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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3668 54.76 0 4094002..4095471 - 489 16131744 rhaB b3904 - rhamnulokinase 3669 51.85 0 4095759..4096595 + 278 16131745 rhaS b3905 - DNA-binding transcriptional activator, L-rhamnose-binding 3670 50.18 0 4096669..4097517 + 282 171701684 rhaR b3906 - DNA-binding transcriptional activator, L-rhamnose-binding 3671 51.69 0 4097514..4098548 - 344 16131747 rhaT b3907 - L-rhamnose:proton symporter 3672 53.30 0 4098833..4099453 + 206 49176442 sodA b3908 - superoxide dismutase, Mn 3673 52.74 0 4099713..4100696 + 327 90111665 kdgT b3909 - 2-keto-3-deoxy-D-gluconate transporter 3674 53.04 0 4100845..4101519 + 224 90111666 yiiM b3910 - conserved protein 3675 54.59 0 4101625..4102998 - 457 16131751 cpxA b3911 - sensory histidine kinase in two-component regulatory system with CpxR 3676 51.36 0 4102995..4103693 - 232 16131752 cpxR b3912 - DNA-binding response regulator in two-component regulatory system with CpxA 3677 50.10 0 4103843..4104343 + 166 49176443 cpxP b4484 - periplasmic protein combats stress 3678 52.16 0 4104492..4105394 + 300 16131753 fieF b3915 - zinc transporter 3679 53.48 0 4105575..4106537 + 320 16131754 pfkA b3916 - 6-phosphofructokinase I 3680 50.61 0 4106857..4107846 + 329 16131755 sbp b3917 - sulfate transporter subunit 3681 48.68 0 4107953..4108708 + 251 16131756 cdh b3918 - CDP-diacylglycerol phosphotidylhydrolase 3682 52.60 0 4108763..4109530 - 255 16131757 tpiA b3919 - triosephosphate isomerase 3683 49.17 0 4109638..4110237 - 199 16131758 yiiQ b3920 - conserved protein 3684 49.43 0 4110338..4110778 + 146 16131759 yiiR b3921 - conserved inner membrane protein 3685 46.33 -1 4110990..4111289 + 99 16131760 yiiS b3922 - conserved protein 3686 43.12 -1 4111316..4111744 + 142 16131761 uspD b3923 - stress-induced protein 3687 53.55 0 4111749..4112495 - 248 16131762 fpr b3924 - ferredoxin-NADP reductase 3688 56.78 +1 4112592..4113602 - 336 16131763 glpX b3925 - fructose 1,6-bisphosphatase II 3689 54.08 0 4113737..4115245 - 502 16131764 glpK b3926 - glycerol kinase 3690 50.95 0 4115268..4116113 - 281 16131765 glpF b3927 - glycerol facilitator 3691 48.37 0 4116538..4116783 + 81 16131766 yiiU b3928 - conserved protein 3692 52.26 0 4116868..4117353 - 161 16131767 rraA b3929 - ribonuclease E (RNase E) inhibitor protein 3693 53.40 0 4117446..4118372 - 308 16131768 menA b3930 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3694 52.63 0 4118439..4119770 - 443 16131769 hslU b3931 - molecular chaperone and ATPase component of HslUV protease 3695 52.73 0 4119780..4120310 - 176 16131770 hslV b3932 - peptidase component of the HslUV protease 3696 57.40 +1 4120403..4121362 - 319 16131771 ftsN b3933 - essential cell division protein 3697 52.05 0 4121454..4122479 - 341 16131772 cytR b3934 - DNA-binding transcriptional dual regulator 3698 57.48 +1 4122635..4124833 - 732 16131773 priA b3935 - Primosome factor n' (replication factor Y) 3699 49.30 0 4125036..4125248 + 70 16131774 rpmE b3936 - 50S ribosomal subunit protein L31 3700 52.38 0 4125309..4125917 - 202 16131775 yiiX b3937 - predicted peptidoglycan peptidase 3701 51.89 0 4126101..4126418 - 105 16131776 metJ b3938 - DNA-binding transcriptional