version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3022 47.31 0 3367036..3367500 - 154 16131111 yhcH b3221 - conserved protein 3023 58.45 +1 3367497..3368372 - 291 90111558 nanK b3222 - predicted N-acetylmannosamine kinase 3024 58.26 +1 3368369..3369058 - 229 16131113 nanE b3223 - predicted N-acetylmannosamine-6-P epimerase 3025 55.06 0 3369106..3370596 - 496 90111559 nanT b3224 - sialic acid transporter 3026 52.01 0 3370705..3371598 - 297 16131115 nanA b3225 - N-acetylneuraminate lyase 3027 52.27 0 3371720..3372511 - 263 49176329 nanR b3226 - DNA-binding transcriptional dual regulator 3028 51.02 0 3372891..3374258 + 455 16131117 dcuD b3227 - predicted transporter 3029 55.22 0 3374301..3374798 - 165 16131118 sspB b3228 - ClpXP protease specificity-enhancing factor 3030 53.68 0 3374804..3375442 - 212 16131119 sspA b3229 - stringent starvation protein A 3031 52.42 0 3375837..3376229 - 130 16131120 rpsI b3230 - 30S ribosomal subunit protein S9 3032 50.58 0 3376245..3376673 - 142 16131121 rplM b3231 - 50S ribosomal subunit protein L13 3033 51.77 0 3376892..3378019 - 375 16131122 yhcM b3232 - conserved protein with nucleoside triphosphate hydrolase domain 3034 54.39 0 3378213..3378611 + 132 90111560 yhcB b3233 - conserved protein 3035 52.05 0 3378765..3380132 + 455 16131124 degQ b3234 - serine endoprotease, periplasmic 3036 52.72 0 3380222..3381289 + 355 16131125 degS b3235 - serine endoprotease, periplasmic 3037 52.29 0 3381352..3382290 - 312 16131126 mdh b3236 - malate dehydrogenase, NAD(P)-binding 3038 48.62 0 3382725..3383195 + 156 16131127 argR b3237 - DNA-binding transcriptional dual regulator, L-arginine-binding 3039 48.48 0 3383560..3383823 + 87 90111561 yhcN b3238 - conserved protein 3040 42.86 -1 3383879..3384151 - 90 16131129 yhcO b3239 - predicted barnase inhibitor 3041 52.59 0 3384243..3386210 - 655 16131130 aaeB b3240 - p-hydroxybenzoic acid efflux system component 3042 53.59 0 3386216..3387148 - 310 16131131 aaeA b3241 - p-hydroxybenzoic acid efflux system component 3043 47.55 0 3387156..3387359 - 67 90111562 aaeX b3242 - membrane protein of efflux system 3044 52.90 0 3387542..3388471 + 309 16131133 aaeR b3243 - predicted DNA-binding transcriptional regulator, efflux system 3045 54.56 0 3388605..3390050 - 481 16131134 tldD b3244 - predicted peptidase 3046 53.35 0 3390480..3394280 - 1266 49176330 yhdP b4472 - conserved membrane protein, predicted transporter 3047 52.11 0 3394348..3395817 - 489 90111563 rng b3247 - ribonuclease G 3048 53.70 0 3395807..3396400 - 197 16131136 yhdE b3248 - conserved protein 3049 51.33 0 3396409..3396897 - 162 16131137 mreD b3249 - cell wall structural complex MreBCD transmembrane component MreD 3050 55.98 +1 3396897..3398000 - 367 16131138 mreC b3250 - cell wall structural complex MreBCD transmembrane component MreC 3051 54.31 0 3398066..3399109 - 347 90111564 mreB b3251 - cell wall structural complex MreBCD, actin-like component MreB 3052 50.70 0 3399414..3401354 - 646 16131140 csrD b3252 - conserved inner membrane protein 3053 55.38 0 3401506..3402480 + 324 16131141 yhdH b3253 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 3054 51.80 0 3403458..3403928 + 156 16131143 accB b3255 - acetyl CoA