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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3854 61.85 +2 4319720..4320445 - 241 16131928 phnF b4102 - predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation 3855 55.46 0 4321359..4322375 - 338 16131931 phnD b4105 - phosphonate/organophosphate ester transporter subunit 3856 58.56 +1 4322400..4323188 - 262 16131932 phnC b4106 - phosphonate/organophosphate ester transporter subunit 3857 51.58 0 4323321..4323764 - 147 16131933 yjdN b4107 - conserved protein 3858 46.43 0 4324422..4324757 - 111 16131934 yjdM b4108 - conserved protein 3859 51.46 0 4325158..4327386 + 742 16131935 yjdA b4109 - conserved protein with nucleoside triphosphate hydrolase domain 3860 56.88 +1 4327383..4328261 + 292 90111687 yjcZ b4110 - conserved protein 3861 50.43 0 4328525..4330027 + 500 16131937 proP b4111 - proline/glycine betaine transporter 3862 54.21 0 4330204..4331295 - 363 16131938 basS b4112 - sensory histidine kinase in two-component regulatory system with BasR 3863 53.21 0 4331305..4331973 - 222 16131939 basR b4113 - DNA-binding response regulator in two-component regulatory system with BasS 3864 49.45 0 4331970..4333613 - 547 90111688 eptA b4114 - predicted metal dependent hydrolase 3865 53.74 0 4333717..4335054 - 445 16131941 adiC b4115 - arginine:agmatin 3866 41.34 -2 4335191..4335952 - 253 16131942 adiY b4116 - DNA-binding transcriptional activator 3867 52.66 0 4336277..4338547 - 756 16131943 adiA b4117 - biodegradative arginine decarboxylase 3868 50.28 0 4338743..4339651 - 302 16131944 melR b4118 - DNA-binding transcriptional dual regulator 3869 52.43 0 4339934..4341289 + 451 16131945 melA b4119 - alpha-galactosidase, NAD(P)-binding 3870 45.96 -1 4341404..4342813 + 469 16131946 melB b4120 - melibiose:sodium symporter 3871 54.92 0 4342952..4343581 - 209 16131947 yjdF b4121 - conserved inner membrane protein 3872 54.64 0 4343703..4345349 - 548 16131948 fumB b4122 - anaerobic class I fumarate hydratase (fumarase B) 3873 52.27 0 4345427..4346767 - 446 16131949 dcuB b4123 - C4-dicarboxylate antiporter 3874 49.31 0 4347338..4348057 - 239 16131950 dcuR b4124 - DNA-binding response regulator in two-component regulatory system with DcuS 3875 49.94 0 4348054..4349685 - 543 16131951 dcuS b4125 - sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration 3876 48.92 0 4349866..4350096 + 76 16131952 yjdI b4126 - conserved protein 3877 41.03 -2 4350108..4350380 + 90 16131953 yjdJ b4127 - predicted acyltransferase with acyl-CoA N-acyltransferase domain 3878 35.02 -2 4350607..4350903 + 98 16131954 yjdK b4128 - predicted protein 3879 35.06 -2 4350931..4351104 + 57 94541131 yjdO b4559 - predicted protein 3880 47.43 0 4351223..4352740 - 505 16131955 lysU b4129 - lysine tRNA synthetase, inducible 3881 51.10 0 4352977..4354434 - 485 16131956 yjdL b4130 - predicted transporter 3882 47.58 0 4354493..4356640 - 715 16131957 cadA b4131 - lysine decarboxylase 1 3883 49.44 0 4356720..4358054 - 444 16131958 cadB b4132 - predicted lysine/cadaverine transporter 3884 41.98 -1 4358419..4359957 - 512 16131959 cadC b4133 - DNA-binding transcriptional activator 3885 53.12 0 4360756..4361331 - 191 90111689 yjdC b4135 - predicted transcriptional regulator 3886 