version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4033 40.81 -2 4523038..4523826 - 262 16132120 yjhI b4299 - KpLE2 phage-like element; predicted DNA-binding transcriptional regulator 4034 49.68 0 4524129..4524911 - 260 16132121 sgcR b4300 - KpLE2 phage-like element; predicted DNA-binding transcriptional regulator 4035 55.45 0 4524928..4525560 - 210 16132122 sgcE b4301 - KpLE2 phage-like element; predicted epimerase 4036 54.40 0 4525572..4526003 - 143 16132123 sgcA b4302 - KpLE2 phage-like element; predicted phosphotransferase enzyme IIA component 4037 53.28 0 4526134..4526940 - 268 16132124 sgcQ b4303 - KpLE2 phage-like element; predicted nucleoside triphosphatase 4038 51.75 0 4526953..4528266 - 437 16132125 sgcC b4304 - KpLE2 phage-like element; predicted phosphotransferase enzyme IIC component 4039 48.39 0 4528278..4528556 - 92 94541133 sgcB b4565 - predicted enzyme IIB component of PTS 4040 52.41 0 4528553..4529674 - 373 90111726 sgcX b4305 - KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain 4041 59.57 +1 4530460..4531206 - 248 16132127 yjhP b4306 - KpLE2 phage-like element; predicted methyltransferase 4042 55.31 0 4531262..4531807 - 181 16132128 yjhQ b4307 - KpLE2 phage-like element; predicted acetyltransferase 4043 49.61 0 4531819..4532076 - 85 94541138 yjhX b4566 - conserved protein 4044 48.73 0 4534637..4535617 - 326 16132130 yjhS b4309 - conserved protein 4045 44.17 -1 4535682..4536788 - 368 90111727 nanM b4310 - conserved protein 4046 42.96 -1 4536808..4537524 - 238 90111728 nanC b4311 - N-acetylnuraminic acid outer membrane channel protein 4047 43.45 -1 4538980..4539582 + 200 16132133 fimB b4312 - tyrosine recombinase/inversion of on/off regulator of fimA 4048 46.90 0 4540060..4540656 + 198 16132134 fimE b4313 - tyrosine recombinase/inversion of on/off regulator of fimA 4049 51.73 0 4541138..4541686 + 182 16132135 fimA b4314 - major type 1 subunit fimbrin (pilin) 4050 49.26 0 4541751..4542290 + 179 90111729 fimI b4315 - fimbrial protein involved in type 1 pilus biosynthesis 4051 44.49 -1 4542327..4543052 + 241 49176488 fimC b4316 - chaperone, periplasmic 4052 48.62 0 4543119..4545755 + 878 16132138 fimD b4317 - outer membrane usher protein, type 1 fimbrial synthesis 4053 49.53 0 4545765..4546295 + 176 16132139 fimF b4318 - minor component of type 1 fimbriae 4054 52.38 0 4546308..4546811 + 167 16132140 fimG b4319 - minor component of type 1 fimbriae 4055 50.17 0 4546831..4547733 + 300 16132141 fimH b4320 - minor component of type 1 fimbriae 4056 53.05 0 4547976..4549319 - 447 16132142 gntP b4321 - fructuronate transporter 4057 54.35 0 4549659..4550843 + 394 16132143 uxuA b4322 - mannonate hydrolase 4058 57.63 +1 4550924..4552384 + 486 16132144 uxuB b4323 - D-mannonate oxidoreductase, NAD-binding 4059 53.62 0 4552599..4553372 + 257 16132145 uxuR b4324 - DNA-binding transcriptional repressor 4060 40.19 -2 4553513..4554343 - 276 49176489 yjiC b4325 - predicted protein 4061 48.85 0 4555016..4555408 + 130 90111730 yjiD b4326 - DNA replication/recombination/repair protein 4062 51.32 0 4555401..4556312 - 303 16132148 yjiE b4327 - predicted DNA-binding transcriptional regulator 4063 56.61 +1 4556377..4557549 - 390 16132149 iadA b4328 - isoaspartyl dipeptidase 4064 53.25 0 4557562..4558023 - 153 16132150 yjiG b4329 - conserved inner membrane protein 4065 53.07 0 4558020..4558703 - 227 90111731 yjiH b4330 - conserved inner membrane protein 4066 50.81 0 4558953..4559507 + 184 90111732 kptA b4331 - 2'-phosphotransferase 4067 53.52 0 4559520..4560698 - 392 16132153 yjiJ b4332 - predicted inner membrane protein 4068 42.62 -1 4560766..4561626 - 286 145698345 yjiK b4333 - conserved protein 4069 56.51 +1 4561945..4562712 - 255 90111734 yjiL b4334 - predicted ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase 4070 53.56 0 4562722..4563873 - 383 90111735 yjiM b4335 - predicted 2-hydroxyglutaryl-CoA dehydratase 4071 52.62 0 4563989..4565269 - 426 16132157 yjiN b4336 - conserved inner membrane protein 4072 53.77 0 4565310..4566542 - 410 16132158 mdtM b4337 - multidrug efflux system protein 4073 55.06 0 4568185..4569597 - 470 16132161 yjiR b4340 - fused predicted DNA-binding transcriptional regulator/predicted aminotransferase 4074 55.76 0 4569774..4569938 + 54 16132162 yjiS b4341 - conserved protein 4075 37.44 -2 4574935..4575981 - 348 16132166 mcrC b4345 - 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC 4076 40.36 -2 4575981..4577360 - 459 90111737 mcrB b4346 - 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB 4077 55.56 0 4577522..4577863 - 113 145698346 symE b4347 - conserved protein 4078 40.43 -2 4578091..4579485 - 464 16132169 hsdS b4348 - specificity determinant for hsdM and hsdR 4079 54.84 0 4579482..4581071 - 529 16132170 hsdM b4349 - DNA methylase M 4080 53.71 0 4581272..4584838 - 1188 16132171 hsdR b4350 - endonuclease R 4081 50.60 0 4584972..4585886 + 304 16132172 mrr b4351 - methylated adenine and cytosine restriction protein 4082 54.65 0 4585932..4586888 - 318 90111738 yjiA b4352 - predicted GTPase 4083 50.49 0 4586899..4587102 - 67 16132174 yjiX b4353 - conserved protein 4084 56.07 +1 4587152..4589302 - 716 90111739 yjiY b4354 - predicted inner membrane protein 4085 54.65 0 4589680..4591335 + 551 16132176 tsr b4355 - methyl-accepting chemotaxis protein I, serine sensor receptor 4086 51.98 0 4591384..4592745 - 453 16132177 yjjL b4356 - predicted transporter 4087 47.43 0 4592960..4593874 - 304 49176497 yjjM b4357 - predicted DNA-binding transcriptional regulator 4088 50.89 0 4594022..4595035 + 337 145698347 yjjN b4358 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 4089 52.01 0 4595173..4597464 - 763 90111741 mdoB b4359 - phosphoglycerol transferase I 4090 50.51 0 4597718..4598212 - 164 90111742 yjjA b4360 - conserved protein 4091 50.54 0 4598261..4598998 - 245 16132182 dnaC b4361 - DNA biosynthesis protein 4092 57.04 +1 4599001..4599540 - 179 16132183 dnaT b4362 - DNA biosynthesis protein (primosomal protein I) 4093 51.05 0 4599647..4600120 - 157 145698348 yjjB b4363 - conserved inner membrane protein 4094 51.62 0 4600111..4600881 - 256 90111743 yjjP b4364 - predicted inner membrane protein 4095 45.04 -1 4601500..4602225 + 241 16132186 yjjQ b4365 - predicted DNA-binding transcriptional regulator 4096 46.40 -1 4602333..4602860 + 175 145698349 bglJ b4366 - DNA-binding transcriptional activator 4097 53.11 0 4602898..4603686 - 262 16132188 fhuF b4367 - ferric iron reductase involved in ferric hydroximate transport 4098 48.10 0 4603827..4604063 + 78 94541134 yjjZ b4567 - predicted protein 4099 55.72 0 4604692..4605723 - 