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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3628 51.96 0 4044989..4047775 + 928 16131704 polA b3863 - DNA polymerase I 3629 51.66 0 4048156..4048788 - 210 145698334 yihA b3865 - GTP-binding protein 3630 52.35 0 4049370..4049879 + 169 16131706 yihI b3866 - conserved protein 3631 53.13 0 4050068..4051441 + 457 90111657 hemN b3867 - coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 3632 56.95 +1 4051892..4053301 - 469 16131708 glnG b3868 - fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein 3633 55.24 0 4053313..4054362 - 349 16131709 glnL b3869 - sensory histidine kinase in two-component regulatory system with GlnG 3634 52.91 0 4054648..4056057 - 469 16131710 glnA b3870 - glutamine synthetase 3635 53.45 0 4056430..4058253 + 607 49176434 typA b3871 - GTP-binding protein 3636 49.09 0 4058470..4059180 + 236 16131712 yihL b3872 - predicted DNA-binding transcriptional regulator 3637 43.93 -1 4059188..4060168 + 326 16131713 yihM b3873 - predicted sugar phosphate isomerase 3638 45.02 -1 4060270..4061535 + 421 16131714 yihN b3874 - predicted transporter 3639 40.84 -2 4061626..4062318 - 230 16131715 ompL b3875 - predicted outer membrane porin L 3640 45.01 -1 4062386..4063789 - 467 49176435 yihO b3876 - predicted transporter 3641 52.38 0 4063832..4065217 - 461 145698335 yihP b3877 - predicted transporter 3642 53.51 0 4065263..4067299 - 678 16131718 yihQ b3878 - alpha-glucosidase 3643 48.22 0 4067498..4068424 - 308 49176437 yihR b3879 - predicted aldose-1-epimerase 3644 53.30 0 4068538..4069779 - 413 90111658 yihS b3880 - predicted glucosamine isomerase 3645 53.81 0 4069796..4070674 - 292 16131721 yihT b3881 - predicted aldolase 3646 55.30 0 4070698..4071594 - 298 16131722 yihU b3882 - predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain 3647 55.63 0 4071762..4072658 + 298 90111659 yihV b3883 - predicted sugar kinase 3648 52.42 0 4072692..4073477 + 261 90111660 yihW b3884 - predicted DNA-binding transcriptional regulator 3649 50.50 0 4073576..4074175 + 199 90111661 yihX b3885 - predicted hydrolase 3650 50.86 0 4074169..4075041 + 290 16131726 yihY b3886 - predicted inner membrane protein 3651 55.02 0 4075038..4075475 + 145 16131727 dtd b3887 - D-tyr-tRNA(Tyr) deacylase 3652 55.05 0 4075472..4076461 + 329 16131728 yiiD b3888 - predicted acetyltransferase 3653 46.48 0 4077320..4077532 + 70 145698336 yiiE b3889 - predicted transcriptional regulator 3654 46.12 -1 4077774..4077992 + 72 90111663 yiiF b3890 - conserved protein 3655 54.62 0 4078322..4079251 - 309 16131731 fdhE b3891 - formate dehydrogenase formation protein 3656 52.52 0 4079248..4079883 - 211 16131732 fdoI b3892 - formate dehydrogenase-O, cytochrome b556 subunit 3657 55.48 0 4079880..4080782 - 300 16131733 fdoH b3893 - formate dehydrogenase-O, Fe-S subunit 3658 55.10 0 4080795..4083845 - 1016 16131734 fdoG b3894 - formate dehydrogenase-O, large subunit 3659 53.12 0 4084039..4084872 + 277 16131735 fdhD b3895 - formate dehydrogenase formation protein 3660 45.64 -1 4085025..4086080 + 351 16131736 yiiG b3896 - conserved protein 3661 50.03 0 4086130..4087878 - 582 16131737 frvR b3897 - predicted