carboxylase, BCCP subunit 3055 53.41 0 3403939..3405288 + 449 16131144 accC b3256 - acetyl-CoA carboxylase, biotin carboxylase subunit 3056 54.32 0 3405397..3405639 + 80 16131145 yhdT b3257 - conserved inner membrane protein 3057 54.34 0 3405629..3407080 + 483 90111565 panF b3258 - pantothenate:sodium symporter 3058 54.31 0 3407092..3407973 + 293 16131147 prmA b3259 - methylase for 50S ribosomal subunit protein L11 3059 52.28 0 3408302..3409267 + 321 16131148 dusB b3260 - tRNA-dihydrouridine synthase B 3060 47.14 0 3409293..3409589 + 98 16131149 fis b3261 - global DNA-binding transcriptional dual regulator 3061 47.46 0 3409675..3410559 + 294 90111566 yhdJ b3262 - predicted methyltransferase 3062 40.56 -2 3410643..3410822 + 59 16131151 yhdU b3263 - predicted membrane protein 3063 44.19 -1 3410825..3411487 - 220 16131152 envR b3264 - DNA-binding transcriptional regulator 3064 52.07 0 3411886..3413043 + 385 16131153 acrE b3265 - cytoplasmic membrane lipoprotein 3065 51.53 0 3413055..3416159 + 1034 16131154 acrF b3266 - multidrug efflux system protein 3066 54.05 0 3416412..3416633 + 73 16131155 yhdV b3267 - predicted outer membrane protein 3067 50.25 0 3418156..3419337 + 393 49176333 yhdX b3269 - predicted amino-acid transporter subunit 3068 52.45 0 3419347..3420450 + 367 90111567 yhdY b3270 - predicted amino-acid transporter subunit 3069 47.04 0 3420458..3421216 + 252 16131159 yhdZ b3271 - predicted amino-acid transporter subunit 3070 48.83 0 3427258..3427812 + 184 90111568 yrdA b3279 - conserved protein 3071 49.22 0 3427788..3428045 - 85 16131161 yrdB b3280 - conserved protein 3072 48.96 0 3428042..3428860 - 272 16131162 aroE b3281 - dehydroshikimate reductase, NAD(P)-binding 3073 52.18 0 3428865..3429437 - 190 16131163 rimN b3282 - predicted ribosome maturation factor 3074 49.72 0 3429442..3429984 - 180 49176335 yrdD b3283 - predicted DNA topoisomerase 3075 45.99 -1 3430013..3430486 - 157 16131165 smg b3284 - conserved protein 3076 50.93 0 3430458..3431582 - 374 49176336 smf b4473 - conserved protein 3077 46.27 -1 3431712..3432221 + 169 16131166 def b3287 - peptide deformylase 3078 52.85 0 3432236..3433183 + 315 16131167 fmt b3288 - 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase 3079 49.69 0 3433229..3434518 + 429 16131168 rsmB b3289 - 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent 3080 50.11 0 3434540..3435916 + 458 16131169 trkA b3290 - NAD-binding component of TrK potassium transporter 3081 45.01 -1 3436046..3436456 + 136 16131170 mscL b3291 - mechanosensitive channel 3082 43.38 -1 3436453..3436671 - 72 94541124 yhdL b4550 - conserved protein 3083 48.83 0 3436727..3437152 - 141 16131171 zntR b3292 - DNA-binding transcriptional activator in response to Zn(II) 3084 47.97 0 3437163..3437531 - 122 16131172 yhdN b3293 - conserved protein 3085 53.65 0 3437638..3438021 - 127 16131173 rplQ b3294 - 50S ribosomal subunit protein L17 3086 52.22 0 3438062..3439051 - 329 16131174 rpoA b3295 - RNA polymerase, alpha subunit 3087 50.72 0 3439077..3439697 - 206 16131175 rpsD b3296 - 30S ribosomal subunit protein S4 3088 51.54 0 3439731..3440120 - 129 16131176 rpsK b3297 - 30S ribosomal subunit protein S11 3089 51.82 0 3440137..3440493 - 118 16131177 rpsM