version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 541 55.02 0 612038..613162 + 374 16128568 fes b0585 - enterobactin/ferric enterobactin esterase 542 55.71 0 613165..613383 + 72 94541099 ybdZ b4511 - conserved protein 543 56.54 +1 613380..617261 + 1293 16128569 entF b0586 - enterobactin synthase multienzyme complex component, ATP-dependent 544 44.97 -1 617477..618610 + 377 16128570 fepE b0587 - regulator of length of O-antigen component of lipopolysaccharide chains 545 53.92 0 618607..619422 - 271 16128571 fepC b0588 - iron-enterobactin transporter subunit 546 58.21 +1 619419..620411 - 330 16128572 fepG b0589 - iron-enterobactin transporter subunit 547 61.00 +2 620408..621412 - 334 16128573 fepD b0590 - iron-enterobactin transporter subunit 548 58.03 +1 621523..622773 + 416 16128574 entS b0591 - predicted transporter 549 55.07 0 622777..623733 - 318 16128575 fepB b0592 - iron-enterobactin transporter subunit 550 56.46 +1 624108..625283 + 391 16128576 entC b0593 - isochorismate synthase 1 551 56.05 +1 625293..626903 + 536 16128577 entE b0594 - 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex 552 55.36 0 626917..627774 + 285 16128578 entB b0595 - isochorismatase 553 57.97 +1 627774..628520 + 248 16128579 entA b0596 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 554 56.76 +1 628523..628936 + 137 16128580 ybdB b0597 - conserved protein 555 57.22 +1 629117..631222 + 701 16128581 cstA b0598 - carbon starvation protein 556 52.02 0 631405..631602 + 65 94541100 ybdD b4512 - conserved protein 557 55.19 0 631612..632700 - 362 16128582 ybdH b0599 - predicted oxidoreductase 558 53.83 0 632809..633969 + 386 16128583 ybdL b0600 - methionine aminotransferase, PLP-dependent 559 46.83 0 633970..634599 - 209 16128584 ybdM b0601 - conserved protein 560 47.58 0 634572..635792 - 406 16128585 ybdN b0602 - conserved protein 561 38.65 -2 635939..636841 - 300 16128586 ybdO b0603 - predicted DNA-binding transcriptional regulator 562 46.85 0 637050..637796 - 248 90111151 dsbG b0604 - periplasmic disulfide isomerase/thiol-disulphide oxidase 563 50.00 0 638168..638731 + 187 16128588 ahpC b0605 - alkyl hydroperoxide reductase, C22 subunit 564 53.13 0 638976..640541 + 521 90111152 ahpF b0606 - alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 565 49.88 0 640662..641090 - 142 16128590 uspG b0607 - universal stress protein UP12 566 50.12 0 641311..642549 + 412 16128591 ybdR b0608 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 567 54.74 0 642780..643190 - 136 16128593 rnk b0610 - regulator of nucleoside diphosphate kinase 568 51.18 0 643420..644226 - 268 16128594 rna b0611 - ribonuclease I 569 50.61 0 644340..645803 - 487 16128595 citT b0612 - citrate:succinate antiporter 570 54.72 0 645854..646732 - 292 16128596 citG b0613 - triphosphoribosyl-dephospho-CoA transferase 571 58.33 +1 646707..647258 - 183 16128597 citX b0614 - apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 572 56.36 +1 647262..648794 - 510 16128598 citF b0615 - citrate lyase, citrate-ACP transferase (alpha) subunit 573 57.54 +1 648805..649713 - 302 90111153 citE b0616 - citrate lyase, citryl-ACP lyase (beta) subunit 574 55.89 0 649710..650006 - 98 16128600 citD b0617 - citrate lyase, acyl carrier (gamma) subunit 575 50.90 0 650021..651079 - 352 90111154 citC b0618 - citrate lyase synthetase 576 50.09 0 651458..653116 + 552 16128602 dpiB b0619 - sensory histidine kinase in two-component regulatory system with citB 577 50.51 0 653085..653765 + 226 16128603 dpiA b0620 - DNA-binding response regulator in two-component regulatory system with citA 578 50.94 0 653806..655191 - 461 16128604 dcuC b0621 - anaerobic C4-dicarboxylate transport 579 46.88 0 655780..656340 + 186 16128605 pagP b0622 - palmitoyl transferase for Lipid A 580 43.81 -1 656515..656724 + 69 16128606 cspE b0623 - DNA-binding transcriptional repressor 581 48.44 0 656778..657161 - 127 16128607 crcB b0624 - predicted inner membrane protein associated with chromosome condensation 582 50.00 0 658170..658373 + 67 16128610 tatE b0627 - TatABCE protein translocation system subunit 583 53.42 0 658474..659439 - 321 16128611 lipA b0628 - lipoate synthase 584 44.86 -1 659648..660601 - 317 90111155 ybeF b0629 - predicted DNA-binding transcriptional regulator 585 47.66 0 660860..661501 - 213 90111156 lipB b0630 - lipoyl-protein ligase 586 46.21 -1 661602..661865 - 87 16128614 ybeD b0631 - conserved protein 587 49.34 0 661975..663186 - 403 16128615 dacA b0632 - D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) 588 57.30 +1 663325..664413 - 362 16128616 rlpA b0633 - minor lipoprotein 589 52.02 0 664424..665536 - 370 16128617 mrdB b0634 - cell wall shape-determining protein 590 