version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3245 56.20 +1 3593500..3594426 - 308 16131329 livH b3457 - leucine/isoleucine/valine transporter subunit 3246 54.14 0 3594474..3595583 - 369 16131330 livK b3458 - leucine transporter subunit 3247 56.51 +1 3596007..3596390 + 127 16131331 yhhK b3459 - conserved protein 3248 54.44 0 3596578..3597681 - 367 49176358 livJ b3460 - leucine/isoleucine/valine transporter subunit 3249 54.15 0 3597952..3598806 - 284 16131333 rpoH b3461 - RNA polymerase, sigma 32 (sigma H) factor 3250 53.07 0 3599051..3600109 - 352 16131334 ftsX b3462 - predicted transporter subunit: membrane component of ABC superfamily 3251 56.35 +1 3600102..3600770 - 222 16131335 ftsE b3463 - predicted transporter subunit: ATP-binding component of ABC superfamily 3252 53.48 0 3600773..3602266 - 497 16131336 ftsY b3464 - fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein 3253 53.94 0 3602416..3603012 + 198 16131337 rsmD b3465 - predicted methyltransferase 3254 45.56 -1 3603002..3603271 + 89 16131338 yhhL b3466 - conserved inner membrane protein 3255 51.11 0 3603274..3603633 - 119 16131339 yhhM b3467 - conserved protein 3256 56.62 +1 3603774..3604400 + 208 16131340 yhhN b3468 - conserved inner membrane protein 3257 58.25 +1 3604474..3606672 + 732 16131341 zntA b3469 - zinc, cobalt and lead efflux system 3258 53.66 0 3606774..3607019 - 81 16131342 sirA b3470 - conserved protein required for cell growth 3259 50.75 0 3607240..3607905 + 221 16131343 yhhQ b3471 - conserved inner membrane protein 3260 52.15 0 3607978..3608535 + 185 90111595 dcrB b3472 - periplasmic protein 3261 56.73 +1 3608539..3609756 - 405 90111596 yhhS b3473 - predicted transporter 3262 51.43 0 3609888..3610937 + 349 90111597 yhhT b3474 - predicted inner membrane protein 3263 56.46 +1 3610992..3611579 + 195 16131347 acpT b3475 - holo-(acyl carrier protein) synthase 2 3264 53.33 0 3611690..3613264 + 524 16131348 nikA b3476 - nickel transporter subunit 3265 58.41 +1 3613264..3614208 + 314 16131349 nikB b3477 - nickel transporter subunit 3266 60.91 +2 3614205..3615038 + 277 16131350 nikC b3478 - nickel transporter subunit 3267 59.22 +1 3615038..3615802 + 254 16131351 nikD b3479 - nickel transporter subunit 3268 56.26 +1 3615799..3616605 + 268 16131352 nikE b3480 - nickel transporter subunit 3269 57.21 +1 3616611..3617012 + 133 16131353 nikR b3481 - DNA-binding transcriptional repressor, Ni-binding 3270 58.81 +1 3617215..3621450 + 1411 49176361 rhsB b3482 - rhsB element core protein RshB 3271 33.33 -2 3621422..3621805 + 127 90111598 yhhH b3483 - predicted protein 3272 41.51 -2 3622401..3623537 + 378 16131356 yhhI b3484 - predicted transposase 3273 54.61 0 3623702..3624829 - 375 145698319 yhhJ b3485 - predicted transporter subunit: membrane component of ABC superfamily 3274 56.73 +1 3624826..3627561 - 911 49176363 rbbA b3486 - fused ribosome-associated ATPase: ATP-binding protein/ATP-binding protein/predicted membrane protein 3275 58.24 +1 3627558..3628625 - 355 16131359 yhiI b3487 - predicted HlyD family secretion protein 3276 37.46 -2 3628991..3630613 - 540 16131360 yhiJ b3488 - predicted protein 3277 46.58 0 3632822..3633916 + 364 145698320 yhiM b3491 - conserved inner membrane protein 3278 55.11 0 3634231..3635433 - 400 16131364 yhiN b3492 - predicted oxidoreductase with FAD/NAD(P)-binding domain 3279 54.07 0 3635665..3637164 + 499 16131365 pitA b3493 - phosphate transporter, low-affinity 3280 47.02 0 3637408..3637743 - 111 16131366 uspB b3494 - predicted universal stress (ethanol tolerance) protein B 3281 49.20 0 3638134..3638568 + 144 16131367 uspA b3495 - universal stress global response regulator 3282 51.84 0 3638885..3640354 + 489 16131368 yhiP b3496 - predicted transporter 3283 58.17 +1 3640403..3641155 - 250 16131369 yhiQ b3497 - predicted SAM-dependent methyltransferase 3284 54.72 0 3641163..3643205 - 680 16131370 prlC b3498 - oligopeptidase A 3285 54.45 0 3643408..3644250 + 280 16131371 yhiR b3499 - predicted DNA (exogenous) processing protein 3286 53.81 0 3644322..3645674 + 450 16131372 gor b3500 - glutathione oxidoreductase 3287 47.29 0 3645728..3645856 - 42 145698321 dinQ b4613 - Damage inducible, function unknown 3288 50.85 0 3646551..3646904 + 117 16131373 arsR b3501 - DNA-binding transcriptional repressor 3289 53.95 0 3646958..3648247 + 429 90111602 arsB b3502 - arsenite/antimonite transporter 3290 51.88 0 3648260..3648685 + 141 16131375 arsC b3503 - arsenate reductase 3291 54.67 0 3650205..3651221 - 338 16131377 insH b3505 - IS5 transposase and trans-activator 3292 45.86 -1 3651984..3652550 + 188 90111603 slp b3506 - outer membrane lipoprotein 3293 39.74 -2 3652706..3653236 + 176 16131379 dctR b3507 - predicted DNA-binding ranscriptional regulator 3294 45.52 -1 3653278..3653925 - 215 16131380 yhiD b3508 - predicted Mg(2+) transport ATPase inner membrane protein 3295 40.06 -2 3653989..3654315 - 108 162135912 hdeB b3509 - acid-resistance protein 3296 42.94 -1 3654431..3654763 - 110 16131382 hdeA b3510 - stress response protein acid-resistance protein 3297 46.60 0 3655018..3655590 + 190 16131383 hdeD b3511 - acid-resistance membrane protein 3298 32.95 -2 3656389..3656916 + 175 16131384 gadE b3512 - DNA-binding transcriptional activator 3299 54.58 0 3657255..3658412 + 385 16131385 mdtE b3513 - multidrug resistance efflux transporter 3300 53.02 0 3658437..3661550 + 1037 16131386 mdtF b3514 - multidrug transporter, RpoS-dependent 3301 41.84 -1 3661913..3662641 - 242 16131387 gadW b3515 - DNA-binding transcriptional activator 3302 40.97 -2 3663009..3663833 - 274 16131388 gadX b3516 - DNA-binding transcriptional dual regulator 3303 53.96 0 3664203..3665603 - 466 16131389 gadA b3517 - glutamate decarboxylase A, PLP-dependent 3304 48.43 0 3665814..3667211 - 465 16131390 yhjA b3518 - predicted cytochrome C peroxidase 3305 53.94 0 3667615..3669264 + 549 16131391 treF b3519 - cytoplasmic trehalase 3306 47.76 0 3669315..3669917 - 200 16131392 yhjB b3520 - predicted DNA-binding response regulator in two-component regulatory system 3307 53.33 0 3670437..3671336 + 299 145698322 yhjC b3521 - predicted DNA-binding transcriptional regulator 3308 52.66 0 3671385..3672398 + 337 16131394 yhjD b3522 - conserved inner membrane protein 3309 55.63 0 3672809..3674131 + 440 16131395 yhjE b3523 - predicted transporter 3310 53.23 0 3674313..3676388 - 691 16131396 yhjG b3524 - predicted outer membrane biogenesis protein 3311 52.73 0 3676443..3677210 - 255 90111605 yhjH b3525 - EAL domain containing protein involved in flagellar function 3312 57.10 +1 3677442..3678371 + 309 90111606 kdgK b3526 - ketodeoxygluconokinase 3313 53.44 0 3678467..3679963 - 498 16131399 yhjJ b3527 - predicted zinc-dependent peptidase 3314 51.67 0 3680184..3681470 - 428 16131400 dctA b3528 - C4-dicarboxylic acid, orotate and citrate transporter 3315 52.61 0 3681653..3683608 - 651 145698323 yhjK b3529 - predicted diguanylate cyclase 3316 57.23 +1 3683723..3687145 - 1140 145698324 bcsC b3530 - cellulose synthase subunit 3317 54.74 0 3687178..3688284 - 368 16131403 bcsZ b3531 - endo-1,4-D-glucanase 3318 54.91 0 3688291..3690630 - 779 16131404 bcsB b3532 - regulator of cellulose synthase, cyclic di-GMP binding 3319 55.36 0 3690641..3693259 - 872 90111609 bcsA b3533 - cellulose synthase, catalytic subunit 3320 46.03 -1 3694020..3694208 - 62 16131407 yhjR b3535 - conserved protein 3321 48.85 0 3694481..3696052 + 523 16131408 bcsE b3536 - conserved protein 3322 48.44 0 3696049..3696240 + 63 90111610 bcsF b3537 - predicted protein 3323 52.68 0 3696237..3697916 + 559 16131410 bcsG b3538 - predicted inner membrane protein 3324 52.78 0 3698003..3698110 - 35 49176368 ldrD b4453 - toxic polypeptide, small 3325 45.44 -1 3698586..3699857 + 423 16131411 yhjV b3539 - predicted transporter 3326 56.12 +1 3699887..3700891 - 334 16131412 dppF b3540 - dipeptide transporter 3327 56.71 +1 3700888..3701871 - 327 16131413 dppD b3541 - dipeptide transporter 3328 59.03 +1 3701882..3702784 - 300 16131414 dppC b3542 - dipeptide transporter 3329 56.47 +1 3702794..3703813 - 339 16131415 dppB b3543 - dipeptide transporter 3330 51.55 0 3704121..3705728 - 535 16131416 dppA b3544 - dipeptide transporter 3331 50.41 0 3706807..3708498 - 563 90111611 eptB b3546 - predicted metal dependent hydrolase 3332 51.20 0 3708822..3710030 - 402 16131418 yhjX b3547 - predicted transporter 3333 50.21 0 3710259..3710957 - 232 90111612 yhjY b3548 - conserved protein 3334 49.82 0 3711115..3711678 + 187 16131420 tag b3549 - 3-methyl-adenine DNA glycosylase I, constitutive 3335 52.15 0 3711675..3712115 + 146 16131421 yiaC b3550 - predicted acyltransferase with acyl-CoA N-acyltransferase domain 3336 54.41 0 3712084..3714417 - 777 145698325 bisC b3551 - biotin sulfoxide reductase 3337 57.88 +1 3714570..3715229 + 219 49176370 yiaD b3552 - predicted outer membrane lipoprotein 3338 52.00 0 3715333..3716307 + 324 90111614 ghrB b3553 - 2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase) 3339 50.49 0 3716357..3717067 - 236 90111615 yiaF b3554 - conserved protein 3340 43.99 -1 3717501..3717791 + 96 16131426 yiaG b3555 - predicted transcriptional regulator 3341 48.36 0 3718072..3718284 + 70 16131427 cspA b3556 - major cold shock protein 3342 35.29 -2 3718471..3718623 - 50 49176371 hokA b4455 - toxic polypeptide, small 3343 46.17 -1 3718703..3719224 + 173 16131428 insJ b3557 - IS150 protein InsA 3344 42.84 -1 3719221..3720072 + 283 16131429 insK b3558 - IS150 conserved protein InsB 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0