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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 808 54.04 0 908554..910272 - 572 16128839 poxB b0871 - pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding 809 55.42 0 910405..911373 - 322 16128840 hcr b0872 - HCP oxidoreductase, NADH-dependent 810 54.75 0 911385..913037 - 550 90111180 hcp b0873 - hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases 811 48.22 0 913181..914080 - 299 90111181 ybjE b0874 - predicted transporter 812 52.30 0 914575..915270 - 231 16128843 aqpZ b0875 - aquaporin 813 53.10 0 915696..917354 + 552 16128844 ybjD b0876 - conserved protein with nucleoside triphosphate hydrolase domain 814 49.95 0 917351..918343 - 330 16128845 ybjX b0877 - conserved protein 815 53.05 0 918458..919573 + 371 90111182 macA b0878 - macrolide transporter subunit, membrane fusion protein (MFP) component 816 53.93 0 919570..921516 + 648 16128847 macB b0879 - fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component 817 48.44 0 921589..921813 - 74 16128848 cspD b0880 - cold shock protein homolog 818 45.17 -1 922136..922456 + 106 16128849 clpS b0881 - regulatory protein for ClpA substrate specificity 819 52.61 0 922487..924763 + 758 16128850 clpA b0882 - ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 820 48.40 0 925448..925666 - 72 16128851 infA b0884 - translation initiation factor IF-1 821 54.04 0 925951..926655 - 234 16128852 aat b0885 - leucyl/phenylalanyl-tRNA-protein transferase 822 53.77 0 926697..928418 - 573 16128853 cydC b0886 - fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component 823 53.65 0 928419..930185 - 588 16128854 cydD b0887 - fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component 824 53.62 0 930308..931273 - 321 16128855 trxB b0888 - thioredoxin reductase, FAD/NAD(P)-binding 825 47.88 0 931818..932312 + 164 16128856 lrp b0889 - DNA-binding transcriptional dual regulator, leucine-binding 826 54.01 0 932447..936436 + 1329 16128857 ftsK b0890 - DNA-binding membrane protein required for chromosome resolution and partitioning 827 50.98 0 936595..937206 + 203 145698236 lolA b0891 - chaperone for lipoproteins 828 53.57 0 937217..938560 + 447 16128859 rarA b0892 - recombination protein 829 52.67 0 938651..939943 + 430 16128860 serS b0893 - seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine 830 52.72 0 940182..942626 + 814 90111183 dmsA b0894 - dimethyl sulfoxide reductase, anaerobic, subunit A 831 51.78 0 942637..943254 + 205 16128862 dmsB b0895 - dimethyl sulfoxide reductase, anaerobic, subunit B 832 54.63 0 943256..944119 + 287 16128863 dmsC b0896 - dimethyl sulfoxide reductase, anaerobic, subunit C 833 46.25 -1 944154..944780 - 208 16128864 ycaC b0897 - predicted hydrolase 834 52.05 0 945094..946242 + 382 16128865 ycaD b0898 - predicted transporter 835 47.17 0 946452..947882 + 476 90111184 ycaM b0899 - predicted transporter 836 46.64 0 947883..948791 - 302 16128867 ycaN b0900 - predicted DNA-binding transcriptional regulator 837 42.81 -1 948891..949481 + 196 16128868 ycaK b0901 - conserved protein 838 50.34 0 949563..950303 - 246 16128869 pflA b0902 - pyruvate formate lyase activating enzyme 1 839 51.20 0 950495..952777 - 760 16128870 pflB b0903 - pyruvate formate lyase I 840 48.95 0 952832..953689 - 285 16128871 focA b0904 - formate transporter 841 51.56 0 954095..955855 - 586 90111185 ycaO b0905 - conserved protein 842 47.62 0 955985..956677 + 230 16128873 ycaP b0906 - conserved inner membrane protein 843 50.14 0 956876..957964 + 362 16128874 serC b0907 - 3-phosphoserine/phosphohydroxythreonine aminotransferase 844 50.78 0 958035..959318 + 427 16128875 aroA b0908 - 5-enolpyruvylshikimate-3-phosphate synthetase 845 49.93 0 959487..960251 + 254 90111186 ycaL b0909 - predicted peptidase with chaperone function 846 53.65 0 960424..961107 + 227 16128877 cmk b0910 - cytidylate kinase 847 51.19 0 961218..962891 + 557 16128878 rpsA b0911 - 30S ribosomal subunit protein S1 848 49.12 0 963051..963335 + 94 16128879 ihfB b0912 - integration host factor (IHF), DNA-binding protein, beta subunit 849 49.49 0 963543..965807 + 754 90111187 ycaI b0913 - conserved inner membrane protein 850 50.89 0 965844..967592 + 582 16128881 msbA b0914 - fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component 851 54.71 0 967589..968575 + 328 16128882 lpxK b0915 - lipid A 4'kinase 852 52.31 0 968612..969844 + 410 16128883 ycaQ b0916 - conserved protein 853 48.09 0 969896..970078 + 60 16128884 ycaR b0917 - conserved protein 854 52.74 0 970075..970821 + 248 16128885 kdsB b0918 - 3-deoxy-manno-octulosonate cytidylyltransferase 855 52.46 0 970975..971868 + 297 16128886 ycbJ b0919 - conserved protein 856 52.18 0 971845..972624 - 259 16128887 ycbC b0920 - conserved inner membrane protein 857 51.53 0 