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Escherichia coli CFT073, complete genome - 1..5231428 5339 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 980 53.22 0 970601..972259 + 552 26246901 ybjD c1011 - hypothetical protein 981 50.05 0 972256..973248 - 330 26246902 ybjX c1012 - hypothetical protein 982 39.26 -1 973317..973451 + 44 26246903 - c1013 - hypothetical protein 983 53.32 0 973363..974478 + 371 161486265 macA c1014 - macrolide transporter subunit MacA 984 53.04 0 976078..976422 + 114 26246905 - c1016 - hypothetical protein 985 47.06 0 976495..976749 - 84 26246906 cspD c1017 - stationary phase/starvation inducible regulatory protein CspD 986 44.55 -1 977042..977362 + 106 26246907 clpS c1018 - ATP-dependent Clp protease adaptor protein ClpS 987 52.88 0 977393..979669 + 758 161486264 clpA c1019 - ATP-dependent Clp protease ATP-binding subunit 988 48.40 0 980354..980572 - 72 26246910 infA c1021 - translation initiation factor IF-1 989 53.62 0 980857..981561 - 234 26246911 aat c1022 - leucyl/phenylalanyl-tRNA--protein transferase 990 53.77 0 981603..983324 - 573 26246912 cydC c1023 - cysteine/glutathione ABC transporter membrane/ATP-binding component 991 53.54 0 983325..985091 - 588 26246913 cydD c1024 - cysteine/glutathione ABC transporter membrane/ATP-binding component 992 51.57 0 985214..986299 - 361 26246914 trxB c1025 - thioredoxin reductase 993 47.68 0 986723..987217 + 164 161486263 lrp c1026 - leucine-responsive transcriptional regulator 994 53.73 0 987352..991395 + 1347 26246916 ftsK c1027 - DNA translocase FtsK 995 50.89 0 991551..992165 + 204 26246917 lolA c1028 - outer-membrane lipoprotein carrier protein 996 53.57 0 992176..993519 + 447 26246918 ycaJ c1029 - recombination factor protein RarA 997 52.67 0 993610..994902 + 430 26246919 serS c1030 - seryl-tRNA synthetase 998 51.98 0 995141..997585 + 814 26246920 dmsA c1031 - anaerobic dimethyl sulfoxide reductase chain A precursor 999 51.62 0 997596..998213 + 205 26246921 dmsB c1032 - anaerobic dimethyl sulfoxide reductase chain B 1000 53.94 0 998215..999078 + 287 26246922 dmsC c1033 - anaerobic dimethyl sulfoxide reductase chain C 1001 46.42 0 999114..999839 - 241 26246923 ycaC c1034 - hypothetical protein 1002 41.86 -1 999895..1000023 - 42 26246924 - c1035 - hypothetical protein 1003 45.65 0 999971..1000108 + 45 26246925 - c1036 - hypothetical protein 1004 51.78 0 1000054..1001202 + 382 26246926 ycaD c1037 - MFS family transporter 1005 49.93 0 1001299..1002039 - 246 161486262 pflA c1038 - pyruvate formate lyase-activating enzyme 1 1006 51.93 0 1003279..1004493 + 404 26246928 - c1040 - hypothetical protein 1007 43.27 -1 1004569..1005765 - 398 26246929 focA_2 c1042 - formate transporter 1008 50.84 0 1005832..1007625 - 597 26246930 ycaO c1043 - hypothetical protein 1009 47.91 0 1007722..1008414 + 230 26246931 ycaP c1044 - hypothetical protein 1010 49.59 0 1008613..1009701 + 362 26246932 serC c1045 - phosphoserine aminotransferase 1011 50.00 0 1009772..1011055 + 427 26246933 aroA c1046 - 3-phosphoshikimate 1-carboxyvinyltransferase 1012 48.97 0 1011216..1011989 + 257 26246934 ycaL c1047 - putative metalloprotease ycaL 1013 53.65 0 1012162..1012845 + 227 26246935 cmk c1048 - cytidylate kinase 1014 51.19 0 1012956..1014629 + 557 26246936 rpsA c1049 - 30S ribosomal protein S1 1015 49.12 0 1014789..1015073 + 94 26246937 ihfB c1050 - integration host factor subunit beta 1016 48.22 0 1014798..1015106 - 102 26246938 - c1051 - hypothetical protein 1017 49.49 0 1015279..1017543 + 754 161486261 ycaI c1052 - hypothetical protein 1018 50.31 0 1017580..1019328 + 582 26246941 msbA c1054 - lipid transporter ATP-binding/permease protein 1019 52.15 0 1020349..1021581 + 410 26246942 ycaQ c1057 - hypothetical protein 1020 48.09 0 1021633..1021815 + 60 26246943 ycaR c1058 - hypothetical protein 1021 53.01 0 1021812..1022558 + 248 26246944 kdsB c1059 - 3-deoxy-manno-octulosonate cytidylyltransferase 1022 51.90 0 1022712..1023605 + 297 26246945 ycbJ c1060 - hypothetical protein 1023 51.79 0 1023582..1024361 - 259 26246946 ycbC c1061 - hypothetical protein 1024 46.06 0 1024264..1024428 - 54 26246947 - c1062 - hypothetical protein 1025 51.75 0 1024485..1025282 + 265 26246948 smtA c1063 - putative metallothionein SmtA 1026 52.46 0 1025279..1026601 + 440 26246949 mukF c1064 - condesin subunit F 1027 51.50 0 1026555..1027286 + 243 26246950 mukE c1065 - condesin subunit E 1028 55.48 0 1027286..1031746 + 1486 26246951 mukB c1066 - cell division protein MukB 1029 