54.42 0 4361368..4363065 - 565 16131961 dipZ b4136 - fused thiol:disulfide interchange protein: activator of DsbC/conserved protein 3887 50.15 0 4363041..4363379 - 112 16131962 cutA b4137 - copper binding protein, copper sensitivity 3888 52.61 0 4363495..4364796 - 433 16131963 dcuA b4138 - C4-dicarboxylate antiporter 3889 49.20 0 4364914..4366350 - 478 90111690 aspA b4139 - aspartate ammonia-lyase 3890 47.38 0 4366687..4367163 + 158 90111691 fxsA b4140 - inner membrane protein 3891 52.27 0 4367179..4368435 - 418 16131966 yjeH b4141 - predicted transporter 3892 48.64 0 4368711..4369004 + 97 16131967 groS b4142 - Cpn10 chaperonin GroES, small subunit of GroESL 3893 52.88 0 4369048..4370694 + 548 16131968 groL b4143 - Cpn60 chaperonin GroEL, large subunit of GroESL 3894 55.37 0 4370832..4371185 + 117 90111692 yjeI b4144 - conserved protein 3895 45.17 -1 4371388..4372257 - 289 16131970 yjeJ b4145 - predicted protein 3896 52.67 0 4372652..4373680 - 342 16131971 yjeK b4146 - predicted lysine aminomutase 3897 49.38 0 4373722..4374288 + 188 16131972 efp b4147 - Elongation factor EF-P 3898 53.97 0 4374340..4374465 + 41 49176462 ecnA b4410 - entericidin A membrane lipoprotein, antidote entericidin B 3899 48.30 0 4374576..4374722 + 48 49176463 ecnB b4411 - entericidin B membrane lipoprotein 3900 53.14 0 4374898..4375215 + 105 90111693 sugE b4148 - multidrug efflux system protein 3901 53.37 0 4375212..4375745 - 177 16131974 blc b4149 - outer membrane lipoprotein (lipocalin) 3902 50.18 0 4375834..4376967 - 377 16131975 ampC b4150 - beta-lactamase/D-alanine carboxypeptidase 3903 54.44 0 4377030..4377389 - 119 16131976 frdD b4151 - fumarate reductase (anaerobic), membrane anchor subunit 3904 49.24 0 4377400..4377795 - 131 16131977 frdC b4152 - fumarate reductase (anaerobic), membrane anchor subunit 3905 53.61 0 4377806..4378540 - 244 16131978 frdB b4153 - fumarate reductase (anaerobic), Fe-S subunit 3906 56.38 +1 4378533..4380341 - 602 16131979 frdA b4154 - fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit 3907 52.66 0 4380666..4381643 + 325 90111694 poxA b4155 - predicted lysyl-tRNA synthetase 3908 47.11 0 4381862..4383364 + 500 90111695 yjeM b4156 - predicted transporter 3909 50.16 0 4383416..4383730 + 104 16131982 yjeN b4157 - predicted protein 3910 47.94 0 4383727..4384041 + 104 16131983 yjeO b4158 - conserved inner membrane protein 3911 55.75 0 4384070..4387393 - 1107 16131984 yjeP b4159 - predicted mechanosensitive channel 3912 53.46 0 4387415..4388383 - 322 16131985 psd b4160 - phosphatidylserine decarboxylase 3913 53.94 0 4388480..4389532 - 350 90111696 rsgA b4161 - ribosome small subunit-dependent GTPase A 3914 54.03 0 4389627..4390172 + 181 90111697 orn b4162 - oligoribonuclease 3915 52.63 0 4390951..4392090 - 379 16131988 yjeS b4166 - predicted Fe-S electron transport protein 3916 57.11 +1 4392089..4393636 + 515 16131989 yjeF b4167 - predicted carbohydrate kinase 3917 52.38 0 4393608..4394069 + 153 16131990 yjeE b4168 - ATPase with strong ADP affinity 3918 55.08 0 4394088..4395425 + 445 16131991 amiB b4169 - N-acetylmuramoyl-l-alanine amidase II 3919 56.28 +1 4395435..4397282 + 615 16131992 mutL b4170 - methyl-directed mismatch repair protein 3920 53.42 0 4397275..4398225 + 316 