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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3564 53.75 0 3970545..3971612 + 355 49176411 rffG b3788 - dTDP-glucose 4,6-dehydratase 3565 55.10 0 3971631..3972512 + 293 16131645 rffH b3789 - glucose-1-phosphate thymidylyltransferase 3566 55.56 0 3972490..3973164 + 224 145698332 rffC b3790 - TDP-fucosamine acetyltransferase 3567 54.38 0 3973169..3974299 + 376 16131647 rffA b3791 - TDP-4-oxo-6-deoxy-D-glucose transaminase 3568 53.64 0 3974301..3975551 + 416 16131648 wzxE b3792 - O-antigen translocase 3569 52.87 0 3975548..3976627 + 359 49176413 rffT b4481 - TDP-Fuc4NAc:lipidIIFuc4NAc transferase 3570 52.40 0 3976624..3977976 + 450 16131649 wzyE b3793 - predicted Wzy protein involved in ECA polysaccharide chain elongation 3571 53.17 0 3977979..3978719 + 246 16131650 rffM b3794 - UDP-N-acetyl-D-mannosaminuronic acid transferase 3572 53.46 0 3978910..3980295 + 461 49176414 yifK b3795 - predicted transporter 3573 52.67 0 3980981..3982216 + 411 49176415 aslB b3800 - predicted regulator of arylsulfatase activity 3574 53.20 0 3982375..3984030 - 551 16131653 aslA b3801 - acrylsulfatase-like enzyme 3575 54.97 0 3984709..3985905 - 398 16131654 hemY b3802 - predicted protoheme IX synthesis protein 3576 53.38 0 3985908..3987089 - 393 16131655 hemX b3803 - predicted uroporphyrinogen III methylase 3577 52.90 0 3987111..3987851 - 246 16131656 hemD b3804 - uroporphyrinogen III synthase 3578 56.16 +1 3987848..3988789 - 313 49176416 hemC b3805 - hydroxymethylbilane synthase 3579 51.94 0 3989176..3991722 + 848 16131658 cyaA b3806 - adenylate cyclase 3580 53.89 0 3991762..3992082 - 106 16131659 cyaY b3807 - frataxin, iron-binding and oxidizing protein 3581 52.45 0 3992545..3992748 + 67 94541130 yifL b4558 - predicted lipoprotein 3582 55.15 0 3992785..3993609 + 274 90111650 dapF b3809 - diaminopimelate epimerase 3583 55.79 0 3993606..3994313 + 235 16131662 yigA b3810 - conserved protein 3584 53.96 0 3994310..3995206 + 298 16131663 xerC b3811 - site-specific tyrosine recombinase 3585 55.79 0 3995206..3995922 + 238 16131664 yigB b3812 - predicted hydrolase 3586 57.70 +1 3996006..3998168 + 720 16131665 uvrD b3813 - DNA-dependent ATPase I and helicase II 3587 47.84 0 3998315..3999079 - 254 49176417 yigE b4482 - predicted protein 3588 52.68 0 3999449..4000399 + 316 16131666 corA b3816 - magnesium/nickel/cobalt transporter 3589 34.91 -2 4000442..4000822 - 126 16131667 yigF b3817 - conserved inner membrane protein 3590 32.81 -2 4000836..4001216 - 126 90111651 yigG b3818 - predicted inner membrane protein 3591 50.62 0 4001311..4002201 - 296 49176418 rarD b3819 - predicted chloramphenical resistance permease 3592 53.21 0 4002253..4002720 - 155 90111652 yigI b3820 - conserved protein 3593 51.26 0 4002885..4003754 + 289 16131671 pldA b3821 - outer membrane phospholipase A 3594 55.14 0 4003887..4005716 + 609 162135918 recQ b3822 - ATP-dependent DNA helicase 3595 52.50 0 4005780..4006400 + 206 49176421 rhtC b3823 - threonine efflux system 3596 52.17 0 4006462..4007082 - 206 49176422 rhtB b3824 - neutral amino-acid efflux system 3597 53.76 0 4007193..4008215 + 340 49176423 pldB b3825 - lysophospholipase L(2) 3598 51.56 0 4008223..4009023 + 266 49176424 yigL b3826 - predicted hydrolase 3599 55.56 0 4009099..4009998 + 299 16131676 yigM b3827 - predicted inner membrane protein 3600 56.29 +1 4009886..4010839 - 317 16131677 metR b3828 - DNA-binding transcriptional activator, homocysteine-binding 3601 56.23 +1 4011076..4013337 + 753 16131678 metE b3829 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase 3602 54.53 0 4013377..4014192 - 271 49176425 ysgA b3830 - predicted hydrolase 3603 54.07 0 4014454..4015215 + 253 16131680 udp b3831 - uridine phosphorylase 3604 53.08 0 4015356..4016783 + 475 16131681 rmuC b3832 - predicted recombination limiting protein 3605 52.12 0 4016878..4017633 + 251 49176426 ubiE b3833 - bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase 3606 55.78 0 4017647..4018252 + 201 16131683 yigP b3834 - conserved protein 3607 49.97 0 4018249..4019889 + 546 16131684 ubiB b3835 - 2-octaprenylphenol hydroxylase 3608 45.56 -1 4019968..4020237 + 89 90111653 tatA b3836 - TatABCE protein translocation system subunit 3609 55.43 0 4020241..4020756 + 171 49176428 tatB b3838 - TatABCE protein translocation system subunit 3610 51.61 0 4020759..4021535 + 258 16131687 tatC b3839 - TatABCE protein translocation system subunit 3611 54.28 0 4021577..4022359 + 260 49176429 tatD b4483 - DNase, magnesium-dependent 3612 49.69 0 4022356..4022844 - 162 16131688 rfaH b3842 - DNA-binding transcriptional antiterminator 3613 53.82 0 4023011..4024504 + 497 16131689 ubiD b3843 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3614 52.85 0 4024550..4025251 + 233 16131690 fre b3844 - flavin reductase 3615 57.73 +1 4025632..4026795 - 387 49176430 fadA b3845 - 3-ketoacyl-CoA thiolase (thiolase I) 3616 55.21 0 4026805..4028994 - 729 16131692 fadB b3846 - fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 3617 53.68 0 4029184..4030515 + 443 16131693 pepQ b3847 - proline dipeptidase 3618 55.61 0 4030515..4031129 + 204 90111654 yigZ b3848 - predicted elongation factor 3619 53.10 0 4031168..4032619 + 483 49176432 trkH b3849 - potassium transporter 3620 51.83 0 4032631..4033176 + 181 16131696 hemG b3850 - protoporphyrin oxidase, flavoprotein 3621 48.67 0 4038929..4039456 - 175 145698333 mobB b3856 - molybdopterin-guanine dinucleotide biosynthesis protein B 3622 50.09 0 4039438..4040022 - 194 16131698 mobA b3857 - molybdopterin-guanine dinucleotide synthase 3623 46.30 -1 4040092..4040361 + 89 16131699 yihD b3858 - conserved protein 3624 48.63 0 4040438..4041424 + 328 16131700 rdoA b3859 - Thr/Ser kinase implicated in Cpx stress response 3625 48.01 0 4041441..4042067 + 208 16131701 dsbA b3860 - periplasmic protein disulfide isomerase I 3626 41.65 -2 4042222..4043652 + 476 90111655 yihF b3861 - conserved protein 3627 45.12 -1 4043693..4044625 - 310 16131703 yihG b3862 - predicted endonuclease 3628 51.96 0 4044989..4047775 + 928 16131704 polA b3863 - DNA polymerase I 3629 51.66 0 4048156..4048788 - 210 145698334 yihA b3865 - GTP-binding protein 3630 52.35 0 4049370..4049879 + 169 16131706 yihI b3866 - conserved protein 3631 53.13 0 4050068..4051441 + 457 90111657 hemN b3867 - coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 3632 56.95 +1 4051892..4053301 - 469 16131708 glnG b3868 - fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein 3633 55.24 0 4053313..4054362 - 349 16131709 glnL b3869 - sensory histidine kinase in two-component regulatory system with GlnG 3634 52.91 0 4054648..4056057 - 469 16131710 glnA b3870 - glutamine synthetase 3635 53.45 0 4056430..4058253 + 607 49176434 typA b3871 - GTP-binding protein 3636 49.09 0 4058470..4059180 + 236 16131712 yihL b3872 - predicted DNA-binding transcriptional regulator 3637 43.93 -1 4059188..4060168 + 326 16131713 yihM b3873 - predicted sugar phosphate isomerase 3638 45.02 -1 4060270..4061535 + 421 16131714 yihN b3874 - predicted transporter 3639 40.84 -2 4061626..4062318 - 230 16131715 ompL b3875 - predicted outer membrane porin L 3640 45.01 -1 4062386..4063789 - 467 49176435 yihO b3876 - predicted transporter 3641 52.38 0 4063832..4065217 - 461 145698335 yihP b3877 - predicted transporter 3642 53.51 0 4065263..4067299 - 678 16131718 yihQ b3878 - alpha-glucosidase 3643 48.22 0 4067498..4068424 - 308 49176437 yihR b3879 - predicted aldose-1-epimerase 3644 53.30 0 4068538..4069779 - 413 90111658 yihS b3880 - predicted glucosamine isomerase 3645 53.81 0 4069796..4070674 - 292 16131721 yihT b3881 - predicted aldolase 3646 55.30 0 4070698..4071594 - 298 16131722 yihU b3882 - predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain 3647 55.63 0 4071762..4072658 + 298 90111659 yihV b3883 - predicted sugar kinase 3648 52.42 0 4072692..4073477 + 261 90111660 yihW b3884 - predicted DNA-binding transcriptional regulator 3649 50.50 0 4073576..4074175 + 199 90111661 yihX b3885 - predicted hydrolase 3650 50.86 0 4074169..4075041 + 290 16131726 yihY b3886 - predicted inner membrane protein 3651 55.02 0 4075038..4075475 + 145 16131727 dtd b3887 - D-tyr-tRNA(Tyr) deacylase 3652 55.05 0 4075472..4076461 + 329 16131728 yiiD b3888 - predicted acetyltransferase 3653 46.48 0 4077320..4077532 + 70 145698336 yiiE b3889 - predicted transcriptional regulator 3654 46.12 -1 4077774..4077992 + 72 90111663 yiiF b3890 - conserved protein 3655 54.62 0 4078322..4079251 - 309 16131731 fdhE b3891 - formate dehydrogenase formation protein 3656 52.52 0 4079248..4079883 - 211 16131732 fdoI b3892 - formate dehydrogenase-O, cytochrome b556 subunit 3657 55.48 0 4079880..4080782 - 300 16131733 fdoH b3893 - formate dehydrogenase-O, Fe-S subunit 3658 55.10 0 4080795..4083845 - 1016 16131734 fdoG b3894 - formate dehydrogenase-O, large subunit 3659 53.12 0 4084039..4084872 + 277 16131735 fdhD b3895 - formate dehydrogenase formation protein 3660 45.64 -1 4085025..4086080 + 351 16131736 yiiG b3896 - conserved protein 3661 50.03 0 4086130..4087878 - 582 16131737 frvR b3897 - predicted regulator 3662 52.57 0 4087878..4088948 - 356 16131738 frvX b3898 - predicted endo-1,4-beta-glucanase 3663 55.92 +1 4088938..4090389 - 483 90111664 frvB b3899 - fused predicted PTS enzymes: IIB component/IIC component 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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