343 16132189 rsmC b4371 - 16S rRNA m2G1207 methylase 4100 57.73 +1 4605826..4606239 + 137 16132190 holD b4372 - DNA polymerase III, psi subunit 4101 52.35 0 4606208..4606654 + 148 16132191 rimI b4373 - acetylase for 30S ribosomal subunit protein S18 4102 53.54 0 4606669..4607346 + 225 16132192 yjjG b4374 - dUMP phosphatase 4103 54.03 0 4607437..4609026 + 529 16132193 prfC b4375 - peptide chain release factor RF-3 4104 51.65 0 4609419..4610024 + 201 16132194 osmY b4376 - periplasmic protein 4105 51.85 0 4610151..4610312 + 53 145698350 ytjA b4568 - predicted protein 4106 53.91 0 4610434..4611507 + 357 16132195 yjjU b4377 - predicted esterase 4107 55.51 0 4611504..4612283 + 259 90111745 yjjV b4378 - predicted DNase 4108 56.37 +1 4612703..4613566 - 287 16132196 yjjW b4379 - predicted pyruvate formate lyase activating enzyme 4109 53.13 0 4613538..4615088 - 516 16132197 yjjI b4380 - conserved protein 4110 55.38 0 4615346..4616125 + 259 16132198 deoC b4381 - 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked 4111 55.18 0 4616252..4617574 + 440 16132199 deoA b4382 - thymidine phosphorylase 4112 54.33 0 4617626..4618849 + 407 16132200 deoB b4383 - phosphopentomutase 4113 52.36 0 4618906..4619625 + 239 16132201 deoD b4384 - purine-nucleoside phosphorylase 4114 53.83 0 4619792..4621123 + 443 16132202 yjjJ b4385 - predicted DNA-binding transcriptional regulator 4115 57.82 +1 4621124..4622140 - 338 16132203 lplA b4386 - lipoate-protein ligase A 4116 55.66 0 4622168..4622812 - 214 16132204 ytjB b4387 - conserved protein 4117 56.66 +1 4622918..4623886 + 322 16132205 serB b4388 - 3-phosphoserine phosphatase 4118 57.70 +1 4623935..4625317 + 460 16132206 radA b4389 - predicted repair protein 4119 50.93 0 4625338..4626570 + 410 90111746 nadR b4390 - bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase 4120 54.74 0 4626878..4628545 - 555 16132208 yjjK b4391 - fused predicted transporter subunits of ABC superfamily: ATP-binding components 4121 54.54 0 4628756..4630693 + 645 90111747 slt b4392 - lytic murein transglycosylase, soluble 4122 54.13 0 4630783..4631109 + 108 16132210 trpR b4393 - DNA-binding transcriptional repressor, tryptophan-binding 4123 56.14 +1 4631256..4631768 - 170 90111748 yjjX b4394 - thiamin metabolism associated protein 4124 56.17 +1 4631820..4632467 + 215 16132212 ytjC b4395 - phosphoglyceromutase 2, co-factor independent 4125 53.22 0 4632464..4633333 - 289 16132213 rob b4396 - DNA-binding transcriptional activator 4126 48.95 0 4633544..4634017 + 157 16132214 creA b4397 - conserved protein 4127 55.22 0 4634030..4634719 + 229 16132215 creB b4398 - DNA-binding response regulator in two-component regulatory system with CreC 4128 53.89 0 4634719..4636143 + 474 16132216 creC b4399 - sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon 4129 49.59 0 4636201..4637553 + 450 16132217 creD b4400 - inner membrane protein 4130 51.05 0 4637613..4638329 - 238 16132218 arcA b4401 - DNA-binding response regulator in two-component regulatory system with ArcB or CpxA 4131 42.55 -1 4638425..4638565 + 46 16132219 yjjY b4402 - predicted protein 4132 49.78 0 4638965..4639651 + 228 16132220 yjtD b4403 - predicted rRNA methyltransferase 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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