repressor, S-adenosylmethionine-binding 3702 54.95 0 4126695..4127855 + 386 16131777 metB b3939 - cystathionine gamma-synthase, PLP-dependent 3703 58.32 +1 4127858..4130290 + 810 16131778 metL b3940 - fused aspartokinase II/homoserine dehydrogenase II 3704 51.85 0 4130639..4131529 + 296 16131779 metF b3941 - 5,10-methylenetetrahydrofolate reductase 3705 55.75 0 4131858..4134038 + 726 16131780 katG b3942 - catalase/hydroperoxidase HPI(I) 3706 54.08 0 4134131..4135036 + 301 90111667 yijE b3943 - predicted permease 3707 52.59 0 4135063..4135680 - 205 16131782 yijF b3944 - conserved protein 3708 54.71 0 4135955..4137058 - 367 90111668 gldA b3945 - glycerol dehydrogenase, NAD 3709 53.39 0 4137069..4137731 - 220 16131784 fsaB b3946 - fructose-6-phosphate aldolase 2 3710 55.36 0 4137743..4140244 - 833 49176446 ptsA b3947 - fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component 3711 54.17 0 4140553..4141632 + 359 16131787 frwC b3949 - predicted enzyme IIC component of PTS 3712 49.22 0 4141647..4141967 + 106 16131788 frwB b3950 - predicted enzyme IIB component of PTS 3713 53.13 0 4142018..4144315 + 765 16131789 pflD b3951 - predicted formate acetyltransferase 2 (pyruvate formate lyase II) 3714 54.95 0 4144281..4145159 + 292 49176447 pflC b3952 - pyruvate formate lyase II activase 3715 56.14 +1 4145161..4145502 + 113 16131791 frwD b3953 - predicted enzyme IIB component of PTS 3716 53.05 0 4145489..4146340 - 283 16131792 yijO b3954 - predicted DNA-binding transcriptional regulator 3717 50.00 0 4146555..4148288 - 577 16131793 yijP b3955 - conserved inner membrane protein 3718 55.66 0 4148470..4151121 - 883 16131794 ppc b3956 - phosphoenolpyruvate carboxylase 3719 51.74 0 4151719..4152870 - 383 16131795 argE b3957 - acetylornithine deacetylase 3720 53.53 0 4153024..4154028 + 334 16131796 argC b3958 - N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 3721 55.47 0 4154036..4154812 + 258 145698337 argB b3959 - acetylglutamate kinase 3722 56.48 +1 4154873..4156246 + 457 16131798 argH b3960 - argininosuccinate lyase 3723 55.45 0 4156513..4157430 + 305 16131799 oxyR b3961 - DNA-binding transcriptional dual regulator 3724 51.82 0 4157413..4158813 - 466 90111670 sthA b3962 - pyridine nucleotide transhydrogenase, soluble 3725 53.40 0 4159147..4159794 + 215 145698338 fabR b3963 - DNA-binding transcriptional repressor 3726 49.17 0 4159794..4160153 + 119 16131802 yijD b3964 - conserved inner membrane protein 3727 50.86 0 4160193..4161293 - 366 16131803 trmA b3965 - tRNA (uracil-5-)-methyltransferase 3728 50.24 0 4161662..4163506 + 614 16131804 btuB b3966 - vitamin B12/cobalamin outer membrane transporter 3729 51.52 0 4163451..4164308 + 285 90111671 murI b3967 - glutamate racemase 3730 45.97 -1 4170080..4171108 + 342 16131806 murB b3972 - UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding 3731 49.38 0 4171105..4172070 + 321 16131807 birA b3973 - bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding 3732 44.06 -1 4172099..4173049 - 316 16131808 coaA b3974 - pantothenate kinase 3733 53.42 0 4173967..4175151 + 394 16131810 tufB b3980 - protein chain elongation factor EF-Tu (duplicate of tufA) 3734 54.95 0 4175381..4175764 + 127 16131811 secE b3981 - preprotein translocase membrane