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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3293 39.74 -2 3652706..3653236 + 176 16131379 dctR b3507 - predicted DNA-binding ranscriptional regulator 3294 45.52 -1 3653278..3653925 - 215 16131380 yhiD b3508 - predicted Mg(2+) transport ATPase inner membrane protein 3295 40.06 -2 3653989..3654315 - 108 162135912 hdeB b3509 - acid-resistance protein 3296 42.94 -1 3654431..3654763 - 110 16131382 hdeA b3510 - stress response protein acid-resistance protein 3297 46.60 0 3655018..3655590 + 190 16131383 hdeD b3511 - acid-resistance membrane protein 3298 32.95 -2 3656389..3656916 + 175 16131384 gadE b3512 - DNA-binding transcriptional activator 3299 54.58 0 3657255..3658412 + 385 16131385 mdtE b3513 - multidrug resistance efflux transporter 3300 53.02 0 3658437..3661550 + 1037 16131386 mdtF b3514 - multidrug transporter, RpoS-dependent 3301 41.84 -1 3661913..3662641 - 242 16131387 gadW b3515 - DNA-binding transcriptional activator 3302 40.97 -2 3663009..3663833 - 274 16131388 gadX b3516 - DNA-binding transcriptional dual regulator 3303 53.96 0 3664203..3665603 - 466 16131389 gadA b3517 - glutamate decarboxylase A, PLP-dependent 3304 48.43 0 3665814..3667211 - 465 16131390 yhjA b3518 - predicted cytochrome C peroxidase 3305 53.94 0 3667615..3669264 + 549 16131391 treF b3519 - cytoplasmic trehalase 3306 47.76 0 3669315..3669917 - 200 16131392 yhjB b3520 - predicted DNA-binding response regulator in two-component regulatory system 3307 53.33 0 3670437..3671336 + 299 145698322 yhjC b3521 - predicted DNA-binding transcriptional regulator 3308 52.66 0 3671385..3672398 + 337 16131394 yhjD b3522 - conserved inner membrane protein 3309 55.63 0 3672809..3674131 + 440 16131395 yhjE b3523 - predicted transporter 3310 53.23 0 3674313..3676388 - 691 16131396 yhjG b3524 - predicted outer membrane biogenesis protein 3311 52.73 0 3676443..3677210 - 255 90111605 yhjH b3525 - EAL domain containing protein involved in flagellar function 3312 57.10 +1 3677442..3678371 + 309 90111606 kdgK b3526 - ketodeoxygluconokinase 3313 53.44 0 3678467..3679963 - 498 16131399 yhjJ b3527 - predicted zinc-dependent peptidase 3314 51.67 0 3680184..3681470 - 428 16131400 dctA b3528 - C4-dicarboxylic acid, orotate and citrate transporter 3315 52.61 0 3681653..3683608 - 651 145698323 yhjK b3529 - predicted diguanylate cyclase 3316 57.23 +1 3683723..3687145 - 1140 145698324 bcsC b3530 - cellulose synthase subunit 3317 54.74 0 3687178..3688284 - 368 16131403 bcsZ b3531 - endo-1,4-D-glucanase 3318 54.91 0 3688291..3690630 - 779 16131404 bcsB b3532 - regulator of cellulose synthase, cyclic di-GMP binding 3319 55.36 0 3690641..3693259 - 872 90111609 bcsA b3533 - cellulose synthase, catalytic subunit 3320 46.03 -1 3694020..3694208 - 62 16131407 yhjR b3535 - conserved protein 3321 48.85 0 3694481..3696052 + 523 16131408 bcsE b3536 - conserved protein 3322 48.44 0 3696049..3696240 + 63 90111610 bcsF b3537 - predicted protein 3323 52.68 0 3696237..3697916 + 559 16131410 bcsG b3538 - predicted inner membrane protein 3324 52.78 0 3698003..3698110 - 35 49176368 ldrD b4453 - toxic