version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3059 52.28 0 3408302..3409267 + 321 16131148 dusB b3260 - tRNA-dihydrouridine synthase B 3060 47.14 0 3409293..3409589 + 98 16131149 fis b3261 - global DNA-binding transcriptional dual regulator 3061 47.46 0 3409675..3410559 + 294 90111566 yhdJ b3262 - predicted methyltransferase 3062 40.56 -2 3410643..3410822 + 59 16131151 yhdU b3263 - predicted membrane protein 3063 44.19 -1 3410825..3411487 - 220 16131152 envR b3264 - DNA-binding transcriptional regulator 3064 52.07 0 3411886..3413043 + 385 16131153 acrE b3265 - cytoplasmic membrane lipoprotein 3065 51.53 0 3413055..3416159 + 1034 16131154 acrF b3266 - multidrug efflux system protein 3066 54.05 0 3416412..3416633 + 73 16131155 yhdV b3267 - predicted outer membrane protein 3067 50.25 0 3418156..3419337 + 393 49176333 yhdX b3269 - predicted amino-acid transporter subunit 3068 52.45 0 3419347..3420450 + 367 90111567 yhdY b3270 - predicted amino-acid transporter subunit 3069 47.04 0 3420458..3421216 + 252 16131159 yhdZ b3271 - predicted amino-acid transporter subunit 3070 48.83 0 3427258..3427812 + 184 90111568 yrdA b3279 - conserved protein 3071 49.22 0 3427788..3428045 - 85 16131161 yrdB b3280 - conserved protein 3072 48.96 0 3428042..3428860 - 272 16131162 aroE b3281 - dehydroshikimate reductase, NAD(P)-binding 3073 52.18 0 3428865..3429437 - 190 16131163 rimN b3282 - predicted ribosome maturation factor 3074 49.72 0 3429442..3429984 - 180 49176335 yrdD b3283 - predicted DNA topoisomerase 3075 45.99 -1 3430013..3430486 - 157 16131165 smg b3284 - conserved protein 3076 50.93 0 3430458..3431582 - 374 49176336 smf b4473 - conserved protein 3077 46.27 -1 3431712..3432221 + 169 16131166 def b3287 - peptide deformylase 3078 52.85 0 3432236..3433183 + 315 16131167 fmt b3288 - 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase 3079 49.69 0 3433229..3434518 + 429 16131168 rsmB b3289 - 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent 3080 50.11 0 3434540..3435916 + 458 16131169 trkA b3290 - NAD-binding component of TrK potassium transporter 3081 45.01 -1 3436046..3436456 + 136 16131170 mscL b3291 - mechanosensitive channel 3082 43.38 -1 3436453..3436671 - 72 94541124 yhdL b4550 - conserved protein 3083 48.83 0 3436727..3437152 - 141 16131171 zntR b3292 - DNA-binding transcriptional activator in response to Zn(II) 3084 47.97 0 3437163..3437531 - 122 16131172 yhdN b3293 - conserved protein 3085 53.65 0 3437638..3438021 - 127 16131173 rplQ b3294 - 50S ribosomal subunit protein L17 3086 52.22 0 3438062..3439051 - 329 16131174 rpoA b3295 - RNA polymerase, alpha subunit 3087 50.72 0 3439077..3439697 - 206 16131175 rpsD b3296 - 30S ribosomal subunit protein S4 3088 51.54 0 3439731..3440120 - 129 16131176 rpsK b3297 - 30S ribosomal subunit protein S11 3089 51.82 0 3440137..3440493 - 118 16131177 rpsM b3298 - 30S ribosomal subunit protein S13 3090 47.86 0 3440640..3440756 - 38 16131178 rpmJ b3299 - 50S ribosomal subunit protein L36 3091 49.70 0 3440788..3442119 - 443 16131179 secY b3300 - preprotein translocase membrane subunit 3092 53.56 0 3442127..3442561 - 144 16131180 rplO b3301 - 50S ribosomal subunit protein L15 3093 50.00 0 3442565..3442744 - 59 16131181 rpmD b3302 - 50S