subunit 3735 51.65 0 4175766..4176311 + 181 16131812 nusG b3982 - transcription termination factor 3736 52.21 0 4176470..4176898 + 142 16131813 rplK b3983 - 50S ribosomal subunit protein L11 3737 51.63 0 4176902..4177606 + 234 16131814 rplA b3984 - 50S ribosomal subunit protein L1 3738 52.41 0 4178019..4178516 + 165 16131815 rplJ b3985 - 50S ribosomal subunit protein L10 3739 46.17 -1 4178583..4178948 + 121 16131816 rplL b3986 - 50S ribosomal subunit protein L7/L12 3740 52.62 0 4179268..4183296 + 1342 16131817 rpoB b3987 - RNA polymerase, beta subunit 3741 53.84 0 4183373..4187596 + 1407 16131818 rpoC b3988 - RNA polymerase, beta prime subunit 3742 42.41 -1 4187809..4188348 + 179 16131819 yjaZ b3989 - heat shock protein 3743 55.03 0 4188758..4189891 - 377 16131820 thiH b3990 - thiamin biosynthesis ThiGH complex subunit 3744 58.50 +1 4189888..4190658 - 256 33347812 thiG b3991 - thiamin biosynthesis ThiGH complex subunit 3745 55.72 0 4190660..4190860 - 66 49176448 thiS b4407 - sulphur carrier protein 3746 57.54 +1 4190844..4191599 - 251 90111672 thiF b3992 - thiamin (thiazole moiety) biosynthesis protein 3747 58.02 +1 4191592..4192227 - 211 16131823 thiE b3993 - thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) 3748 55.75 0 4192227..4194122 - 631 16131824 thiC b3994 - thiamin (pyrimidine moiety) biosynthesis protein 3749 49.06 0 4194355..4194831 - 158 16131825 rsd b3995 - stationary phase protein, binds sigma 70 RNA polymerase subunit 3750 53.23 0 4194926..4195699 + 257 49176450 nudC b3996 - NADH pyrophosphatase 3751 56.06 +1 4195739..4196803 + 354 16131827 hemE b3997 - uroporphyrinogen decarboxylase 3752 58.78 +1 4196813..4197484 + 223 90111673 nfi b3998 - endonuclease V 3753 48.56 0 4197527..4198117 + 196 16131829 yjaG b3999 - conserved protein 3754 48.35 0 4198304..4198576 + 90 16131830 hupA b4000 - HU, DNA-binding transcriptional regulator, alpha subunit 3755 53.45 0 4198589..4199284 + 231 16131831 yjaH b4001 - conserved protein 3756 53.52 0 4199286..4199711 - 141 90111674 zraP b4002 - Zn-binding periplasmic protein 3757 54.29 0 4199949..4201346 + 465 16131833 zraS b4003 - sensory histidine kinase in two-component regulatory system with ZraR 3758 56.26 +1 4201343..4202668 + 441 16131834 zraR b4004 - fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein 3759 58.22 +1 4202665..4203954 - 429 16131835 purD b4005 - phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 3760 56.29 +1 4203966..4205555 - 529 16131836 purH b4006 - fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase 3761 45.31 -1 4211257..4211640 + 127 16131837 yjaA b4011 - conserved protein 3762 54.50 0 4211703..4212146 - 147 16131838 yjaB b4012 - predicted acetyltransferase 3763 50.00 0 4212303..4213232 + 309 16131839 metA b4013 - homoserine O-transsuccinylase 3764 51.75 0 4213501..4215102 + 533 16131840 aceB b4014 - malate synthase A 3765 55.33 0 4215132..4216436 + 434 16131841 aceA b4015 - isocitrate lyase 3766 52.79 0 4216619..4218355 + 578 16131842 aceK b4016 - isocitrate dehydrogenase kinase/phosphatase 3767 37.63 -2 4218324..4220510 - 728 16131843 arpA b4017 - ankyrin repeat protein, function unknown 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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