16131993 miaA b4171 - delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 3921 48.87 0 4398311..4398619 + 102 16131994 hfq b4172 - HF-I, host factor for RNA phage Q beta replication 3922 53.86 0 4398695..4399975 + 426 16131995 hflX b4173 - predicted GTPase 3923 56.19 +1 4400061..4401320 + 419 16131996 hflK b4174 - modulator for HflB protease specific for phage lambda cII repressor 3924 53.03 0 4401323..4402327 + 334 16131997 hflC b4175 - modulator for HflB protease specific for phage lambda cII repressor 3925 48.99 0 4402409..4402606 + 65 16131998 yjeT b4176 - conserved inner membrane protein 3926 53.89 0 4402710..4404008 + 432 16131999 purA b4177 - adenylosuccinate synthetase 3927 48.36 0 4404213..4404638 + 141 16132000 nsrR b4178 - predicted DNA-binding transcriptional regulator 3928 55.28 0 4404677..4407118 + 813 90111698 rnr b4179 - exoribonuclease R, RNase R 3929 56.28 +1 4407298..4408029 + 243 16132002 rlmB b4180 - 23S rRNA (Gm2251)-methyltransferase 3930 38.56 -2 4408156..4408557 + 133 16132003 yjfI b4181 - conserved protein 3931 51.36 0 4408576..4409274 + 232 16132004 yjfJ b4182 - predicted transcriptional regulator effector protein 3932 47.42 0 4409325..4409984 + 219 16132005 yjfK b4183 - conserved protein 3933 43.61 -1 4410002..4410400 + 132 16132006 yjfL b4184 - conserved inner membrane protein 3934 48.98 0 4410410..4411048 + 212 16132007 yjfM b4185 - conserved protein 3935 52.92 0 4411051..4412214 + 387 16132008 yjfC b4186 - predicted synthetase/amidase 3936 54.31 0 4412298..4413923 + 541 162135915 aidB b4187 - isovaleryl CoA dehydrogenase 3937 51.09 0 4414040..4414315 - 91 90111700 yjfN b4188 - predicted protein 3938 48.79 0 4414464..4414793 - 109 90111701 yjfO b4189 - conserved protein 3939 53.20 0 4414975..4415724 + 249 16132012 yjfP b4190 - predicted hydrolase 3940 50.66 0 4415721..4416476 - 251 16132013 ulaR b4191 - DNA-binding transcriptional dual regulator 3941 52.21 0 4416584..4417648 - 354 90111702 ulaG b4192 - predicted L-ascorbate 6-phosphate lactonase 3942 53.08 0 4418003..4419400 + 465 90111703 ulaA b4193 - L-ascorbate-specific enzyme IIC component of PTS 3943 50.65 0 4419416..4419721 + 101 16132016 ulaB b4194 - L-ascorbate-specific enzyme IIB component of PTS 3944 53.98 0 4419731..4420195 + 154 16132017 ulaC b4195 - L-ascorbate-specific enzyme IIA component of PTS 3945 57.14 +1 4420209..4420859 + 216 16132018 ulaD b4196 - 3-keto-L-gulonate 6-phosphate decarboxylase 3946 56.73 +1 4420869..4421723 + 284 16132019 ulaE b4197 - L-xylulose 5-phosphate 3-epimerase 3947 57.21 +1 4421723..4422409 + 228 16132020 ulaF b4198 - L-ribulose 5-phosphate 4-epimerase 3948 46.01 -1 4422539..4422814 - 91 16132021 yjfY b4199 - predicted protein 3949 52.53 0 4423141..4423536 + 131 16132022 rpsF b4200 - 30S ribosomal subunit protein S6 3950 52.38 0 4423543..4423857 + 104 16132023 priB b4201 - primosomal protein N 3951 52.63 0 4423862..4424089 + 75 16132024 rpsR b4202 - 30S ribosomal subunit protein S18 3952 49.78 0 4424131..4424580 + 149 16132025 rplI b4203 - 50S ribosomal subunit protein L9 3953 42.39 -1 4424651..4425445 - 264 16132026 yjfZ b4204 - predicted protein 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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