version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 494 36.65 -2 563071..563703 - 210 16128519 fimZ b0535 - predicted DNA-binding transcriptional regulator 495 46.91 0 564038..565201 - 387 16128520 intD b0537 - DLP12 prophage; predicted integrase 496 50.16 0 566056..566364 + 102 16128523 insE b0540 - IS3 element protein InsE 497 55.13 0 566361..567227 + 288 16128524 insF b0541 - IS3 element protein InsF 498 41.14 -2 567538..567870 + 110 16128526 emrE b0543 - DLP12 prophage; multidrug resistance protein 499 35.56 -2 568125..569651 + 508 16128527 ybcK b0544 - DLP12 prophage; predicted recombinase 500 42.39 -1 570116..570667 + 183 16128528 ybcL b0545 - DLP12 prophage; predicted kinase inhibitor 501 36.22 -2 570677..571474 + 265 16128529 ybcM b0546 - DLP12 prophage; predicted DNA-binding transcriptional regulator 502 49.02 0 571591..571692 + 33 145698228 ylcH b4588 - hypothetical protein, DLP12 prophage 503 50.44 0 571689..572144 + 151 16128530 ybcN b0547 - DLP12 prophage; predicted protein 504 48.54 0 572144..572314 + 56 16128531 ninE b0548 - DLP12 prophage; conserved protein 505 53.26 0 572307..572597 + 96 16128532 ybcO b0549 - DLP12 prophage; predicted protein 506 53.17 0 572594..572956 + 120 16128533 rusA b0550 - DLP12 prophage; endonuclease RUS 507 47.52 0 572953..573093 + 46 94541097 ylcG b4509 - DLP12 prophage; predicted protein 508 42.97 -1 573179..573562 + 127 16128534 quuD b0551 - DLP12 prophage; predicted antitermination protein 509 54.67 0 573960..574976 - 338 16128535 insH b0552 - IS5 transposase and trans-activator 510 47.69 0 576621..576836 + 71 16128537 essD b0554 - DLP12 prophage; predicted phage lysis protein 511 47.59 0 576836..577333 + 165 16128538 arrD b0555 - DLP12 prophage; predicted lysozyme 512 51.30 0 577330..577791 + 153 16128539 rzpD b0556 - DLP12 prophage; predicted murein endopeptidase 513 56.83 +1 577550..577732 + 60 94541098 rzoD b4510 - DLP12 prophage; predicted lipoprotein 514 41.50 -2 577823..578116 - 97 16128540 borD b0557 - DLP12 prophage; predicted lipoprotein 515 31.63 -2 578407..578817 - 136 90111149 ybcV b0558 - DLP12 prophage; predicted protein 516 39.61 -2 579103..579309 + 68 16128542 ybcW b0559 - DLP12 prophage; predicted protein 517 43.59 -1 579474..579668 - 64 145698229 ylcI b4589 - hypothetical protein 518 52.56 0 580057..580602 + 181 16128543 nohB b0560 - DLP12 prophage; DNA packaging protein 519 31.73 -2 582904..583653 + 249 16128547 appY b0564 - DLP12 prophage; DNA-binding transcriptional activator 520 43.40 -1 583903..584856 - 317 16128548 ompT b0565 - DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) 521 46.33 -1 585370..586131 - 253 16128549 envY b0566 - DNA-binding transcriptional activator of porin biosynthesis 522 52.30 0 586314..587204 - 296 16128550 ybcH b0567 - predicted protein 523 55.06 0 587205..590177 - 990 16128551 nfrA b0568 - bacteriophage N4 receptor, outer membrane subunit 524 52.50 0 590164..592401 - 745 16128552 nfrB b0569 - bacteriophage N4 receptor, inner membrane subunit 525 52.04 0 592551..593993 - 480 16128553 cusS b0570 - sensory histidine kinase in two-component regulatory system with CusR, senses copper ions 526 53.80 0 593983..594666 - 227 16128554 cusR b0571 - DNA-binding response regulator in two-component regulatory system with CusS 527 51.24 0 594823..596196 + 457 16128555 cusC b0572 - copper/silver efflux system, outer membrane component 528 45.35 -1 596354..596686 + 110 16128556 cusF b0573 - periplasmic copper-binding protein 529 55.72 0 596702..597925 + 407 16128557 cusB b0574 - copper/silver efflux system, membrane fusion protein 530 55.69 0 597937..601080 + 1047 16128558 cusA b0575 - copper/silver efflux system, membrane component 531 52.51 0 601182..602558 + 458 16128559 pheP b0576 - phenylalanine transporter 532 47.52 0 602639..603886 - 415 16128560 ybdG b0577 - predicted mechanosensitive channel 533 51.53 0 603994..604647 - 217 16128561 nfsB b0578 - dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive 534 47.15 0 604741..605109 - 122 16128562 ybdF b0579 - conserved protein 535 50.60 0 605174..605422 - 82 16128563 ybdJ b0580 - predicted inner membrane protein 536 51.92 0 605488..606606 - 372 16128564 ybdK b0581 - gamma-glutamyl:cysteine ligase 537 47.71 0 607059..607211 + 50 49176035 hokE b4415 - toxic polypeptide, small 538 51.93 0 607288..608400 + 370 16128565 insL b0582 - IS186/IS421 transposase 539 47.46 0 608682..609311 - 209 16128566 entD b0583 - phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex 540 54.08 0 609477..611717 - 746 16128567 fepA b0584 - iron-enterobactin outer membrane transporter 541 55.02 0 612038..613162 + 374 16128568 fes b0585 - enterobactin/ferric enterobactin esterase 542 55.71 0 613165..613383 + 72 94541099 ybdZ b4511 - conserved protein 543 56.54 +1 613380..617261 + 1293 16128569 entF b0586 - enterobactin synthase multienzyme complex component, ATP-dependent 544 44.97 -1 617477..618610 + 377 16128570 fepE b0587 - regulator of length of O-antigen component of lipopolysaccharide chains 545 53.92 0 618607..619422 - 271 16128571 fepC b0588 - iron-enterobactin transporter subunit 546 58.21 +1 619419..620411 - 330 16128572 fepG b0589 - iron-enterobactin transporter subunit 547 61.00 +2 620408..621412 - 334 16128573 fepD b0590 - iron-enterobactin transporter subunit 548 58.03 +1 621523..622773 + 416 16128574 entS b0591 - predicted transporter 549 55.07 0 622777..623733 - 318 16128575 fepB b0592 - iron-enterobactin transporter subunit 550 56.46 +1 624108..625283 + 391 16128576 entC b0593 - isochorismate synthase 1 551 56.05 +1 625293..626903 + 536 16128577 entE b0594 - 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex 552 55.36 0 626917..627774 + 285 16128578 entB b0595 - isochorismatase 553 57.97 +1 627774..628520 + 248 16128579 entA b0596 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 554 56.76 +1 628523..628936 + 137 16128580 ybdB b0597 - conserved protein 555 57.22 +1 629117..631222 + 701 16128581 cstA b0598 - carbon starvation protein 556 52.02 0 631405..631602 + 65 94541100 ybdD b4512 - conserved protein 557 55.19 0 631612..632700 - 362 16128582 ybdH b0599 - predicted oxidoreductase 558 53.83 0 632809..633969 + 386 16128583 ybdL b0600 - methionine aminotransferase, PLP-dependent 559 46.83 0 633970..634599 - 209 16128584 ybdM b0601 - conserved protein 560 47.58 0 634572..635792 - 406 16128585 ybdN b0602 - conserved protein 561 38.65 -2 635939..636841 - 300 16128586 ybdO b0603 - predicted DNA-binding transcriptional regulator 562 46.85 0 637050..637796 - 248 90111151 dsbG b0604 - periplasmic disulfide isomerase/thiol-disulphide oxidase 563 50.00 0 638168..638731 + 187 16128588 ahpC b0605 - alkyl hydroperoxide reductase, C22 subunit 564 53.13 0 638976..640541 + 521 90111152 ahpF b0606 - alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 565 49.88 0 640662..641090 - 142 16128590 uspG b0607 - universal stress protein UP12 566 50.12 0 641311..642549 + 412 16128591 ybdR b0608 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 567 54.74 0 642780..643190 - 136 16128593 rnk b0610 - regulator of nucleoside diphosphate kinase 568 51.18 0 643420..644226 - 268 16128594 rna b0611 - ribonuclease I 569 50.61 0 644340..645803 - 487 16128595 citT b0612 - citrate:succinate antiporter 570 54.72 0 645854..646732 - 292 16128596 citG b0613 - triphosphoribosyl-dephospho-CoA transferase 571 58.33 +1 646707..647258 - 183 16128597 citX b0614 - apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 572 56.36 +1 647262..648794 - 510 16128598 citF b0615 - citrate lyase, citrate-ACP transferase (alpha) subunit 573 57.54 +1 648805..649713 - 302 90111153 citE b0616 - citrate lyase, citryl-ACP lyase (beta) subunit 574 55.89 0 649710..650006 - 98 16128600 citD b0617 - citrate lyase, acyl carrier (gamma) subunit 575 50.90 0 650021..651079 - 352 90111154 citC b0618 - citrate lyase synthetase 576 50.09 0 651458..653116 + 552 16128602 dpiB b0619 - sensory histidine kinase in two-component regulatory system with citB 577 50.51 0 653085..653765 + 226 16128603 dpiA b0620 - DNA-binding response regulator in two-component regulatory system with citA 578 50.94 0 653806..655191 - 461 16128604 dcuC b0621 - anaerobic C4-dicarboxylate transport 579 46.88 0 655780..656340 + 186 16128605 pagP b0622 - palmitoyl transferase for Lipid A 580 43.81 -1 656515..656724 + 69 16128606 cspE b0623 - DNA-binding transcriptional repressor 581 48.44 0 656778..657161 - 127 16128607 crcB b0624 - predicted inner membrane protein associated with chromosome condensation 582 50.00 0 658170..658373 + 67 16128610 tatE b0627 - TatABCE protein translocation system subunit 583 53.42 0 658474..659439 - 321 16128611 lipA b0628 - lipoate synthase 584 44.86 -1 659648..660601 - 317 90111155 ybeF b0629 - predicted DNA-binding transcriptional regulator 585 47.66 0 660860..661501 - 213 90111156 lipB b0630 - lipoyl-protein ligase 586 46.21 -1 661602..661865 - 87 16128614 ybeD b0631 - conserved protein 587 49.34 0 661975..663186 - 403 16128615 dacA b0632 - D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) 588 57.30 +1 663325..664413 - 362 16128616 rlpA b0633 - minor lipoprotein 589 52.02 0 664424..665536 - 370 16128617 mrdB b0634 - cell wall shape-determining protein 590 52.52 0 665539..667440 - 633 16128618 mrdA b0635 - transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) 591 58.33 +1 667471..667938 - 155 16128619 ybeA b0636 - conserved protein 592 51.26 0 667942..668259 - 105 90111157 ybeB b0637 - predicted protein 593 51.14 0 668519..669130 - 203 16128621 cobC b0638 - predicted alpha-ribazole-5'-P phosphatase 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0