version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 461 57.60 +1 519640..522054 + 804 16128480 ybbP b0496 - predicted inner membrane protein 462 60.13 +1 522485..526765 + 1426 16128481 rhsD b0497 - rhsD element protein 463 30.62 -2 526805..527173 + 122 16128482 ybbC b0498 - predicted protein 464 55.62 0 529356..530450 - 364 16128487 ybbB b0503 - tRNA 2-selenouridine synthase, selenophosphate-dependent 465 52.43 0 530519..531445 - 308 16128488 allS b0504 - DNA-binding transcriptional activator of the allD operon 466 51.14 0 531675..532157 + 160 16128489 allA b0505 - ureidoglycolate hydrolase 467 52.57 0 532235..533050 + 271 16128490 allR b0506 - DNA-binding transcriptional repressor 468 52.92 0 533140..534921 + 593 16128491 gcl b0507 - glyoxylate carboligase 469 44.66 -1 534934..535710 + 258 16128492 hyi b0508 - hydroxypyruvate isomerase 470 50.74 0 535810..536688 + 292 16128493 glxR b0509 - tartronate semialdehyde reductase, NADH-dependent 471 47.01 0 536857..538311 + 484 90111144 ybbW b0511 - predicted allantoin transporter 472 51.62 0 538371..539732 + 453 16128496 allB b0512 - allantoinase 473 51.23 0 539789..541090 + 433 90111145 ybbY b0513 - predicted uracil/xanthine transporter 474 55.58 0 541112..542257 + 381 16128498 glxK b0514 - glycerate kinase II 475 46.18 -1 542485..543270 - 261 16128499 ylbA b0515 - conserved protein 476 51.38 0 543281..544516 - 411 16128500 allC b0516 - allantoate amidohydrolase 477 52.38 0 544538..545587 - 349 16128501 allD b0517 - ureidoglycolate dehydrogenase 478 55.58 0 545904..547571 + 555 16128502 fdrA b0518 - predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain 479 56.86 +1 548850..549665 + 271 16128504 ylbF b0520 - conserved protein 480 56.94 +1 549662..550555 + 297 16128505 ybcF b0521 - predicted carbamate kinase 481 56.46 +1 550750..551817 - 355 16128506 purK b0522 - N5-carboxyaminoimidazole ribonucleotide synthase 482 59.02 +1 551814..552323 - 169 16128507 purE b0523 - N5-carboxyaminoimidazole ribonucleotide mutase 483 54.50 0 552441..553163 - 240 16128508 lpxH b0524 - UDP-2,3-diacylglucosamine pyrophosphatase 484 47.88 0 553166..553660 - 164 16128509 ppiB b0525 - peptidyl-prolyl cis-trans isomerase B (rotamase B) 485 54.47 0 553834..555219 + 461 16128510 cysS b0526 - cysteinyl-tRNA synthetase 486 53.07 0 555255..555776 - 173 16128511 ybcI b0527 - conserved inner membrane protein 487 54.93 0 555884..556096 - 70 90111146 ybcJ b0528 - predicted RNA-binding protein 488 54.33 0 556098..556964 - 288 16128513 folD b0529 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 489 44.57 -1 557435..557977 + 180 90111147 sfmA b0530 - predicted fimbrial-like adhesin protein 490 42.57 -1 558197..558889 + 230 16128515 sfmC b0531 - pilin chaperone, periplasmic 491 47.81 0 558920..561523 + 867 16128516 sfmD b0532 - predicted outer membrane export usher protein 492 45.53 -1 561559..562542 + 327 145698227 sfmH b0533 - predicted fimbrial-like adhesin protein 493 50.00 0 562553..563068 + 171 16128518 sfmF b0534 - predicted fimbrial-like adhesin protein 494 36.65 -2 563071..563703 - 210 16128519 fimZ b0535 - predicted DNA-binding transcriptional regulator 495 46.91 0 564038..565201 - 387 16128520 intD b0537 - DLP12 prophage; predicted integrase 496 50.16 0 566056..566364 + 102 16128523 insE b0540 - IS3 element protein InsE 497 55.13 0 566361..567227 + 288 16128524 insF b0541 - IS3 element protein InsF 498 41.14 -2 567538..567870 + 110 16128526 emrE b0543 - DLP12 prophage; multidrug resistance protein 499 35.56 -2 568125..569651 + 508 16128527 ybcK b0544 - DLP12 prophage; predicted recombinase 500 42.39 -1 570116..570667 + 183 16128528 ybcL b0545 - DLP12 prophage; predicted kinase inhibitor 501 36.22 -2 570677..571474 + 265 16128529 ybcM b0546 - DLP12 prophage; predicted DNA-binding transcriptional regulator 502 49.02 0 571591..571692 + 33 145698228 ylcH b4588 - hypothetical protein, DLP12 prophage 503 50.44 0 571689..572144 + 151 16128530 ybcN b0547 - DLP12 prophage; predicted protein 504 48.54 0 572144..572314 + 56 16128531 ninE b0548 - DLP12 prophage; conserved protein 505 53.26 0 572307..572597 + 96 16128532 ybcO b0549 - DLP12 prophage; predicted protein 506 53.17 0 572594..572956 + 120 16128533 rusA b0550 - DLP12 prophage; endonuclease RUS 507 47.52 0 572953..573093 + 46 94541097 ylcG b4509 - DLP12 prophage; predicted protein 508 42.97 -1 573179..573562 + 127 16128534 quuD b0551 - DLP12 prophage; predicted antitermination protein 509 54.67 0 573960..574976 - 338 16128535 insH b0552 - IS5 transposase and trans-activator 510 47.69 0 576621..576836 + 71 16128537 essD b0554 - DLP12 prophage; predicted phage lysis protein 511 47.59 0 576836..577333 + 165 16128538 arrD b0555 - DLP12 prophage; predicted lysozyme 512 51.30 