polypeptide, small 3325 45.44 -1 3698586..3699857 + 423 16131411 yhjV b3539 - predicted transporter 3326 56.12 +1 3699887..3700891 - 334 16131412 dppF b3540 - dipeptide transporter 3327 56.71 +1 3700888..3701871 - 327 16131413 dppD b3541 - dipeptide transporter 3328 59.03 +1 3701882..3702784 - 300 16131414 dppC b3542 - dipeptide transporter 3329 56.47 +1 3702794..3703813 - 339 16131415 dppB b3543 - dipeptide transporter 3330 51.55 0 3704121..3705728 - 535 16131416 dppA b3544 - dipeptide transporter 3331 50.41 0 3706807..3708498 - 563 90111611 eptB b3546 - predicted metal dependent hydrolase 3332 51.20 0 3708822..3710030 - 402 16131418 yhjX b3547 - predicted transporter 3333 50.21 0 3710259..3710957 - 232 90111612 yhjY b3548 - conserved protein 3334 49.82 0 3711115..3711678 + 187 16131420 tag b3549 - 3-methyl-adenine DNA glycosylase I, constitutive 3335 52.15 0 3711675..3712115 + 146 16131421 yiaC b3550 - predicted acyltransferase with acyl-CoA N-acyltransferase domain 3336 54.41 0 3712084..3714417 - 777 145698325 bisC b3551 - biotin sulfoxide reductase 3337 57.88 +1 3714570..3715229 + 219 49176370 yiaD b3552 - predicted outer membrane lipoprotein 3338 52.00 0 3715333..3716307 + 324 90111614 ghrB b3553 - 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) 3339 50.49 0 3716357..3717067 - 236 90111615 yiaF b3554 - conserved protein 3340 43.99 -1 3717501..3717791 + 96 16131426 yiaG b3555 - predicted transcriptional regulator 3341 48.36 0 3718072..3718284 + 70 16131427 cspA b3556 - major cold shock protein 3342 35.29 -2 3718471..3718623 - 50 49176371 hokA b4455 - toxic polypeptide, small 3343 46.17 -1 3718703..3719224 + 173 16131428 insJ b3557 - IS150 protein InsA 3344 42.84 -1 3719221..3720072 + 283 16131429 insK b3558 - IS150 conserved protein InsB 3345 55.41 0 3720351..3722420 - 689 16131430 glyS b3559 - glycine tRNA synthetase, beta subunit 3346 56.14 +1 3722430..3723341 - 303 16131431 glyQ b3560 - glycine tRNA synthetase, alpha subunit 3347 47.67 0 3723436..3723735 - 99 94541126 ysaB b4553 - predicted protein 3348 46.79 0 3723910..3724905 + 331 16131432 wecH b3561 - conserved inner membrane protein 3349 41.10 -2 3724947..3725384 - 145 90111616 yiaA b3562 - conserved inner membrane protein 3350 41.52 -2 3725430..3725771 - 113 90111617 yiaB b3563 - conserved inner membrane protein 3351 54.78 0 3725940..3727394 - 484 16131435 xylB b3564 - xylulokinase 3352 50.87 0 3727466..3728788 - 440 16131436 xylA b3565 - D-xylose isomerase 3353 44.01 -1 3729154..3730146 + 330 16131437 xylF b3566 - D-xylose transporter subunit 3354 47.08 0 3730224..3731765 + 513 16131438 xylG b3567 - fused D-xylose transporter subunits of ABC superfamily: ATP-binding components 3355 53.89 0 3731743..3732924 + 393 16131439 xylH b3568 - D-xylose transporter subunit 3356 48.77 0 3733002..3734180 + 392 16131440 xylR b3569 - DNA-binding transcriptional activator, xylose-binding 3357 48.24 0 3734376..3735200 - 274 49176373 bax b3570 - conserved protein 3358 52.83 0 3735520..3737550 + 676 16131442 malS b3571 - alpha-amylase 3359 52.15 0 3737728..3738981 + 417 49176374 avtA b3572 - valine-pyruvate aminotransferase 3360 53.59 0 