IslandPath Analysis: Escherichia coli str. K12 substr. MG1655



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.16   STD DEV: 4.75
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675
4132 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3857	 51.58	0	4323321..4323764	-	147	16131933	yjdN	b4107	-	conserved protein
3858	 46.43	0	4324422..4324757	-	111	16131934	yjdM	b4108	-	conserved protein
3859	 51.46	0	4325158..4327386	+	742	16131935	yjdA	b4109	-	conserved protein with nucleoside triphosphate hydrolase domain
3860	 56.88	+1	4327383..4328261	+	292	90111687	yjcZ	b4110	-	conserved protein
3861	 50.43	0	4328525..4330027	+	500	16131937	proP	b4111	-	proline/glycine betaine transporter
3862	 54.21	0	4330204..4331295	-	363	16131938	basS	b4112	-	sensory histidine kinase in two-component regulatory system with BasR
3863	 53.21	0	4331305..4331973	-	222	16131939	basR	b4113	-	DNA-binding response regulator in two-component regulatory system with BasS
3864	 49.45	0	4331970..4333613	-	547	90111688	eptA	b4114	-	predicted metal dependent hydrolase
3865	 53.74	0	4333717..4335054	-	445	16131941	adiC	b4115	-	arginine:agmatin
3866	 41.34	-2	4335191..4335952	-	253	16131942	adiY	b4116	-	DNA-binding transcriptional activator
3867	 52.66	0	4336277..4338547	-	756	16131943	adiA	b4117	-	biodegradative arginine decarboxylase
3868	 50.28	0	4338743..4339651	-	302	16131944	melR	b4118	-	DNA-binding transcriptional dual regulator
3869	 52.43	0	4339934..4341289	+	451	16131945	melA	b4119	-	alpha-galactosidase, NAD(P)-binding
3870	 45.96	-1	4341404..4342813	+	469	16131946	melB	b4120	-	melibiose:sodium symporter
3871	 54.92	0	4342952..4343581	-	209	16131947	yjdF	b4121	-	conserved inner membrane protein
3872	 54.64	0	4343703..4345349	-	548	16131948	fumB	b4122	-	anaerobic class I fumarate hydratase (fumarase B)
3873	 52.27	0	4345427..4346767	-	446	16131949	dcuB	b4123	-	C4-dicarboxylate antiporter
3874	 49.31	0	4347338..4348057	-	239	16131950	dcuR	b4124	-	DNA-binding response regulator in two-component regulatory system with DcuS
3875	 49.94	0	4348054..4349685	-	543	16131951	dcuS	b4125	-	sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration
3876	 48.92	0	4349866..4350096	+	76	16131952	yjdI	b4126	-	conserved protein
3877	 41.03	-2	4350108..4350380	+	90	16131953	yjdJ	b4127	-	predicted acyltransferase with acyl-CoA N-acyltransferase domain
3878	 35.02	-2	4350607..4350903	+	98	16131954	yjdK	b4128	-	predicted protein
3879	 35.06	-2	4350931..4351104	+	57	94541131	yjdO	b4559	-	predicted protein
3880	 47.43	0	4351223..4352740	-	505	16131955	lysU	b4129	-	lysine tRNA synthetase, inducible
3881	 51.10	0	4352977..4354434	-	485	16131956	yjdL	b4130	-	predicted transporter
3882	 47.58	0	4354493..4356640	-	715	16131957	cadA	b4131	-	lysine decarboxylase 1
3883	 49.44	0	4356720..4358054	-	444	16131958	cadB	b4132	-	predicted lysine/cadaverine transporter
3884	 41.98	-1	4358419..4359957	-	512	16131959	cadC	b4133	-	DNA-binding transcriptional activator