ribosomal subunit protein L30 3094 50.20 0 3442748..3443251 - 167 16131182 rpsE b3303 - 30S ribosomal subunit protein S5 3095 53.67 0 3443266..3443619 - 117 16131183 rplR b3304 - 50S ribosomal subunit protein L18 3096 52.06 0 3443629..3444162 - 177 16131184 rplF b3305 - 50S ribosomal subunit protein L6 3097 50.13 0 3444175..3444567 - 130 16131185 rpsH b3306 - 30S ribosomal subunit protein S8 3098 52.61 0 3444601..3444906 - 101 16131186 rpsN b3307 - 30S ribosomal subunit protein S14 3099 49.81 0 3444921..3445460 - 179 16131187 rplE b3308 - 50S ribosomal subunit protein L5 3100 46.03 -1 3445475..3445789 - 104 16131188 rplX b3309 - 50S ribosomal subunit protein L24 3101 51.08 0 3445800..3446171 - 123 16131189 rplN b3310 - 50S ribosomal subunit protein L14 3102 47.45 0 3446336..3446590 - 84 16131190 rpsQ b3311 - 30S ribosomal subunit protein S17 3103 54.17 0 3446590..3446781 - 63 16131191 rpmC b3312 - 50S ribosomal subunit protein L29 3104 51.82 0 3446781..3447191 - 136 16131192 rplP b3313 - 50S ribosomal subunit protein L16 3105 51.00 0 3447204..3447905 - 233 16131193 rpsC b3314 - 30S ribosomal subunit protein S3 3106 49.85 0 3447923..3448255 - 110 16131194 rplV b3315 - 50S ribosomal subunit protein L22 3107 48.75 0 3448270..3448548 - 92 16131195 rpsS b3316 - 30S ribosomal subunit protein S19 3108 52.68 0 3448565..3449386 - 273 16131196 rplB b3317 - 50S ribosomal subunit protein L2 3109 48.18 0 3449404..3449706 - 100 16131197 rplW b3318 - 50S ribosomal subunit protein L23 3110 52.97 0 3449703..3450308 - 201 16131198 rplD b3319 - 50S ribosomal subunit protein L4 3111 51.43 0 3450319..3450948 - 209 16131199 rplC b3320 - 50S ribosomal subunit protein L3 3112 55.45 0 3450981..3451292 - 103 16131200 rpsJ b3321 - 30S ribosomal subunit protein S10 3113 45.95 -1 3451530..3451949 - 139 16131201 gspB b3322 - part of gsp divergon involved in type II protein secretion 3114 48.98 0 3451951..3453420 - 489 16131202 gspA b3323 - general secretory pathway component, cryptic 3115 42.40 -1 3453600..3454415 + 271 16131203 gspC b3324 - general secretory pathway component, cryptic 3116 50.18 0 3454399..3456351 + 650 90111569 gspD b3325 - general secretory pathway component, cryptic 3117 52.50 0 3456361..3457842 + 493 16131205 gspE b3326 - general secretory pathway component, cryptic 3118 51.04 0 3457839..3459035 + 398 16131206 gspF b3327 - general secretory pathway component, cryptic 3119 48.63 0 3459045..3459482 + 145 16131207 gspG b3328 - pseudopilin, cryptic, general secretion pathway 3120 56.08 +1 3459490..3459999 + 169 16131208 gspH b3329 - predicted general secretory pathway component, cryptic 3121 47.88 0 3459996..3460373 + 125 90111570 gspI b3330 - general secretory pathway component, cryptic 3122 50.34 0 3460366..3460953 + 195 16131210 gspJ b3331 - predicted general secretory pathway component, cryptic 3123 50.20 0 3460946..3461929 + 327 16131211 gspK b3332 - general secretory pathway component, cryptic 3124 48.63 0 3461944..3463107 + 387 90111571 gspL b3333 - general secretory pathway component, cryptic 3125 47.84 0 3463104..3463565 + 153 90111572 gspM b3334 - general secretory pathway component, cryptic 3126 50.44 0 3463565..3464242 + 225 16131214 gspO b3335 - bifunctional prepilin leader peptidase/ methylase 3127 43.19 -1 3464271..3464747 - 158 16131215 bfr b3336 - bacterioferritin, iron storage and detoxification protein 3128 46.15 -1 3464819..3465013 - 64 16131216 bfd b3337 - bacterioferritin-associated ferredoxin 3129 50.37 0 3465182..3467875 - 897 16131217 chiA b3338 - periplasmic endochitinase 3130 53.25 0 3468167..3469351 - 394 16131218 tufA b3339 - protein chain elongation factor EF-Tu (duplicate of tufB) 3131 50.83 0 3469422..3471536 - 704 16131219 fusA b3340 - protein chain elongation factor EF-G, GTP-binding 3132 50.19 0 3471564..3472103 - 179 16131220 rpsG b3341 - 30S ribosomal subunit protein S7 3133 53.33 0 3472200..3472574 - 124 16131221 rpsL b3342 - 30S ribosomal subunit protein S12 3134 50.35 0 3472700..3472987 - 95 16131222 yheL b3343 - predicted intracellular sulfur oxidation protein 3135 50.28 0 3472995..3473354 - 119 16131223 yheM b3344 - predicted intraceullular sulfur oxidation protein 3136 55.30 0 3473354..3473740 - 128 16131224 yheN b3345 - predicted intracellular sulfur oxidation protein 3137 47.30 0 3473740..3474462 - 240 90111573 yheO b3346 - predicted DNA-binding transcriptional regulator 3138 48.22 0 3474629..3475441 - 270 16131226 fkpA b3347 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 3139 52.97 0 3475662..3475880 + 72 16131227 slyX b3348 - conserved protein 3140 55.33 0 3475929..3476519 - 196 16131228 slyD b3349 - FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 3141 48.26 0 3476614..3476814 - 66 94541125 yheV b4551 - predicted protein 3142 54.76 0 3476824..3478629 - 601 16131229 kefB b3350 - potassium:proton antiporter 3143 56.58 +1 3478629..3479183 - 184 16131230 kefG b3351 - component of potassium effux complex with KefB 3144 55.33 0 3479311..3481224 + 637 16131231 yheS b3352 - fused predicted transporter subunits of ABC superfamily: ATP-binding components 3145 54.25 0 3481224..3482246 + 340 16131232 yheT b3353 - predicted hydrolase 3146 49.77 0 3482240..3482458 + 72 16131233 yheU b3354 - conserved protein 3147 53.22 0 3482512..3483381 + 289 16131234 prkB b3355 - predicted phosphoribulokinase 3148 51.60 0 3483436..3483840 - 134 16131235 yhfA b3356 - conserved protein 3149 49.45 0 3484142..3484774 + 210 16131236 crp b3357 - DNA-binding transcriptional dual regulator 3150 52.78 0 3484813..3486915 + 700 90111574 yhfK b3358 - conserved inner membrane protein 3151 54.55 0 3486982..3488202 - 406 16131238 argD b3359 - bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase 3152 53.37 0 3488288..3488851 - 187 16131239 pabA b3360 - aminodeoxychorismate synthase, subunit II 3153 53.07 0 3488883..3489485 - 200 16131240 fic b3361 - stationary-phase protein, cell division 3154 51.19 0 3489475..3489642 - 55 16131241 yhfG b3362 - predicted protein 3155 51.13 0 3489747..3490319 - 190 16131242 ppiA b3363 - peptidyl-prolyl cis-trans isomerase A (rotamase A) 3156 51.86 0 3490590..3491771 + 393 16131243 tsgA b3364 - predicted transporter 3157 54.28 0 3492033..3494576 + 847 16131244 nirB b3365 - nitrite reductase, large subunit, NAD(P)H-binding 3158 55.96 +1 3494573..3494899 + 108 16131245 nirD b3366 - nitrite reductase, NAD(P)H-binding, small subunit 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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