version 1.0
Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1563 37.94 -2 1467497..1467778 - 93 26247495 - c1630 - hypothetical protein 1564 48.10 0 1468083..1468502 + 139 26247496 umuD c1631 - DNA polymerase V subunit UmuD 1565 50.91 0 1468502..1469770 + 422 26247497 umuC c1632 - DNA polymerase V subunit UmuC 1566 52.92 0 1469815..1470345 - 176 161486244 dsbB c1633 - disulfide bond formation protein B 1567 52.14 0 1470491..1472032 - 513 161486243 nhaB c1634 - sodium/proton antiporter 1568 50.97 0 1472254..1472973 + 239 26247500 fadR c1635 - fatty acid metabolism regulator 1569 43.65 -1 1472961..1473086 - 41 26247501 - c1636 - hypothetical protein 1570 49.97 0 1473136..1474668 - 510 26247502 ycgB c1637 - hypothetical protein 1571 56.51 +1 1474998..1476296 + 432 161486242 dadA c1638 - D-amino acid dehydrogenase small subunit 1572 57.24 +1 1476306..1477376 + 356 26247504 dadX c1639 - alanine racemase 1573 52.96 0 1477433..1479169 - 578 26247505 ycgO c1640 - potassium/proton antiporter 1574 52.02 0 1479264..1480178 - 304 26247506 ldcA c1641 - L,D-carboxypeptidase A 1575 51.10 0 1480164..1480889 + 241 26247508 mltE c1643 - membrane-bound lytic murein transglycosylase E 1576 50.75 0 1480891..1481625 - 244 26247509 ycgR c1644 - hypothetical protein 1577 54.51 0 1481793..1482080 + 95 26247510 ymgE c1645 - transglycosylase associated protein 1578 49.65 0 1482130..1484121 - 663 26247511 prrA c1646 - outer membrane receptor 1579 51.93 0 1484126..1484980 - 284 26247512 modD c1647 - molybdenum transport protein ModD 1580 56.07 +1 1484977..1485684 - 235 26247513 - c1648 - hypothetical protein 1581 45.33 0 1485730..1485879 + 49 26247514 - c1649 - hypothetical protein 1582 53.75 0 1485799..1486557 - 252 26247515 - c1650 - putative iron compound ABC transporter, ATP-binding protein 1583 55.30 0 1486554..1487450 - 298 26247516 fecD c1651 - Iron(III) dicitrate transport system permease protein fecD 1584 53.76 0 1487534..1488556 - 340 26247517 - c1652 - hypothetical protein 1585 33.33 -2 1488624..1488749 - 41 26247518 - c1653 - hypothetical protein 1586 51.71 0 1488887..1490584 - 565 26247519 treA c1654 - trehalase 1587 42.13 -1 1490529..1490744 + 71 26247520 - c1655 - hypothetical protein 1588 49.96 0 1490903..1492327 - 474 26247521 ycgC c1656 - dihydroxyacetone kinase subunit M 1589 54.15 0 1492332..1493042 - 236 26247522 - c1657 - dihydroxyacetone kinase ADP-binding subunit 1590 52.41 0 1492975..1494075 - 366 26247523 ycgT c1658 - dihydroxyacetone kinase subunit DhaK 1591 51.68 0 1494264..1496192 + 642 26247524 - c1659 - DNA-binding transcriptional regulator DhaR 1592 47.19 0 1496229..1496459 - 76 26247525 - c1660 - hypothetical protein 1593 51.37 0 1496597..1497688 - 363 26247526 ychF c1661 - translation-associated GTPase 1594 50.09 0 1497805..1498389 - 194 26247527 pth c1662 - peptidyl-tRNA hydrolase 1595 53.41 0 1498667..1498945 + 92 26247528 ychH c1663 - hypothetical protein 1596 54.82 0 1499000..1500679 - 559 26247529 ychM c1664 - putative sulfate transporter YchM 1597 52.76 0 1500804..1501817 - 337 26247530 prsA c1665 - ribose-phosphate pyrophosphokinase 1598 52.70 0 1501902..1502753 - 283 26247531 ispE c1666 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1599 49.28 0 1502753..1503442 - 229 26247532 lolB c1667 - outer membrane lipoprotein LolB 1600 53.38 0 1503590..1504846 + 418 161486241 hemA c1668 - glutamyl-tRNA reductase 1601 52.72 0 1504888..1505970 + 360 26247534 prfA c1669 - peptide chain release factor 1 1602 55.52 0 1505970..1506803 + 277 26247535 hemK c1670 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1603 48.09 0 1506800..1507192 + 130 26247536 - c1671 - putative transcriptional regulator 1604 46.05 0 1507196..1508005 + 269 26247537 ychA c1672 - putative transcriptional regulator 1605 49.22 0 1508002..1508964 - 320 26247538 - c1673 - hypothetical protein 1606 50.99 0 1508041..1508895 + 284 26247539 kdsA c1674 - 2-dehydro-3-deoxyphosphooctonate aldolase 1607 51.61 0 1509044..1509322 - 92 26247540 - c1675 - hypothetical protein 1608 47.31 0 1509561..1510748 - 395 26247541 chaA c1676 - calcium/sodium:proton antiporter 1609 45.45 0 1510931..1511161 + 76 26247542 chaB c1677 - cation transport regulator 1610 55.05 0 1511271..1512002 + 243 26247543 chaC c1678 - cation transport protein chaC 1611 50.85 0 1512046..1512399 - 117 26247544 ychN c1679 - hypothetical protein 1612 51.18 0 1512584..1513978 + 464 26247545 ychP c1680 - hypothetical protein 1613 