3885	 53.12	0	4360756..4361331	-	191	90111689	yjdC	b4135	-	predicted transcriptional regulator
3886	 54.42	0	4361368..4363065	-	565	16131961	dipZ	b4136	-	fused thiol:disulfide interchange protein: activator of DsbC/conserved protein
3887	 50.15	0	4363041..4363379	-	112	16131962	cutA	b4137	-	copper binding protein, copper sensitivity
3888	 52.61	0	4363495..4364796	-	433	16131963	dcuA	b4138	-	C4-dicarboxylate antiporter
3889	 49.20	0	4364914..4366350	-	478	90111690	aspA	b4139	-	aspartate ammonia-lyase
3890	 47.38	0	4366687..4367163	+	158	90111691	fxsA	b4140	-	inner membrane protein
3891	 52.27	0	4367179..4368435	-	418	16131966	yjeH	b4141	-	predicted transporter
3892	 48.64	0	4368711..4369004	+	97	16131967	groS	b4142	-	Cpn10 chaperonin GroES, small subunit of GroESL
3893	 52.88	0	4369048..4370694	+	548	16131968	groL	b4143	-	Cpn60 chaperonin GroEL, large subunit of GroESL
3894	 55.37	0	4370832..4371185	+	117	90111692	yjeI	b4144	-	conserved protein
3895	 45.17	-1	4371388..4372257	-	289	16131970	yjeJ	b4145	-	predicted protein
3896	 52.67	0	4372652..4373680	-	342	16131971	yjeK	b4146	-	predicted lysine aminomutase
3897	 49.38	0	4373722..4374288	+	188	16131972	efp	b4147	-	Elongation factor EF-P
3898	 53.97	0	4374340..4374465	+	41	49176462	ecnA	b4410	-	entericidin A membrane lipoprotein, antidote entericidin B
3899	 48.30	0	4374576..4374722	+	48	49176463	ecnB	b4411	-	entericidin B membrane lipoprotein
3900	 53.14	0	4374898..4375215	+	105	90111693	sugE	b4148	-	multidrug efflux system protein
3901	 53.37	0	4375212..4375745	-	177	16131974	blc	b4149	-	outer membrane lipoprotein (lipocalin)
3902	 50.18	0	4375834..4376967	-	377	16131975	ampC	b4150	-	beta-lactamase/D-alanine carboxypeptidase
3903	 54.44	0	4377030..4377389	-	119	16131976	frdD	b4151	-	fumarate reductase (anaerobic), membrane anchor subunit
3904	 49.24	0	4377400..4377795	-	131	16131977	frdC	b4152	-	fumarate reductase (anaerobic), membrane anchor subunit
3905	 53.61	0	4377806..4378540	-	244	16131978	frdB	b4153	-	fumarate reductase (anaerobic), Fe-S subunit
3906	 56.38	+1	4378533..4380341	-	602	16131979	frdA	b4154	-	fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit
3907	 52.66	0	4380666..4381643	+	325	90111694	poxA	b4155	-	predicted lysyl-tRNA synthetase
3908	 47.11	0	4381862..4383364	+	500	90111695	yjeM	b4156	-	predicted transporter
3909	 50.16	0	4383416..4383730	+	104	16131982	yjeN	b4157	-	predicted protein
3910	 47.94	0	4383727..4384041	+	104	16131983	yjeO	b4158	-	conserved inner membrane protein
3911	 55.75	0	4384070..4387393	-	1107	16131984	yjeP	b4159	-	predicted mechanosensitive channel
3912	 53.46	0	4387415..4388383	-	322	16131985	psd	b4160	-	phosphatidylserine decarboxylase
3913	 53.94	0	4388480..4389532	-	350	90111696	rsgA	b4161	-	ribosome small subunit-dependent GTPase A
3914	 54.03	0	4389627..4390172	+	181	90111697	orn	b4162	-	oligoribonuclease
3915	 52.63	0	4390951..4392090	-	379	16131988	yjeS	b4166	-	predicted Fe-S electron transport protein
