version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 878 47.15 0 1002112..1002654 + 180 16128909 ycbU b0942 - predicted fimbrial-like adhesin protein 879 47.29 0 1002662..1003177 + 171 90111191 ycbV b0943 - predicted fimbrial-like adhesin protein 880 51.76 0 1003170..1003880 + 236 90111192 ycbF b0944 - predicted periplasmic pilini chaperone 881 46.98 0 1003991..1005001 + 336 16128912 pyrD b0945 - dihydro-orotate oxidase, FMN-linked 882 49.36 0 1005175..1005717 + 180 90111193 ycbW b0946 - predicted protein 883 50.45 0 1005714..1006823 - 369 16128914 ycbX b0947 - predicted 2Fe-2S cluster-containing protein 884 54.24 0 1007067..1009175 + 702 16128915 rlmL b0948 - predicted methyltransferase 885 52.41 0 1009187..1011094 + 635 16128916 uup b0949 - fused predicted transporter subunits of ABC superfamily: ATP-binding components 886 52.23 0 1011224..1012477 + 417 16128917 pqiA b0950 - paraquat-inducible membrane protein A 887 50.21 0 1012482..1014122 + 546 16128918 pqiB b0951 - paraquat-inducible protein B 888 52.13 0 1014119..1014682 + 187 145698237 ymbA b0952 - conserved protein 889 54.17 0 1014938..1015105 + 55 16128920 rmf b0953 - ribosome modulation factor 890 53.18 0 1015175..1015693 - 172 16128921 fabA b0954 - beta-hydroxydecanoyl thioester dehydrase 891 51.79 0 1015762..1017522 - 586 16128922 ycbZ b0955 - predicted peptidase 892 46.14 -1 1017708..1018160 + 150 16128923 ycbG b0956 - conserved protein 893 53.79 0 1018236..1019276 - 346 16128924 ompA b0957 - outer membrane protein A (3a;II*;G;d) 894 48.24 0 1019633..1020142 - 169 16128925 sulA b0958 - SOS cell division inhibitor 895 48.10 0 1020361..1020990 + 209 16128926 sxy b0959 - conserved protein 896 52.23 0 1020953..1023106 - 717 90111194 yccS b0960 - predicted inner membrane protein 897 48.32 0 1023125..1023571 - 148 16128928 yccF b0961 - conserved inner membrane protein 898 53.04 0 1023694..1025748 + 684 16128929 helD b0962 - DNA helicase IV 899 52.72 0 1025780..1026238 - 152 90111195 mgsA b0963 - methylglyoxal synthase 900 50.68 0 1026334..1026996 - 220 16128931 yccT b0964 - conserved protein 901 54.35 0 1027169..1027582 + 137 90111196 yccU b0965 - predicted CoA-binding protein with NAD(P)-binding Rossmann-fold domain 902 55.66 0 1027627..1027944 - 105 145698238 hspQ b0966 - DNA-binding protein, hemimethylated 903 51.81 0 1028002..1029192 - 396 145698239 yccW b0967 - predicted methyltransferase 904 52.33 0 1029287..1029565 + 92 16128935 yccX b0968 - predicted acylphosphatase 905 46.67 0 1029562..1029891 - 109 90111197 yccK b0969 - predicted sulfite reductase subunit 906 51.21 0 1029982..1030641 - 219 16128937 yccA b0970 - inner membrane protein 907 56.12 +1 1031362..1032480 + 372 16128938 hyaA b0972 - hydrogenase 1, small subunit 908 56.52 +1 1032477..1034270 + 597 16128939 hyaB b0973 - hydrogenase 1, large subunit 909 51.84 0 1034289..1034996 + 235 16128940 hyaC b0974 - hydrogenase 1, b-type cytochrome subunit 910 58.84 +1 1034993..1035580 + 195 16128941 hyaD b0975 - protein involved in processing of HyaA and HyaB proteins 911 56.64 +1 1035577..1035975 + 132 16128942 hyaE b0976 - protein involved in processing of HyaA and HyaB proteins 912 54.90 0 1035972..1036829 + 285 16128943 hyaF b0977 - protein involved in nickel incorporation into hydrogenase-1 proteins 913 54.05 0 1036963..1038507 + 514 16128944 appC b0978 - cytochrome bd-II oxidase, subunit I 914 53.21 0 1038519..1039655 + 378 16128945 appB b0979 - cytochrome bd-II oxidase, subunit II 915 46.24 -1 1039668..1039760 + 30 145698240 yccB b4592 - hypothetical protein 916 53.89 0 1039840..1041138 + 432 16128946 appA b0980 - phosphoanhydride phosphorylase 917 50.53 0 1041253..1043433 - 726 16128947 etk b0981 - cryptic autophosphorylating protein tyrosine kinase Etk 918 52.35 0 1043453..1043899 - 148 90111198 etp b0982 - phosphotyrosine-protein phosphatase 919 50.96 0 1043887..1045026 - 379 16128949 gfcE b0983 - predicted exopolysaccharide export protein 920 51.98 0 1045072..1047168 - 698 16128950 gfcD b0984 - conserved protein 921 52.34 0 1047168..1047914 - 248 16128951 gfcC b0985 - conserved protein 922 47.60 0 1047911..1048555 - 214 16128952 gfcB b0986 - predicted outer membrane lipoprotein 923 57.52 +1 1048662..1048967 - 101 90111199 gfcA b0987 - predicted protein 924 52.90 0 1049056..1049331 + 91 94541103 insA b4516 - KpLE2 phage-like element; IS1 repressor protein InsA 925 54.76 0 1049250..1049753 + 167 16128954 insB b0988 - IS1 transposase InsAB' 926 46.95 0 1050186..1050398 - 70 16128955 cspH b0989 - stress protein, member of the CspA-family 927 44.13 -1 1050684..1050896 + 70 16128956 cspG b0990 - DNA-binding transcriptional regulator 928 41.56 -2 1051070..1051300 + 76 16128957 ymcE b0991 - cold shock