version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2535 49.46 0 2816983..2817168 - 61 16130603 csrA b2696 - pleiotropic regulatory protein for carbon source metabolism 2536 53.63 0 2817403..2820033 - 876 16130604 alaS b2697 - alanyl-tRNA synthetase 2537 51.90 0 2820161..2820661 - 166 16130605 recX b2698 - regulatory protein for RecA 2538 54.14 0 2820730..2821791 - 353 16130606 recA b2699 - DNA strand exchange and recombination protein with protease and nuclease activity 2539 56.63 +1 2821871..2822368 - 165 16130607 ygaD b2700 - conserved protein 2540 55.16 0 2822513..2823598 - 361 16130608 mltB b2701 - membrane-bound lytic murein transglycosylase B 2541 50.18 0 2823854..2824417 + 187 49176260 srlA b2702 - glucitol/sorbitol-specific enzyme IIC component of PTS 2542 54.69 0 2824414..2825373 + 319 49176261 srlE b2703 - glucitol/sorbitol-specific enzyme IIB component of PTS 2543 55.11 0 2825384..2825755 + 123 16130611 srlB b2704 - glucitol/sorbitol-specific enzyme IIA component of PTS 2544 53.33 0 2825759..2826538 + 259 16130612 srlD b2705 - sorbitol-6-phosphate dehydrogenase 2545 55.00 0 2826643..2827002 + 119 16130613 gutM b2706 - DNA-binding transcriptional activator of glucitol operon 2546 48.84 0 2827069..2827842 + 257 16130614 srlR b2707 - DNA-bindng transcriptional repressor 2547 57.35 +1 2827835..2828800 + 321 90111480 gutQ b2708 - predicted phosphosugar-binding protein 2548 56.83 +1 2828797..2830311 - 504 90111481 norR b2709 - DNA-binding transcriptional activator 2549 53.33 0 2830498..2831937 + 479 16130617 norV b2710 - flavorubredoxin oxidoreductase 2550 54.06 0 2831934..2833067 + 377 16130618 norW b2711 - NADH:flavorubredoxin oxidoreductase 2551 57.61 +1 2833195..2835447 - 750 16130619 hypF b2712 - carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases 2552 52.27 0 2835600..2836127 - 175 16130620 hydN b2713 - formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit 2553 53.16 0 2836276..2837289 - 337 16130621 ascG b2714 - DNA-binding transcriptional repressor 2554 56.10 +1 2837546..2839003 + 485 49176263 ascF b2715 - fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component 2555 51.51 0 2839012..2840436 + 474 16130623 ascB b2716 - cryptic 6-phospho-beta-glucosidase 2556 53.93 0 2840595..2841065 - 156 16130624 hycI b2717 - protease involved in processing C-terminal end of HycE 2557 52.80 0 2841058..2841468 - 136 16130625 hycH b2718 - protein required for maturation of hydrogenase 3 2558 56.38 +1 2841465..2842232 - 255 16130626 hycG b2719 - hydrogenase 3 and formate hydrogenase complex, HycG subunit 2559 55.62 0 2842232..2842774 - 180 16130627 hycF b2720 - formate hydrogenlyase complex iron-sulfur protein 2560 56.90 +1 2842784..2844493 - 569 16130628 hycE b2721 - hydrogenase 3, large subunit 2561 58.44 +1 2844511..2845434 - 307 16130629 hycD b2722 - hydrogenase 3, membrane subunit 2562 58.18 +1 2845437..2847263 - 608 16130630 hycC b2723 - hydrogenase 3, membrane subunit 2563 57.35 +1 2847260..2847871 - 203 16130631 hycB b2724 - hydrogenase 3, Fe-S subunit 2564 50.22 0 2847996..2848457 - 153 16130632 hycA b2725 - regulator of the transcriptional regulator FhlA 2565 52.99 0 2848669..2849019 + 116 16130633 hypA b2726 - protein involved in nickel insertion into hydrogenases 3 2566 55.21 0 2849023..2849895 + 290 16130634 hypB b2727 - GTP hydrolase involved in nickel liganding into hydrogenases 2567 55.31 0 2849886..2850158 + 90 16130635 hypC b2728 - protein required for maturation of hydrogenases 1 and 3 2568 55.44 0 2850158..2851279 + 373 16130636 hypD b2729 - protein required for maturation of hydrogenases 2569 57.07 +1 2851318..2852286 + 322 16130637 hypE b2730 - carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein 2570 52.57 0 2852360..2854438 + 692 16130638 fhlA b2731 - DNA-binding transcriptional activator 2571 50.56 0 2854475..2854828 - 117 16130639 ygbA b2732 - predicted protein 2572 56.13 +1 2855115..2857676 + 853 16130640 mutS b2733 - methyl-directed mismatch repair protein 2573 42.31 -1 2857782..2858438 + 218 16130641 pphB b2734 - serine/threonine-specific protein phosphatase 2 2574 51.38 0 2858489..2859286 - 265 16130642 ygbI b2735 - predicted DNA-binding transcriptional regulator 2575 53.03 0 2859452..2860360 + 302 16130643 ygbJ b2736 - predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain 2576 55.10 0 2860357..2861523 + 388 16130644 ygbK b2737 - conserved protein 2577 53.52 0 2861615..2862253 + 212 16130645 ygbL b2738 - predicted class II aldolase 2578 51.48 0 2862258..2863034 + 258 16130646 ygbM b2739 - conserved protein 2579 51.72 0 2863123..2864487 + 454 16130647 ygbN b2740 - predicted transporter 2580 52.06 0 2864581..2865573 - 330 16130648 rpoS b2741 - RNA polymerase, sigma S (sigma 38) factor 2581 52.46 0 2865636..2866775 - 379 16130649 nlpD b2742 - predicted outer membrane lipoprotein 2582 53.43 0 2866915..2867541 - 208 16130650 pcm b2743 - L-isoaspartate protein carboxylmethyltransferase type II 2583 54.72 0 2867535..2868296 - 253 16130651 surE b2744 - broad specificity 5'(3')-nucleotidase and polyphosphatase 2584 52.19 0 2868277..2869326 - 349 16130652 truD b2745 - pseudoruidine synthase 2585 53.75 0 2869323..2869802 - 159 16130653 ispF b2746 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2586 55.41 0 2869802..2870512 - 236 16130654 ispD b2747 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 2587 51.92 0 2870531..2870842 - 103 16130655 ftsB b2748 - cell division protein 2588 48.15 0 2871036..2871359 - 107 16130656 ygbE b2749 - conserved inner membrane protein 2589 52.48 0 2871409..2872014 - 201 16130657 cysC b2750 - adenosine 5'-phosphosulfate kinase 2590 54.62 0 2872014..2873441 - 475 16130658 cysN b2751 - sulfate adenylyltransferase, subunit 1 2591 53.03 0 2873443..2874351 - 302 16130659 cysD b2752 - sulfate adenylyltransferase, subunit 2 2592 49.33 0 2874603..2875640 + 345 16130660 iap b2753 - aminopeptidase in alkaline phosphatase isozyme conversion 2593 46.32 -1 2876591..2876875 - 94 90111482 ygbF b2754 - predicted protein 2594 51.31 0 2876877..2877794 - 305 16130662 ygbT b2755 - conserved protein 2595 45.33 -1 2877810..2878409 - 199 16130663 ygcH b2756 - predicted protein 2596 48.15 0 2878396..2879070 - 224 90111483 ygcI b2757 - predicted protein 2597 43.50 -1 2879073..2880164 - 363 16130665 ygcJ b2758 - predicted protein 2598 46.38 -1 2880177..2880659 - 160 16130666 ygcK b2759 - predicted protein 2599 43.80 -1 2880652..2882160 - 502 16130667 ygcL b2760 - predicted protein 2600 44.69 -1 2882575..2885241 - 888 16130668 ygcB b2761 - conserved protein, member of DEAD