51.46 0 1513979..1514695 - 238 26247546 narL c1681 - transcriptional regulator NarL 1614 53.14 0 1514622..1516418 - 598 26247547 narX c1682 - nitrate/nitrite sensor protein NarX 1615 37.44 -2 1516444..1516662 + 72 26247548 - c1683 - hypothetical protein 1616 53.72 0 1516751..1518148 + 465 26247549 narK c1684 - nitrite extrusion protein 1 1617 54.86 0 1518541..1522284 + 1247 26247550 narG c1685 - respiratory nitrate reductase 1 alpha chain 1618 54.06 0 1522281..1523819 + 512 26247551 narH c1686 - respiratory nitrate reductase 1 beta chain 1619 55.41 0 1523816..1524526 + 236 26247552 narJ c1687 - respiratory nitrate reductase 1 delta chain 1620 55.31 0 1524526..1525203 + 225 26247553 narI c1688 - respiratory nitrate reductase 1 gamma chain 1621 51.44 0 1525279..1526322 + 347 26247554 - c1689 - hypothetical protein 1622 54.18 0 1526319..1527335 + 338 26247555 - c1690 - hypothetical protein 1623 54.28 0 1527313..1528119 + 268 26247556 - c1691 - putative gumP-like protein 1624 52.91 0 1528116..1529402 + 428 26247557 - c1692 - hypothetical protein 1625 50.57 0 1529387..1530001 + 204 26247558 - c1693 - hypothetical protein 1626 48.53 0 1529994..1531118 + 374 26247559 - c1694 - hypothetical protein 1627 52.01 0 1531105..1532196 + 363 26247560 - c1695 - hypothetical protein 1628 48.04 0 1532753..1533595 - 280 26247561 purU c1696 - formyltetrahydrofolate deformylase 1629 47.06 0 1533645..1534103 - 152 161486240 ychJ c1697 - hypothetical protein 1630 50.05 0 1534177..1535121 + 314 26247563 ychK c1698 - hypothetical protein 1631 48.32 0 1535213..1536226 + 337 26247564 hnr c1699 - response regulator of RpoS 1632 46.97 0 1536428..1537336 + 302 26247565 galU c1700 - UTP--glucose-1-phosphate uridylyltransferase subunit GalU 1633 47.10 0 1537480..1537893 - 137 26247566 hns c1701 - global DNA-binding transcriptional dual regulator H-NS 1634 37.21 -2 1537985..1538113 - 42 26247567 - c1702 - hypothetical protein 1635 42.39 -1 1538497..1539114 + 205 26247568 tdk c1703 - thymidine kinase 1636 53.73 0 1539241..1540446 - 401 26247569 - c1704 - transposase insG 1637 50.49 0 1540572..1543247 - 891 26247570 adhE c1705 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1638 47.53 0 1543724..1544371 + 215 26247571 ychE c1706 - hypothetical protein 1639 47.30 0 1545037..1546740 + 567 26247572 oppA c1707 - periplasmic oligopeptide-binding protein precursor 1640 46.36 0 1546826..1547746 + 306 26247573 oppB c1708 - oligopeptide transporter permease 1641 52.48 0 1547761..1548669 + 302 26247574 oppC c1709 - oligopeptide transport system permease protein oppC 1642 51.78 0 1548681..1549694 + 337 26247575 oppD c1710 - oligopeptide transporter ATP-binding component 1643 52.24 0 1549691..1550695 + 334 26247576 oppF c1711 - oligopeptide transport ATP-binding protein oppF 1644 47.88 0 1550748..1551077 - 109 161486239 yciU c1712 - dsDNA-mimic protein 1645 51.54 0 1551112..1552572 - 486 26247578 cls c1713 - cardiolipin synthetase 1646 48.77 0 1552604..1552888 + 94 26247579 - c1714 - hypothetical protein 1647 42.61 -1 1552943..1554214 - 423 26247580 kch c1715 - voltage-gated potassium channel 1648 49.49 0 1554496..1554792 - 98 161486238 yciI c1716 - YciI-like protein 1649 52.86 0 1554965..1555732 + 255 26247582 tonB c1717 - transport protein TonB 1650 58.13 +1 1555198..1555443 - 81 26247583 - c1718 - hypothetical protein 1651 48.87 0 1555772..1556170 - 132 26247584 yciA c1719 - acyl-CoA thioester hydrolase 1652 46.48 0 1556275..1556814 - 179 26247585 ispZ c1720 - intracellular septation protein A 1653 49.33 0 1556844..1557587 - 247 26247586 yciC c1721 - hypothetical protein 1654 49.23 0 1557866..1558582 + 238 26247587 ompW c1722 - outer membrane protein W 1655 40.63 -1 1558641..1559147 - 168 26247588 yciE c1723 - hypothetical protein 1656 43.06 -1 1559193..1559696 - 167 26247589 yciF c1724 - hypothetical protein 1657 55.14 0 1560020..1560826 - 268 26247590 trpA c1725 - tryptophan synthase subunit alpha 1658 54.52 0 1560826..1562019 - 397 26247591 trpB c1726 - tryptophan synthase subunit beta 1659 56.02 +1 1563393..1564988 - 531 26247592 trpD c1729 - bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase 1660 54.00 0 1564988..1566550 - 520 26247593 trpE c1730 - anthranilate synthase component I 1661 44.44 -1 1566642..1566686 - 14 26247594 trpL c5494 - Trp operon leader peptide 1662 53.97 0 1566824..1567705 + 293 26247595 trpH c1731 - protein trpH 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0