gene 929 39.66 -2 1051290..1051463 + 57 94541104 gnsA b4517 - predicted regulator of phosphatidylethanolamine synthesis 930 49.16 0 1051512..1052585 - 357 16128958 yccM b0992 - predicted 4Fe-4S membrane protein 931 53.77 0 1052657..1055401 - 914 90111200 torS b0993 - hybrid sensory histidine kinase in two-component regulatory system with TorR 932 53.45 0 1055484..1056512 + 342 16128960 torT b0994 - periplasmic sensory protein associated with the TorRS two-component regulatory system 933 52.38 0 1056485..1057177 - 230 16128961 torR b0995 - DNA-binding response regulator in two-component regulatory system with TorS 934 51.24 0 1057307..1058479 + 390 16128962 torC b0996 - trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit 935 55.32 0 1058479..1061025 + 848 16128963 torA b0997 - trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 936 53.33 0 1061022..1061621 + 199 16128964 torD b0998 - chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I 937 54.25 0 1061773..1062078 - 101 16128965 cbpM b0999 - modulator of CbpA co-chaperone 938 52.88 0 1062078..1062998 - 306 16128966 cbpA b1000 - curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK 939 34.13 -2 1063259..1064515 + 418 16128967 yccE b1001 - predicted protein 940 51.61 0 1064808..1066049 + 413 16128968 agp b1002 - glucose-1-phosphatase/inositol phosphatase 941 46.93 0 1066087..1066314 - 75 16128969 yccJ b1003 - predicted protein 942 53.94 0 1066335..1066931 - 198 16128970 wrbA b1004 - NAD(P)H:quinone oxidoreductase 943 51.15 0 1067304..1067477 + 57 94541090 ymdF b4518 - conserved protein 944 54.03 0 1067734..1069062 - 442 90111201 rutG b1006 - predicted transporter 945 58.99 +1 1069083..1069577 - 164 90111202 rutF b1007 - predicted oxidoreductase, flavin:NADH component 946 57.19 +1 1069588..1070178 - 196 16128974 rutE b1008 - predicted oxidoreductase 947 57.93 +1 1070188..1070988 - 266 16128975 rutD b1009 - predicted hydrolase 948 54.01 0 1070996..1071382 - 128 16128976 rutC b1010 - conserved protein 949 55.41 0 1071394..1072086 - 230 90111203 rutB b1011 - predicted enzyme 950 55.09 0 1072086..1073234 - 382 49176071 rutA b1012 - predicted monooxygenase 951 51.33 0 1073465..1074103 + 212 16128979 rutR b1013 - predicted DNA-binding transcriptional regulator 952 56.98 +1 1074143..1078105 - 1320 16128980 putA b1014 - fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 953 53.68 0 1078528..1080036 + 502 16128981 putP b1015 - proline:sodium symporter 954 51.33 0 1081466..1082593 + 375 16128982 efeO b1018 - conserved protein 955 53.77 0 1082599..1083870 + 423 16128983 efeB b1019 - conserved protein 956 52.21 0 1084215..1085279 + 354 16128984 phoH b1020 - conserved protein with nucleoside triphosphate hydrolase domain 957 44.20 -1 1085329..1085742 - 137 16128985 pgaD b1021 - predicted inner membrane protein 958 46.68 0 1085744..1087069 - 441 16128986 pgaC b1022 - predicted glycosyl transferase 959 44.43 -1 1087062..1089080 - 672 16128987 pgaB b1023 - predicted enzyme associated with biofilm formation 960 47.32 0 1089089..1091512 - 807 16128988 pgaA b1024 - predicted outer membrane protein 961 38.56 -2 1092099..1093457 + 452 16128989 ycdT b1025 - predicted diguanylate cyclase 962 55.13 0 1093498..1094364 - 288 16128990 insF b1026 - IS3 element protein InsF 963 50.16 0 1094361..1094669 - 102 16128991 insE b1027 - IS3 element protein InsE 964 40.53 -2 1095066..1096052 + 328 16128993 ycdU b1029 - predicted inner membrane protein 965 51.22 0 1097109..1098047 + 312 90111205 ghrA b1033 - 2-ketoacid reductase 966 48.37 0 1098102..1098839 + 245 16128997 ycdX b1034 - predicted zinc-binding hydrolase 967 53.51 0 1098863..1099417 + 184 16128998 ycdY b1035 - conserved protein 968 53.86 0 1099519..1100010 + 163 90111206 ycdZ b1036 - predicted inner membrane protein 969 50.12 0 1100074..1100907 - 277 16129000 csgG b1037 - outer membrane lipoprotein 970 42.45 -1 1100934..1101350 - 138 16129001 csgF b1038 - predicted transport protein 971 43.08 -1 1101375..1101764 - 129 16129002 csgE b1039 - predicted transport protein 972 41.78 -1 1101769..1102419 - 216 16129003 csgD b1040 - DNA-binding transcriptional activator in two-component regulatory system 973 41.89 -1 1103174..1103629 + 151 16129004 csgB b1041 - curlin nucleator protein, minor subunit in curli complex 974 51.10 0 1103670..1104125 + 151 16129005 csgA b1042 - cryptic curlin major subunit 975 42.64 -1 1104184..1104516 + 110 16129006 csgC b1043 - predicted curli production protein 976 43.59 -1 1104637..1104948 + 103 16129007 ymdA b1044 - predicted protein 977 51.69 0 1105043..1105576 + 177 16129008 ymdB b1045 - conserved protein 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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