynfI c1982 - twin-argninine leader-binding protein DmsD 1905 54.10 0 1826022..1827278 + 418 161486225 ynfJ c1983 - putative voltage-gated ClC-type chloride channel ClcB 1906 52.16 0 1827231..1827926 - 231 161486224 bioD c1984 - putative dithiobiotin synthetase 1907 52.01 0 1828051..1829271 - 406 26247840 mlc c1985 - Mlc protein 1908 52.13 0 1829406..1830299 - 297 26247841 ynfL c1986 - putative transcriptional regulator YnfL 1909 52.71 0 1830406..1831659 + 417 26247842 ynfM c1987 - putative transport protein YnfM 1910 51.13 0 1832071..1832379 + 102 161486223 asr c1988 - acid shock protein precursor 1911 52.55 0 1832655..1833476 + 273 26247845 - c1990 - putative protease ydgD precursor 1912 51.21 0 1833515..1833844 - 109 26247846 ydgE c1991 - multidrug efflux system protein MdtI 1913 43.44 -1 1833831..1834196 - 121 26247847 ydgF c1992 - multidrug efflux system protein MdtJ 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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