3916	 57.11	+1	4392089..4393636	+	515	16131989	yjeF	b4167	-	predicted carbohydrate kinase
3917	 52.38	0	4393608..4394069	+	153	16131990	yjeE	b4168	-	ATPase with strong ADP affinity
3918	 55.08	0	4394088..4395425	+	445	16131991	amiB	b4169	-	N-acetylmuramoyl-l-alanine amidase II
3919	 56.28	+1	4395435..4397282	+	615	16131992	mutL	b4170	-	methyl-directed mismatch repair protein
3920	 53.42	0	4397275..4398225	+	316	16131993	miaA	b4171	-	delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase
3921	 48.87	0	4398311..4398619	+	102	16131994	hfq	b4172	-	HF-I, host factor for RNA phage Q beta replication
3922	 53.86	0	4398695..4399975	+	426	16131995	hflX	b4173	-	predicted GTPase
3923	 56.19	+1	4400061..4401320	+	419	16131996	hflK	b4174	-	modulator for HflB protease specific for phage lambda cII repressor
3924	 53.03	0	4401323..4402327	+	334	16131997	hflC	b4175	-	modulator for HflB protease specific for phage lambda cII repressor
3925	 48.99	0	4402409..4402606	+	65	16131998	yjeT	b4176	-	conserved inner membrane protein
3926	 53.89	0	4402710..4404008	+	432	16131999	purA	b4177	-	adenylosuccinate synthetase
3927	 48.36	0	4404213..4404638	+	141	16132000	nsrR	b4178	-	predicted DNA-binding transcriptional regulator
3928	 55.28	0	4404677..4407118	+	813	90111698	rnr	b4179	-	exoribonuclease R, RNase R
3929	 56.28	+1	4407298..4408029	+	243	16132002	rlmB	b4180	-	23S rRNA (Gm2251)-methyltransferase
3930	 38.56	-2	4408156..4408557	+	133	16132003	yjfI	b4181	-	conserved protein
3931	 51.36	0	4408576..4409274	+	232	16132004	yjfJ	b4182	-	predicted transcriptional regulator effector protein
3932	 47.42	0	4409325..4409984	+	219	16132005	yjfK	b4183	-	conserved protein
3933	 43.61	-1	4410002..4410400	+	132	16132006	yjfL	b4184	-	conserved inner membrane protein
3934	 48.98	0	4410410..4411048	+	212	16132007	yjfM	b4185	-	conserved protein
3935	 52.92	0	4411051..4412214	+	387	16132008	yjfC	b4186	-	predicted synthetase/amidase
3936	 54.31	0	4412298..4413923	+	541	162135915	aidB	b4187	-	isovaleryl CoA dehydrogenase
3937	 51.09	0	4414040..4414315	-	91	90111700	yjfN	b4188	-	predicted protein
3938	 48.79	0	4414464..4414793	-	109	90111701	yjfO	b4189	-	conserved protein
3939	 53.20	0	4414975..4415724	+	249	16132012	yjfP	b4190	-	predicted hydrolase
3940	 50.66	0	4415721..4416476	-	251	16132013	ulaR	b4191	-	DNA-binding transcriptional dual regulator
3941	 52.21	0	4416584..4417648	-	354	90111702	ulaG	b4192	-	predicted L-ascorbate 6-phosphate lactonase
3942	 53.08	0	4418003..4419400	+	465	90111703	ulaA	b4193	-	L-ascorbate-specific enzyme IIC component of PTS
3943	 50.65	0	4419416..4419721	+	101	16132016	ulaB	b4194	-	L-ascorbate-specific enzyme IIB component of PTS
3944	 53.98	0	4419731..4420195	+	154	16132017	ulaC	b4195	-	L-ascorbate-specific enzyme IIA component of PTS
3945	 57.14	+1	4420209..4420859	+	216	16132018	ulaD	b4196	-	3-keto-L-gulonate 6-phosphate decarboxylase
3946	 56.73	+1	4420869..4421723	+	284	16132019	ulaE	b4197	-	L-xylulose 5-phosphate 3