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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3732 44.06 -1 4172099..4173049 - 316 16131808 coaA b3974 - pantothenate kinase 3733 53.42 0 4173967..4175151 + 394 16131810 tufB b3980 - protein chain elongation factor EF-Tu (duplicate of tufA) 3734 54.95 0 4175381..4175764 + 127 16131811 secE b3981 - preprotein translocase membrane subunit 3735 51.65 0 4175766..4176311 + 181 16131812 nusG b3982 - transcription termination factor 3736 52.21 0 4176470..4176898 + 142 16131813 rplK b3983 - 50S ribosomal subunit protein L11 3737 51.63 0 4176902..4177606 + 234 16131814 rplA b3984 - 50S ribosomal subunit protein L1 3738 52.41 0 4178019..4178516 + 165 16131815 rplJ b3985 - 50S ribosomal subunit protein L10 3739 46.17 -1 4178583..4178948 + 121 16131816 rplL b3986 - 50S ribosomal subunit protein L7/L12 3740 52.62 0 4179268..4183296 + 1342 16131817 rpoB b3987 - RNA polymerase, beta subunit 3741 53.84 0 4183373..4187596 + 1407 16131818 rpoC b3988 - RNA polymerase, beta prime subunit 3742 42.41 -1 4187809..4188348 + 179 16131819 yjaZ b3989 - heat shock protein 3743 55.03 0 4188758..4189891 - 377 16131820 thiH b3990 - thiamin biosynthesis ThiGH complex subunit 3744 58.50 +1 4189888..4190658 - 256 33347812 thiG b3991 - thiamin biosynthesis ThiGH complex subunit 3745 55.72 0 4190660..4190860 - 66 49176448 thiS b4407 - sulphur carrier protein 3746 57.54 +1 4190844..4191599 - 251 90111672 thiF b3992 - thiamin (thiazole moiety) biosynthesis protein 3747 58.02 +1 4191592..4192227 - 211 16131823 thiE b3993 - thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) 3748 55.75 0 4192227..4194122 - 631 16131824 thiC b3994 - thiamin (pyrimidine moiety) biosynthesis protein 3749 49.06 0 4194355..4194831 - 158 16131825 rsd b3995 - stationary phase protein, binds sigma 70 RNA polymerase subunit 3750 53.23 0 4194926..4195699 + 257 49176450 nudC b3996 - NADH pyrophosphatase 3751 56.06 +1 4195739..4196803 + 354 16131827 hemE b3997 - uroporphyrinogen decarboxylase 3752 58.78 +1 4196813..4197484 + 223 90111673 nfi b3998 - endonuclease V 3753 48.56 0 4197527..4198117 + 196 16131829 yjaG b3999 - conserved protein 3754 48.35 0 4198304..4198576 + 90 16131830 hupA b4000 - HU, DNA-binding transcriptional regulator, alpha subunit 3755 53.45 0 4198589..4199284 + 231 16131831 yjaH b4001 - conserved protein 3756 53.52 0 4199286..4199711 - 141 90111674 zraP b4002 - Zn-binding periplasmic protein 3757 54.29 0 4199949..4201346 + 465 16131833 zraS b4003 - sensory histidine kinase in two-component regulatory system with ZraR 3758 56.26 +1 4201343..4202668 + 441 16131834 zraR b4004 - fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein 3759 58.22 +1 4202665..4203954 - 429 16131835 purD b4005 - phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 3760 56.29 +1 4203966..4205555 - 529 16131836 purH b4006 - fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase 3761 45.31 -1 4211257..4211640 + 127 16131837 yjaA b4011 - conserved protein 3762 54.50 0 4211703..4212146 - 147 16131838 yjaB b4012 - predicted acetyltransferase 3763 50.00 0 4212303..4213232 + 309 16131839 metA b4013 - homoserine O-transsuccinylase 3764 51.75 0 4213501..4215102 + 533 16131840 aceB