52.52 0 665539..667440 - 633 16128618 mrdA b0635 - transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) 591 58.33 +1 667471..667938 - 155 16128619 ybeA b0636 - conserved protein 592 51.26 0 667942..668259 - 105 90111157 ybeB b0637 - predicted protein 593 51.14 0 668519..669130 - 203 16128621 cobC b0638 - predicted alpha-ribazole-5'-P phosphatase 594 50.00 0 669154..669795 - 213 16128622 nadD b0639 - nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent 595 52.33 0 669797..670828 - 343 16128623 holA b0640 - DNA polymerase III, delta subunit 596 52.23 0 670828..671409 - 193 16128624 rlpB b0641 - minor lipoprotein 597 53.35 0 671424..674006 - 860 16128625 leuS b0642 - leucyl-tRNA synthetase 598 52.59 0 674241..674723 + 160 16128626 ybeL b0643 - conserved protein 599 47.03 0 674793..675770 - 325 90111158 ybeQ b0644 - conserved protein 600 45.76 -1 675934..676641 + 235 16128628 ybeR b0645 - predicted protein 601 47.48 0 676638..678065 + 475 16128629 djlB b0646 - predicted chaperone 602 42.70 -1 678075..678629 - 184 16128630 ybeT b0647 - conserved outer membrane protein 603 47.60 0 678731..679438 + 235 16128631 ybeU b0648 - predicted tRNA ligase 604 47.73 0 679435..680886 + 483 16128632 djlC b0649 - Hsc56 co-chaperone of HscC 605 50.03 0 680946..682616 - 556 16128633 hscC b0650 - Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription 606 50.85 0 682700..683635 - 311 16128634 rihA b0651 - ribonucleoside hydrolase 1 607 52.34 0 683753..684478 - 241 16128635 gltL b0652 - glutamate and aspartate transporter subunit 608 50.22 0 684478..685152 - 224 16128636 gltK b0653 - glutamate and aspartate transporter subunit 609 52.50 0 685152..685892 - 246 16128637 gltJ b0654 - glutamate and aspartate transporter subunit 610 48.73 0 686062..686970 - 302 16128638 gltI b0655 - glutamate and aspartate transporter subunit 611 54.67 0 687220..688236 - 338 16128639 insH b0656 - IS5 transposase and trans-activator 612 55.69 0 688566..690104 - 512 16128640 lnt b0657 - apolipoprotein N-acyltransferase 613 51.54 0 690129..691007 - 292 16128641 ybeX b0658 - predicteed ion transport 614 51.71 0 691097..691564 - 155 16128642 ybeY b0659 - conserved protein 615 54.37 0 691561..692601 - 346 145698230 ybeZ b0660 - predicted protein with nucleoside triphosphate hydrolase domain 616 54.18 0 692754..694178 - 474 16128644 miaB b0661 - isopentenyl-adenosine A37 tRNA methylthiolase 617 57.14 +1 694324..695499 + 391 16128645 ubiF b0662 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase 618 52.13 0 696736..698400 - 554 16128650 asnB b0674 - asparagine synthetase B 619 52.99 0 698797..699549 - 250 16128651 nagD b0675 - UMP phosphatase 620 52.99 0 699597..700817 - 406 16128652 nagC b0676 - DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine 621 51.78 0 700826..701974 - 382 16128653 nagA b0677 - N-acetylglucosamine-6-phosphate deacetylase 622 48.81 0 702034..702834 - 266 16128654 nagB b0678 - glucosamine-6-phosphate deaminase 623 54.75 0 703167..705113 + 648 16128655 nagE b0679 - fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components 624 52.49 0 705316..706980 + 554 16128656 glnS b0680 - glutamyl-tRNA synthetase 625 51.24 0 707557..708963 + 468 16128657 ybfM b0681 - predicted outer membrane porin 626 48.01 0 709013..709339 + 108 16128658 ybfN b0682 - predicted lipoprotein 627 47.87 0 709423..709869 - 148 16128659 fur b0683 - DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport 628 40.23 -2 709862..709948 - 28 157783150 uof b4637 - ryhB-regulated fur leader peptide 629 48.96 0 710158..710688 - 176 16128660 fldA b0684 - flavodoxin 1 630 53.74 0 710828..711121 - 97 90111159 ybfE b0685 - lexA-regulated predicted protein 631 50.85 0 711261..712025 - 254 16128662 ybfF b0686 - conserved protein 632 49.63 0 712210..712755 + 181 16128663 seqA b0687 - regulatory protein for replication initiation 633 55.27 0 712781..714421 + 546 16128664 pgm b0688 - phosphoglucomutase 634 45.45 -1 714635..715129 + 164 16128665 ybfP b0689 - predicted protein 635 50.61 0 716169..717488 - 439 16128668 potE b0692 - putrescine/proton symporter: putrescine/ornithine antiporter 636 49.34 0 717485..719683 - 732 16128669 speF b0693 - ornithine decarboxylase isozyme, inducible 637 44.19 -1 719806..720063 + 85 145698231 ybfK b4590 - hypothetical protein 638 56.64 +1 720279..720956 - 225 16128670 kdpE b0694 - DNA-binding response regulator in two-component regulatory system with KdpD 639 57.58 +1 720953..723637 - 894 16128671 kdpD b0695 - fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein 640 53.58 0 723630..724202 - 190 16128672 kdpC b0696 - potassium translocating ATPase, subunit C 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0