box family 2601 50.75 0 2885600..2886334 - 244 16130669 cysH b2762 - 3'-phosphoadenosine 5'-phosphosulfate reductase 2602 56.04 +1 2886409..2888121 - 570 16130670 cysI b2763 - sulfite reductase, beta subunit, NAD(P)-binding, heme-binding 2603 56.06 +1 2888121..2889920 - 599 16130671 cysJ b2764 - sulfite reductase, alpha subunit, flavoprotein 2604 49.45 0 2890236..2890601 + 121 16130672 sscR b2765 - 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 2605 55.35 0 2890679..2891950 + 423 90111484 ygcN b2766 - predicted oxidoreductase with FAD/NAD(P)-binding domain 2606 55.17 0 2891941..2892201 + 86 90111485 ygcO b2767 - predicted 4Fe-4S cluster-containing protein 2607 46.53 0 2892218..2892793 + 191 16130675 ygcP b2768 - predicted anti-terminator regulatory protein 2608 55.63 0 2892941..2893801 - 286 90111486 ygcQ b2769 - predicted flavoprotein 2609 55.64 0 2893798..2894577 - 259 90111487 ygcR b2770 - predicted flavoprotein 2610 53.21 0 2894555..2895892 - 445 90111488 ygcS b2771 - predicted transporter 2611 50.52 0 2895986..2897440 - 484 49176267 ygcU b4463 - predicted FAD containing dehydrogenase 2612 45.67 -1 2897510..2898295 - 261 90111489 ygcW b2774 - predicted deoxygluconate dehydrogenase 2613 49.69 0 2898614..2899891 + 425 16130682 yqcE b2775 - predicted transporter 2614 49.02 0 2899918..2901396 + 492 16130683 ygcE b2776 - predicted kinase 2615 51.64 0 2902769..2903440 - 223 16130684 ygcF b2777 - conserved protein 2616 41.12 -2 2903733..2904605 + 290 90111490 ygcG b2778 - predicted protein 2617 50.35 0 2904665..2905963 - 432 16130686 eno b2779 - enolase 2618 51.89 0 2906051..2907688 - 545 16130687 pyrG b2780 - CTP synthetase 2619 50.76 0 2907916..2908707 - 263 16130688 mazG b2781 - nucleoside triphosphate pyrophosphohydrolase 2620 46.13 -1 2908778..2909113 - 111 16130689 chpA b2782 - toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease 2621 48.59 0 2909113..2909361 - 82 16130690 chpR b2783 - antitoxin of the ChpA-ChpR toxin-antitoxin system 2622 53.78 0 2909439..2911673 - 744 16130691 relA b2784 - (p)ppGpp synthetase I/GTP pyrophosphokinase 2623 51.46 0 2911721..2913022 - 433 16130692 rumA b2785 - 23S rRNA (uracil-5)-methyltransferase 2624 49.84 0 2913079..2915835 + 918 16130693 barA b2786 - hybrid sensory histidine kinase, in two-component regulatory system with UvrY 2625 53.24 0 2916067..2917407 - 446 16130694 gudD b2787 - (D)-glucarate dehydratase 1 2626 53.99 0 2917428..2918768 - 446 16130695 gudX b2788 - predicted glucarate dehydratase 2627 52.25 0 2918770..2920122 - 450 16130696 gudP b2789 - predicted D-glucarate transporter 2628 52.67 0 2920557..2921006 - 149 16130697 yqcA b2790 - predicted flavoprotein 2629 54.02 0 2921024..2921806 - 260 16130698 truC b2791 - tRNA pseudouridine synthase 2630 52.42 0 2921806..2922135 - 109 16130699 yqcC b2792 - conserved protein 2631 47.80 0 2922757..2923302 - 181 16130700 syd b2793 - predicted protein 2632 48.88 0 2923370..2924218 + 282 16130701 queF b2794 - 7-cyano-7-deazaguanine reductase (NADPH-dependent) 2633 51.36 0 2924330..2925694 + 454 16130702 ygdH b2795 - conserved protein 2634 52.33 0 2926251..2927540 + 429 16130703 sdaC b2796 - predicted serine transporter 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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