b3298 - 30S ribosomal subunit protein S13 3090 47.86 0 3440640..3440756 - 38 16131178 rpmJ b3299 - 50S ribosomal subunit protein L36 3091 49.70 0 3440788..3442119 - 443 16131179 secY b3300 - preprotein translocase membrane subunit 3092 53.56 0 3442127..3442561 - 144 16131180 rplO b3301 - 50S ribosomal subunit protein L15 3093 50.00 0 3442565..3442744 - 59 16131181 rpmD b3302 - 50S ribosomal subunit protein L30 3094 50.20 0 3442748..3443251 - 167 16131182 rpsE b3303 - 30S ribosomal subunit protein S5 3095 53.67 0 3443266..3443619 - 117 16131183 rplR b3304 - 50S ribosomal subunit protein L18 3096 52.06 0 3443629..3444162 - 177 16131184 rplF b3305 - 50S ribosomal subunit protein L6 3097 50.13 0 3444175..3444567 - 130 16131185 rpsH b3306 - 30S ribosomal subunit protein S8 3098 52.61 0 3444601..3444906 - 101 16131186 rpsN b3307 - 30S ribosomal subunit protein S14 3099 49.81 0 3444921..3445460 - 179 16131187 rplE b3308 - 50S ribosomal subunit protein L5 3100 46.03 -1 3445475..3445789 - 104 16131188 rplX b3309 - 50S ribosomal subunit protein L24 3101 51.08 0 3445800..3446171 - 123 16131189 rplN b3310 - 50S ribosomal subunit protein L14 3102 47.45 0 3446336..3446590 - 84 16131190 rpsQ b3311 - 30S ribosomal subunit protein S17 3103 54.17 0 3446590..3446781 - 63 16131191 rpmC b3312 - 50S ribosomal subunit protein L29 3104 51.82 0 3446781..3447191 - 136 16131192 rplP b3313 - 50S ribosomal subunit protein L16 3105 51.00 0 3447204..3447905 - 233 16131193 rpsC b3314 - 30S ribosomal subunit protein S3 3106 49.85 0 3447923..3448255 - 110 16131194 rplV b3315 - 50S ribosomal subunit protein L22 3107 48.75 0 3448270..3448548 - 92 16131195 rpsS b3316 - 30S ribosomal subunit protein S19 3108 52.68 0 3448565..3449386 - 273 16131196 rplB b3317 - 50S ribosomal subunit protein L2 3109 48.18 0 3449404..3449706 - 100 16131197 rplW b3318 - 50S ribosomal subunit protein L23 3110 52.97 0 3449703..3450308 - 201 16131198 rplD b3319 - 50S ribosomal subunit protein L4 3111 51.43 0 3450319..3450948 - 209 16131199 rplC b3320 - 50S ribosomal subunit protein L3 3112 55.45 0 3450981..3451292 - 103 16131200 rpsJ b3321 - 30S ribosomal subunit protein S10 3113 45.95 -1 3451530..3451949 - 139 16131201 gspB b3322 - part of gsp divergon involved in type II protein secretion 3114 48.98 0 3451951..3453420 - 489 16131202 gspA b3323 - general secretory pathway component, cryptic 3115 42.40 -1 3453600..3454415 + 271 16131203 gspC b3324 - general secretory pathway component, cryptic 3116 50.18 0 3454399..3456351 + 650 90111569 gspD b3325 - general secretory pathway component, cryptic 3117 52.50 0 3456361..3457842 + 493 16131205 gspE b3326 - general secretory pathway component, cryptic 3118 51.04 0 3457839..3459035 + 398 16131206 gspF b3327 - general secretory pathway component, cryptic 3119 48.63 0 3459045..3459482 + 145 16131207 gspG b3328 - pseudopilin, cryptic, general secretion pathway 3120 56.08 +1 3459490..3459999 + 169 16131208 gspH b3329 - predicted general secretory pathway component, cryptic 3121 47.88 0 3459996..3460373 + 125 90111570 gspI b3330 - general secretory pathway component, cryptic 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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