972760..973545 + 261 16128888 smtA b0921 - predicted S-adenosyl-L-methionine-dependent methyltransferase 858 52.83 0 973542..974864 + 440 16128889 mukF b0922 - Involved in chromosome partioning, Ca2+ binding protein 859 52.36 0 974872..975549 + 225 16128890 mukE b0923 - protein involved in chromosome partitioning 860 55.66 0 975549..980009 + 1486 16128891 mukB b0924 - fused chromosome partitioning protein: predicted nucleotide hydrolase/conserved protein/conserved protein 861 53.14 0 980270..982117 + 615 16128892 ycbB b0925 - predicted carboxypeptidase 862 49.73 0 982298..982846 + 182 16128893 ycbK b0926 - conserved protein 863 51.54 0 982873..983520 + 215 16128894 ycbL b0927 - predicted metal-binding enzyme 864 52.23 0 983742..984932 - 396 16128895 aspC b0928 - aspartate aminotransferase, PLP-dependent 865 47.75 0 985117..986205 - 362 16128896 ompF b0929 - outer membrane porin 1a (Ia;b;F) 866 52.39 0 986808..988208 - 466 16128897 asnS b0930 - asparaginyl tRNA synthetase 867 51.21 0 988377..989579 - 400 16128898 pncB b0931 - nicotinate phosphoribosyltransferase 868 53.46 0 989845..992457 + 870 16128899 pepN b0932 - aminopeptidase N 869 55.60 0 992500..993267 - 255 16128900 ssuB b0933 - alkanesulfonate transporter subunit 870 55.81 0 993264..994055 - 263 90111188 ssuC b0934 - alkanesulfonate transporter subunit 871 56.98 +1 994066..995211 - 381 16128902 ssuD b0935 - alkanesulfonate monooxygenase, FMNH(2)-dependent 872 52.40 0 995208..996167 - 319 90111189 ssuA b0936 - alkanesulfonate transporter subunit 873 54.17 0 996160..996735 - 191 16128904 ssuE b0937 - NAD(P)H-dependent FMN reductase 874 42.41 -1 997091..997630 + 179 90111190 ycbQ b0938 - predicted fimbrial-like adhesin protein 875 45.01 -1 997713..998414 + 233 16128906 ycbR b0939 - predicted periplasmic pilin chaperone 876 47.87 0 998439..1001039 + 866 16128907 ycbS b0940 - predicted outer membrane usher protein 877 48.27 0 1001030..1002100 + 356 16128908 ycbT b0941 - predicted fimbrial-like adhesin protein 878 47.15 0 1002112..1002654 + 180 16128909 ycbU b0942 - predicted fimbrial-like adhesin protein 879 47.29 0 1002662..1003177 + 171 90111191 ycbV b0943 - predicted fimbrial-like adhesin protein 880 51.76 0 1003170..1003880 + 236 90111192 ycbF b0944 - predicted periplasmic pilini chaperone 881 46.98 0 1003991..1005001 + 336 16128912 pyrD b0945 - dihydro-orotate oxidase, FMN-linked 882 49.36 0 1005175..1005717 + 180 90111193 ycbW b0946 - predicted protein 883 50.45 0 1005714..1006823 - 369 16128914 ycbX b0947 - predicted 2Fe-2S cluster-containing protein 884 54.24 0 1007067..1009175 + 702 16128915 rlmL b0948 - predicted methyltransferase 885 52.41 0 1009187..1011094 + 635 16128916 uup b0949 - fused predicted transporter subunits of ABC superfamily: ATP-binding components 886 52.23 0 1011224..1012477 + 417 16128917 pqiA b0950 - paraquat-inducible membrane protein A 887 50.21 0 1012482..1014122 + 546 16128918 pqiB b0951 - paraquat-inducible protein B 888 52.13 0 1014119..1014682 + 187 145698237 ymbA b0952 - conserved protein 889 54.17 0 1014938..1015105 + 55 16128920 rmf b0953 - ribosome modulation factor 890 53.18 0 1015175..1015693 - 172 16128921 fabA b0954 - beta-hydroxydecanoyl thioester dehydrase 891 51.79 0 1015762..1017522 - 586 16128922 ycbZ b0955 - predicted peptidase 892 46.14 -1 1017708..1018160 + 150 16128923 ycbG b0956 - conserved protein 893 53.79 0 1018236..1019276 - 346 16128924 ompA b0957 - outer membrane protein A (3a;II*;G;d) 894 48.24 0 1019633..1020142 - 169 16128925 sulA b0958 - SOS cell division inhibitor 895 48.10 0 1020361..1020990 + 209 16128926 sxy b0959 - conserved protein 896 52.23 0 1020953..1023106 - 717 90111194 yccS b0960 - predicted inner membrane protein 897 48.32 0 1023125..1023571 - 148 16128928 yccF b0961 - conserved inner membrane protein 898 53.04 0 1023694..1025748 + 684 16128929 helD b0962 - DNA helicase IV 899 52.72 0 1025780..1026238 - 152 90111195 mgsA b0963 - methylglyoxal synthase 900 50.68 0 1026334..1026996 - 220 16128931 yccT b0964 - conserved protein 901 54.35 0 1027169..1027582 + 137 90111196 yccU b0965 - predicted CoA-binding protein with NAD(P)-binding Rossmann-fold domain 902 55.66 0 1027627..1027944 - 105 145698238 hspQ b0966 - DNA-binding protein, hemimethylated 903 51.81 0 1028002..1029192 - 396 145698239 yccW b0967 - predicted methyltransferase 904 52.33 0 1029287..1029565 + 92 16128935 yccX b0968 - predicted acylphosphatase 905 46.67 0 1029562..1029891 - 109 90111197 yccK b0969 - predicted sulfite reductase subunit 906 51.21 0 1029982..1030641 - 219 16128937 yccA b0970 - inner membrane protein 907 56.12 +1 1031362..1032480 + 372 16128938 hyaA b0972 - hydrogenase 1, small subunit 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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