regulator 3662 52.57 0 4087878..4088948 - 356 16131738 frvX b3898 - predicted endo-1,4-beta-glucanase 3663 55.92 +1 4088938..4090389 - 483 90111664 frvB b3899 - fused predicted PTS enzymes: IIB component/IIC component 3664 50.11 0 4090400..4090846 - 148 16131740 frvA b3900 - predicted enzyme IIA component of PTS 3665 50.79 0 4091147..4091461 - 104 16131741 rhaM b3901 - L-rhamnose mutarotase 3666 55.76 0 4091471..4092295 - 274 16131742 rhaD b3902 - rhamnulose-1-phosphate aldolase 3667 56.11 +1 4092746..4094005 - 419 49176441 rhaA b3903 - L-rhamnose isomerase 3668 54.76 0 4094002..4095471 - 489 16131744 rhaB b3904 - rhamnulokinase 3669 51.85 0 4095759..4096595 + 278 16131745 rhaS b3905 - DNA-binding transcriptional activator, L-rhamnose-binding 3670 50.18 0 4096669..4097517 + 282 171701684 rhaR b3906 - DNA-binding transcriptional activator, L-rhamnose-binding 3671 51.69 0 4097514..4098548 - 344 16131747 rhaT b3907 - L-rhamnose:proton symporter 3672 53.30 0 4098833..4099453 + 206 49176442 sodA b3908 - superoxide dismutase, Mn 3673 52.74 0 4099713..4100696 + 327 90111665 kdgT b3909 - 2-keto-3-deoxy-D-gluconate transporter 3674 53.04 0 4100845..4101519 + 224 90111666 yiiM b3910 - conserved protein 3675 54.59 0 4101625..4102998 - 457 16131751 cpxA b3911 - sensory histidine kinase in two-component regulatory system with CpxR 3676 51.36 0 4102995..4103693 - 232 16131752 cpxR b3912 - DNA-binding response regulator in two-component regulatory system with CpxA 3677 50.10 0 4103843..4104343 + 166 49176443 cpxP b4484 - periplasmic protein combats stress 3678 52.16 0 4104492..4105394 + 300 16131753 fieF b3915 - zinc transporter 3679 53.48 0 4105575..4106537 + 320 16131754 pfkA b3916 - 6-phosphofructokinase I 3680 50.61 0 4106857..4107846 + 329 16131755 sbp b3917 - sulfate transporter subunit 3681 48.68 0 4107953..4108708 + 251 16131756 cdh b3918 - CDP-diacylglycerol phosphotidylhydrolase 3682 52.60 0 4108763..4109530 - 255 16131757 tpiA b3919 - triosephosphate isomerase 3683 49.17 0 4109638..4110237 - 199 16131758 yiiQ b3920 - conserved protein 3684 49.43 0 4110338..4110778 + 146 16131759 yiiR b3921 - conserved inner membrane protein 3685 46.33 -1 4110990..4111289 + 99 16131760 yiiS b3922 - conserved protein 3686 43.12 -1 4111316..4111744 + 142 16131761 uspD b3923 - stress-induced protein 3687 53.55 0 4111749..4112495 - 248 16131762 fpr b3924 - ferredoxin-NADP reductase 3688 56.78 +1 4112592..4113602 - 336 16131763 glpX b3925 - fructose 1,6-bisphosphatase II 3689 54.08 0 4113737..4115245 - 502 16131764 glpK b3926 - glycerol kinase 3690 50.95 0 4115268..4116113 - 281 16131765 glpF b3927 - glycerol facilitator 3691 48.37 0 4116538..4116783 + 81 16131766 yiiU b3928 - conserved protein 3692 52.26 0 4116868..4117353 - 161 16131767 rraA b3929 - ribonuclease E (RNase E) inhibitor protein 3693 53.40 0 4117446..4118372 - 308 16131768 menA b3930 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3694 52.63 0 4118439..4119770 - 443 16131769 hslU b3931 - molecular chaperone and ATPase component of HslUV protease 3695 52.73 0 4119780..4120310 - 176 16131770 hslV b3932 - peptidase component of the HslUV protease 3696 57.40 +1 4120403..4121362 - 319 16131771 ftsN b3933 - essential cell division protein 3697 52.05 0 4121454..4122479 - 341 16131772 cytR b3934 - DNA-binding transcriptional dual regulator 3698 57.48 +1 4122635..4124833 - 732 16131773 priA b3935 - Primosome factor n' (replication factor Y) 3699 49.30 0 4125036..4125248 + 70 16131774 rpmE b3936 - 50S ribosomal subunit protein L31 3700 52.38 0 4125309..4125917 - 202 16131775 yiiX b3937 - predicted peptidoglycan peptidase 3701 51.89 0 4126101..4126418 - 105 16131776 metJ b3938 - DNA-binding transcriptional repressor, S-adenosylmethionine-binding 3702 54.95 0 4126695..4127855 + 386 16131777 metB b3939 - cystathionine gamma-synthase, PLP-dependent 3703 58.32 +1 4127858..4130290 + 810 16131778 metL b3940 - fused aspartokinase II/homoserine dehydrogenase II 3704 51.85 0 4130639..4131529 + 296 16131779 metF b3941 - 5,10-methylenetetrahydrofolate reductase 3705 55.75 0 4131858..4134038 + 726 16131780 katG b3942 - catalase/hydroperoxidase HPI(I) 3706 54.08 0 4134131..4135036 + 301 90111667 yijE b3943 - predicted permease 3707 52.59 0 4135063..4135680 - 205 16131782 yijF b3944 - conserved protein 3708 54.71 0 4135955..4137058 - 367 90111668 gldA b3945 - glycerol dehydrogenase, NAD 3709 53.39 0 4137069..4137731 - 220 16131784 fsaB b3946 - fructose-6-phosphate aldolase 2 3710 55.36 0 4137743..4140244 - 833 49176446 ptsA b3947 - fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component 3711 54.17 0 4140553..4141632 + 359 16131787 frwC b3949 - predicted enzyme IIC component of PTS 3712 49.22 0 4141647..4141967 + 106 16131788 frwB b3950 - predicted enzyme IIB component of PTS 3713 53.13 0 4142018..4144315 + 765 16131789 pflD b3951 - predicted formate acetyltransferase 2 (pyruvate formate lyase II) 3714 54.95 0 4144281..4145159 + 292 49176447 pflC b3952 - pyruvate formate lyase II activase 3715 56.14 +1 4145161..4145502 + 113 16131791 frwD b3953 - predicted enzyme IIB component of PTS 3716 53.05 0 4145489..4146340 - 283 16131792 yijO b3954 - predicted DNA-binding transcriptional regulator 3717 50.00 0 4146555..4148288 - 577 16131793 yijP b3955 - conserved inner membrane protein 3718 55.66 0 4148470..4151121 - 883 16131794 ppc b3956 - phosphoenolpyruvate carboxylase 3719 51.74 0 4151719..4152870 - 383 16131795 argE b3957 - acetylornithine deacetylase 3720 53.53 0 4153024..4154028 + 334 16131796 argC b3958 - N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 3721 55.47 0 4154036..4154812 + 258 145698337 argB b3959 - acetylglutamate kinase 3722 56.48 +1 4154873..4156246 + 457 16131798 argH b3960 - argininosuccinate lyase 3723 55.45 0 4156513..4157430 + 305 16131799 oxyR b3961 - DNA-binding transcriptional dual regulator 3724 51.82 0 4157413..4158813 - 466 90111670 sthA b3962 - pyridine nucleotide transhydrogenase, soluble 3725 53.40 0 4159147..4159794 + 215 145698338 fabR b3963 - DNA-binding transcriptional repressor 3726 49.17 0 4159794..4160153 + 119 16131802 yijD b3964 - conserved inner membrane protein 3727 50.86 0 4160193..4161293 - 366 16131803 trmA b3965 - tRNA (uracil-5-)-methyltransferase 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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