0 577330..577791 + 153 16128539 rzpD b0556 - DLP12 prophage; predicted murein endopeptidase 513 56.83 +1 577550..577732 + 60 94541098 rzoD b4510 - DLP12 prophage; predicted lipoprotein 514 41.50 -2 577823..578116 - 97 16128540 borD b0557 - DLP12 prophage; predicted lipoprotein 515 31.63 -2 578407..578817 - 136 90111149 ybcV b0558 - DLP12 prophage; predicted protein 516 39.61 -2 579103..579309 + 68 16128542 ybcW b0559 - DLP12 prophage; predicted protein 517 43.59 -1 579474..579668 - 64 145698229 ylcI b4589 - hypothetical protein 518 52.56 0 580057..580602 + 181 16128543 nohB b0560 - DLP12 prophage; DNA packaging protein 519 31.73 -2 582904..583653 + 249 16128547 appY b0564 - DLP12 prophage; DNA-binding transcriptional activator 520 43.40 -1 583903..584856 - 317 16128548 ompT b0565 - DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) 521 46.33 -1 585370..586131 - 253 16128549 envY b0566 - DNA-binding transcriptional activator of porin biosynthesis 522 52.30 0 586314..587204 - 296 16128550 ybcH b0567 - predicted protein 523 55.06 0 587205..590177 - 990 16128551 nfrA b0568 - bacteriophage N4 receptor, outer membrane subunit 524 52.50 0 590164..592401 - 745 16128552 nfrB b0569 - bacteriophage N4 receptor, inner membrane subunit 525 52.04 0 592551..593993 - 480 16128553 cusS b0570 - sensory histidine kinase in two-component regulatory system with CusR, senses copper ions 526 53.80 0 593983..594666 - 227 16128554 cusR b0571 - DNA-binding response regulator in two-component regulatory system with CusS 527 51.24 0 594823..596196 + 457 16128555 cusC b0572 - copper/silver efflux system, outer membrane component 528 45.35 -1 596354..596686 + 110 16128556 cusF b0573 - periplasmic copper-binding protein 529 55.72 0 596702..597925 + 407 16128557 cusB b0574 - copper/silver efflux system, membrane fusion protein 530 55.69 0 597937..601080 + 1047 16128558 cusA b0575 - copper/silver efflux system, membrane component 531 52.51 0 601182..602558 + 458 16128559 pheP b0576 - phenylalanine transporter 532 47.52 0 602639..603886 - 415 16128560 ybdG b0577 - predicted mechanosensitive channel 533 51.53 0 603994..604647 - 217 16128561 nfsB b0578 - dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive 534 47.15 0 604741..605109 - 122 16128562 ybdF b0579 - conserved protein 535 50.60 0 605174..605422 - 82 16128563 ybdJ b0580 - predicted inner membrane protein 536 51.92 0 605488..606606 - 372 16128564 ybdK b0581 - gamma-glutamyl:cysteine ligase 537 47.71 0 607059..607211 + 50 49176035 hokE b4415 - toxic polypeptide, small 538 51.93 0 607288..608400 + 370 16128565 insL b0582 - IS186/IS421 transposase 539 47.46 0 608682..609311 - 209 16128566 entD b0583 - phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex 540 54.08 0 609477..611717 - 746 16128567 fepA b0584 - iron-enterobactin outer membrane transporter 541 55.02 0 612038..613162 + 374 16128568 fes b0585 - enterobactin/ferric enterobactin esterase 542 55.71 0 613165..613383 + 72 94541099 ybdZ b4511 - conserved protein 543 56.54 +1 613380..617261 + 1293 16128569 entF b0586 - enterobactin synthase multienzyme complex component, ATP-dependent 544 44.97 -1 617477..618610 + 377 16128570 fepE b0587 - regulator of length of O-antigen component of lipopolysaccharide chains 545 53.92 0 618607..619422 - 271 16128571 fepC b0588 - iron-enterobactin transporter subunit 546 58.21 +1 619419..620411 - 330 16128572 fepG b0589 - iron-enterobactin transporter subunit 547 61.00 +2 620408..621412 - 334 16128573 fepD b0590 - iron-enterobactin transporter subunit 548 58.03 +1 621523..622773 + 416 16128574 entS b0591 - predicted transporter 549 55.07 0 622777..623733 - 318 16128575 fepB b0592 - iron-enterobactin transporter subunit 550 56.46 +1 624108..625283 + 391 16128576 entC b0593 - isochorismate synthase 1 551 56.05 +1 625293..626903 + 536 16128577 entE b0594 - 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex 552 55.36 0 626917..627774 + 285 16128578 entB b0595 - isochorismatase 553 57.97 +1 627774..628520 + 248 16128579 entA b0596 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 554 56.76 +1 628523..628936 + 137 16128580 ybdB b0597 - conserved protein 555 57.22 +1 629117..631222 + 701 16128581 cstA b0598 - carbon starvation protein 556 52.02 0 631405..631602 + 65 94541100 ybdD b4512 - conserved protein 557 55.19 0 631612..632700 - 362 16128582 ybdH b0599 - predicted oxidoreductase 558 53.83 0 632809..633969 + 386 16128583 ybdL b0600 - methionine aminotransferase, PLP-dependent 559 46.83 0 633970..634599 - 209 16128584 ybdM b0601 - conserved protein 560 47.58 0 634572..635792 - 406 16128585 ybdN b0602 - conserved protein 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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