3739132..3739605 - 157 16131444 ysaA b3573 - predicted hydrogenase, 4Fe-4S ferredoxin-type component 3361 52.18 0 3739707..3740555 - 282 16131445 yiaJ b3574 - predicted DNA-binding transcriptional repressor 3362 53.05 0 3740756..3741754 + 332 16131446 yiaK b3575 - 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent 3363 45.30 -1 3741766..3742233 + 155 16131447 yiaL b3576 - conserved protein 3364 44.09 -1 3742351..3742824 + 157 16131448 yiaM b3577 - predicted transporter 3365 50.86 0 3742827..3744104 + 425 49176375 yiaN b3578 - predicted transporter 3366 51.17 0 3744117..3745103 + 328 16131450 yiaO b3579 - predicted transporter 3367 57.45 +1 3745107..3746603 + 498 16131451 lyx b3580 - L-xylulose kinase 3368 59.43 +1 3746600..3747262 + 220 16131452 sgbH b3581 - 3-keto-L-gulonate 6-phosphate decarboxylase 3369 55.75 0 3747255..3748115 + 286 90111618 sgbU b3582 - predicted L-xylulose 5-phosphate 3-epimerase 3370 57.33 +1 3748109..3748804 + 231 16131454 sgbE b3583 - L-ribulose-5-phosphate 4-epimerase 3371 48.72 0 3749151..3749891 - 246 16131455 yiaT b3584 - predicted protein 3372 47.69 0 3750015..3750989 + 324 16131456 yiaU b3585 - predicted DNA-binding transcriptional regulator 3373 50.66 0 3750986..3752122 - 378 16131457 yiaV b3586 - membrane fusion protein (MFP) component of efflux pump, signal anchor 3374 46.60 0 3752128..3752451 - 107 16131458 yiaW b3587 - conserved inner membrane protein 3375 54.78 0 3752996..3754534 - 512 90111619 aldB b3588 - aldehyde dehydrogenase B 3376 50.52 0 3754699..3755850 - 383 49176377 yiaY b3589 - predicted Fe-containing alcohol dehydrogenase 3377 56.37 +1 3756040..3757884 - 614 16131461 selB b3590 - selenocysteinyl-tRNA-specific translation factor 3378 56.03 +1 3757881..3759272 - 463 16131462 selA b3591 - selenocysteine synthase 3379 52.71 0 3759370..3759978 - 202 16131463 yibF b3592 - predicted glutathione S-transferase 3380 59.53 +1 3760206..3764339 + 1377 16131464 rhsA b3593 - rhsA element core protein RshA 3381 33.69 -2 3764360..3765202 + 280 16131465 yibA b3594 - lyase containing HEAT-repeat 3382 32.25 -2 3766200..3766661 + 153 16131467 yibG b3596 - conserved protein 3383 36.31 -2 3767368..3767703 + 111 145698326 yibV b4615 - hypothetical protein, no homologs 3384 52.68 0 3768266..3769402 - 378 16131468 yibH b3597 - predicted protein 3385 51.52 0 3769405..3769767 - 120 16131469 yibI b3598 - predicted inner membrane protein 3386 53.87 0 3770304..3772217 + 637 16131470 mtlA b3599 - fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components 3387 52.39 0 3772447..3773595 + 382 16131471 mtlD b3600 - mannitol-1-phosphate dehydrogenase, NAD(P)-binding 3388 51.02 0 3773595..3774182 + 195 16131472 mtlR b3601 - DNA-binding repressor 3389 49.05 0 3774194..3774403 - 69 94541127 yibT b4554 - predicted protein 3390 50.96 0 3774688..3775050 + 120 16131473 yibL b3602 - conserved protein 3391 55.13 0 3775422..3777077 + 551 16131474 lldP b3603 - L-lactate permease 3392 54.05 0 3777077..3777853 + 258 16131475 lldR b3604 - DNA-binding transcriptional repressor 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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