52.92 0 1032007..1033854 + 615 26246952 ycbB c1067 - hypothetical protein 1030 50.18 0 1034026..1034583 + 185 26246953 ycbK c1068 - hypothetical protein 1031 51.85 0 1034610..1035257 + 215 26246954 ycbL c1069 - hypothetical protein 1032 52.06 0 1035307..1036497 - 396 26246955 aspC c1070 - aromatic amino acid aminotransferase 1033 47.84 0 1036682..1037770 - 362 26246956 ompF c1071 - outer membrane protein F 1034 52.61 0 1038373..1039773 - 466 26246957 asnC c1072 - asparaginyl-tRNA synthetase 1035 51.64 0 1039942..1041192 - 416 26246958 pncB c1073 - nicotinate phosphoribosyltransferase 1036 49.46 0 1039960..1040145 + 61 26246959 - c1074 - hypothetical protein 1037 53.27 0 1041410..1044022 + 870 26246960 pepN c1075 - aminopeptidase N 1038 55.99 +1 1044217..1044984 - 255 26246961 ssuB c1076 - aliphatic sulfonates transport ATP-binding subunit 1039 54.97 0 1044981..1045775 - 264 26246962 ssuC c1077 - alkanesulfonate transporter permease subunit 1040 56.98 +1 1045784..1046929 - 381 26246963 ycbN c1078 - alkanesulfonate monooxygenase 1041 52.81 0 1046926..1047885 - 319 161486260 ycbO c1079 - alkanesulfonate transporter substrate-binding subunit 1042 54.17 0 1047878..1048453 - 191 26246965 ycbP c1080 - NAD(P)H-dependent FMN reductase 1043 46.44 0 1048663..1049700 + 345 26246966 pyrD c1081 - dihydroorotate dehydrogenase 2 1044 48.19 0 1049838..1050416 + 192 26246967 ycbW c1082 - hypothetical protein 1045 50.63 0 1050413..1051522 - 369 26246968 ycbX c1083 - hypothetical protein 1046 54.39 0 1051620..1053728 + 702 26246969 ycbY c1084 - 23S rRNA m(2)G2445 methyltransferase 1047 52.10 0 1053740..1055647 + 635 26246970 uup c1085 - ABC transporter ATPase component 1048 51.99 0 1055777..1057030 + 417 26246971 pqiA c1086 - paraquat-inducible protein A 1049 50.09 0 1056975..1058675 + 566 26246972 pqiB c1087 - paraquat-inducible protein B 1050 52.84 0 1058672..1059235 + 187 26246973 ymbA c1088 - hypothetical protein 1051 41.67 -1 1059400..1059531 - 43 26246974 - c1089 - hypothetical protein 1052 52.60 0 1059727..1060245 - 172 161486259 fabA c1090 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1053 51.56 0 1060314..1062074 - 586 26246976 - c1091 - putative protease La-like protein 1054 47.02 0 1062260..1062712 + 150 26246977 ycbG c1092 - hypothetical protein 1055 52.89 0 1062790..1063929 - 379 26246978 ompA c1093 - outer membrane protein A 1056 36.99 -2 1063996..1064214 + 72 26246979 - c1094 - hypothetical protein 1057 48.26 0 1064198..1064713 - 171 26246980 sulA c1095 - SOS cell division inhibitor 1058 47.78 0 1064926..1065555 + 209 26246981 yccR c1096 - hypothetical protein 1059 52.01 0 1065518..1067680 - 720 26246982 yccS c1097 - hypothetical protein 1060 48.77 0 1067690..1068136 - 148 26246983 yccF c1098 - hypothetical protein 1061 52.65 0 1068259..1070313 + 684 161486258 helD c1099 - DNA helicase IV 1062 52.94 0 1070345..1070803 - 152 161486257 mgsA c1100 - methylglyoxal synthase 1063 50.23 0 1070899..1071561 - 220 26246986 yccT c1101 - hypothetical protein 1064 52.12 0 1071653..1072147 + 164 26246987 - c1102 - hypothetical protein 1065 55.05 0 1072116..1072511 + 131 26246988 - c1103 - hypothetical protein 1066 53.39 0 1072192..1072560 - 122 26246989 yccV c1104 - hypothetical protein 1067 51.97 0 1072567..1073757 - 396 26246990 yccW c1105 - hypothetical protein 1068 50.38 0 1073732..1074130 + 132 26246991 - c1106 - putative acylphosphatase 1069 48.48 0 1074127..1074456 - 109 26246992 yccK c1107 - sulfurtransferase TusE 1070 51.52 0 1074548..1075207 - 219 26246995 yccA c1110 - hypothetical protein 1071 56.03 +1 1075769..1075909 - 46 26246997 - c1112 - hypothetical protein 1072 55.93 +1 1075901..1077046 + 381 26246998 hyaA c1113 - hydrogenase-1 small chain precursor 1073 56.24 +1 1077043..1078836 + 597 26246999 hyaB c1114 - hydrogenase 1 large subunit 1074 51.13 0 1078855..1079562 + 235 26247000 hyaC c1115 - hydrogenase 1 b-type cytochrome subunit 1075 59.01 +1 1079559..1080146 + 195 26247001 hyaD c1116 - hydrogenase 1 maturation protease 1076 55.14 0 1080143..1080541 + 132 26247002 hyaE c1117 - hydrogenase-1 operon protein HyaE 1077 54.90 0 1080538..1081395 + 285 26247003 hyaF c1118 - hydrogenase-1 operon protein HyaF 1078 54.11 0 1081529..1083073 + 514 26247004 appC c1119 - cytochrome bd-II oxidase subunit I 1079 53.12 0 1083085..1084221 + 378 26247005 appB c1120 - cytochrome bd-II oxidase subunit II 50.18 MEAN 5.55 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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