b4014 - malate synthase A 3765 55.33 0 4215132..4216436 + 434 16131841 aceA b4015 - isocitrate lyase 3766 52.79 0 4216619..4218355 + 578 16131842 aceK b4016 - isocitrate dehydrogenase kinase/phosphatase 3767 37.63 -2 4218324..4220510 - 728 16131843 arpA b4017 - ankyrin repeat protein, function unknown 3768 54.18 0 4220827..4221651 - 274 90111675 iclR b4018 - DNA-binding transcriptional repressor 3769 55.84 0 4221851..4225534 + 1227 16131845 metH b4019 - homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 3770 55.33 0 4225754..4227385 + 543 16131846 yjbB b4020 - predicted transporter 3771 54.35 0 4227476..4228165 - 229 16131847 pepE b4021 - (alpha)-aspartyl dipeptidase 3772 51.55 0 4228377..4229249 + 290 16131848 rluF b4022 - 23S rRNA pseudouridine synthase 3773 49.45 0 4229382..4229654 - 90 16131849 pagB b4023 - conserved protein 3774 53.85 0 4229907..4231256 - 449 16131850 lysC b4024 - aspartokinase III 3775 51.33 0 4231781..4233430 + 549 16131851 pgi b4025 - glucosephosphate isomerase 3776 60.49 +1 4233929..4234171 + 80 16131852 yjbE b4026 - predicted protein 3777 54.77 0 4234285..4234923 + 212 90111676 yjbF b4027 - predicted lipoprotein 3778 58.67 +1 4234920..4235657 + 245 16131854 yjbG b4028 - conserved protein 3779 54.03 0 4235657..4237753 + 698 16131855 yjbH b4029 - predicted porin 3780 49.10 0 4237800..4238078 - 92 145698339 yjbT b4620 - hypothetical protein, no homologs 3781 49.15 0 4238348..4238758 + 136 16131856 psiE b4030 - predicted phosphate starvation inducible protein 3782 49.59 0 4238802..4240277 - 491 16131857 xylE b4031 - D-xylose transporter 3783 54.55 0 4240649..4241539 - 296 16131858 malG b4032 - maltose transporter subunit 3784 53.27 0 4241554..4243098 - 514 16131859 malF b4033 - maltose transporter subunit 3785 51.05 0 4243252..4244442 - 396 16131860 malE b4034 - maltose transporter subunit 3786 54.84 0 4244807..4245922 + 371 16131861 malK b4035 - fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein 3787 51.68 0 4245994..4247334 + 446 16131862 lamB b4036 - maltose outer membrane porin (maltoporin) 3788 53.42 0 4247577..4248497 + 306 16131863 malM b4037 - maltose regulon periplasmic protein 3789 52.81 0 4250529..4251026 + 165 90111677 ubiC b4039 - chorismate pyruvate lyase 3790 51.78 0 4251039..4251911 + 290 16131866 ubiA b4040 - p-hydroxybenzoate octaprenyltransferase 3791 55.16 0 4252066..4254489 - 807 90111678 plsB b4041 - glycerol-3-phosphate O-acyltransferase 3792 51.76 0 4254660..4255028 + 122 16131868 dgkA b4042 - diacylglycerol kinase 3793 51.89 0 4255138..4255746 + 202 16131869 lexA b4043 - DNA-binding transcriptional repressor of SOS regulon 3794 55.72 0 4255765..4257144 + 459 162135919 dinF b4044 - DNA-damage-inducible SOS response protein 3795 42.38 -1 4257260..4257469 + 69 16131871 yjbJ b4045 - predicted stress response protein 3796 52.13 0 4257511..4258026 - 171 90111679 zur b4046 - DNA-binding transcriptional repressor, Zn(II)-binding 3797 28.63 -2 4258344..4258598 + 84 16131873 yjbL b4047 - predicted protein 3798 36.58 -2 4258622..4259329 + 235 16131874 yjbM b4048 - predicted protein 3799 54.28 0 4259737..4260729 + 330 145698340 dusA b4049 - tRNA-dihydrouridine synthase A 3800 49.79 0 4260863..4261105 + 80 90111680 pspG b4050 - phage shock protein G 3801 53.05 0 4261271..4262254 - 327 16131877 qor b4051 - quinone oxidoreductase, NADPH-dependent 3802 53.81 0 4262337..4263752 + 471 16131878 dnaB b4052 - replicative DNA helicase 3803 55.93 +1 4263805..4264884 + 359 16131879 alr b4053 - alanine racemase 1, PLP-binding, biosynthetic 3804 52.76 0 4265137..4266330 + 397 16131880 tyrB b4054 - tyrosine aminotransferase, tyrosine-repressible, PLP-dependent 3805 28.43 -2 4266832..4267035 - 67 145698341 yjbS b4621 - hypothetical protein 3806 49.44 0 4267437..4268150 + 237 16131881 aphA b4055 - acid phosphatase/phosphotransferase, class B, non-specific 3807 51.80 0 4268261..4268677 + 138 16131882 yjbQ b4056 - conserved protein 3808 50.42 0 4268681..4269037 + 118 16131883 yjbR b4057 - conserved protein 3809 56.08 +1 4269072..4271894 - 940 16131884 uvrA b4058 - ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC 3810 58.10 +1 4272148..4272684 + 178 16131885 ssb b4059 - single-stranded DNA-binding protein 3811 52.48 0 4272783..4273064 - 93 90111681 yjcB b4060 - predicted inner membrane protein 3812 44.74 -1 4273494..4275080 + 528 16131887 yjcC b4061 - predicted signal transduction protein (EAL domain containing protein) 3813 50.93 0 4275083..4275406 - 107 16131888 soxS b4062 - DNA-binding transcriptional dual regulator 3814 52.04 0 4275492..4275956 + 154 16131889 soxR b4063 - DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing 3815 55.93 +1 4276502..4277851 + 449 16131890 yjcD b4064 - predicted permease 3816 55.82 0 4278003..4279652 + 549 16131891 yjcE b4065 - predicted cation/proton antiporter 3817 32.95 -2 4279806..4281098 - 430 16131892 yjcF b4066 - conserved protein 3818 55.76 0 4281276..4282925 - 549 16131893 actP b4067 - acetate transporter 3819 49.21 0 4282922..4283236 - 104 16131894 yjcH b4068 - conserved inner membrane protein involved in acetate transport 3820 56.87 +1 4283436..4285394 - 652 16131895 acs b4069 - acetyl-CoA synthetase 3821 52.26 0 4285787..4287223 + 478 16131896 nrfA b4070 - nitrite reductase, formate-dependent, cytochrome 3822 53.97 0 4287268..4287834 + 188 90111682 nrfB b4071 - nitrite reductase, formate-dependent, penta-heme cytochrome c 3823 57.89 +1 4287831..4288502 + 223 16131898 nrfC b4072 - formate-dependent nitrite reductase, 4Fe4S subunit 3824 57.58 +1 4288499..4289455 + 318 16131899 nrfD b4073 - formate-dependent nitrite reductase, membrane subunit 3825 57.32 +1 4289535..4291193 + 552 16131900 nrfE b4074 - heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE 3826 52.34 0 4291186..4291569 + 127 16131901 nrfF b4075 - heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF 3827 51.76 0 4291566..4292162 + 198 16131902 nrfG b4076 - heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG 3828 53.27 0 4292504..4293817 + 437 16131903 gltP b4077 - glutamate/aspartate:proton symporter 3829 49.71 0 4294459..4295148 - 229 16131904 yjcO b4078 - conserved protein 3830 54.38 0 4295242..4297389 - 715 16131905 fdhF b4079 - formate dehydrogenase-H, selenopolypeptide subunit 3831 55.76 0 4297587..4299053 - 488 16131906 mdtP b4080 - predicted outer membrane factor of efflux pump 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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