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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2438 50.78 0 2705820..2706776 - 318 16130496 rseB b2571 - anti-sigma factor 2439 52.23 0 2706776..2707426 - 216 16130497 rseA b2572 - anti-sigma factor 2440 48.78 0 2707459..2708034 - 191 16130498 rpoE b2573 - RNA polymerase, sigma 24 (sigma E) factor 2441 53.17 0 2708442..2710064 + 540 16130499 nadB b2574 - quinolinate synthase, L-aspartate oxidase (B protein) subunit 2442 52.44 0 2710049..2710786 - 245 90111461 yfiC b2575 - predicted S-adenosyl-L-methionine-dependent methyltransferase 2443 54.76 0 2710918..2712252 + 444 16130501 srmB b2576 - ATP-dependent RNA helicase 2444 49.66 0 2712461..2713342 - 293 90111462 yfiE b2577 - predicted DNA-binding transcriptional regulator 2445 51.19 0 2713445..2714032 + 195 16130503 eamB b2578 - neutral amino-acid efflux system 2446 47.92 0 2714088..2714471 - 127 16130504 yfiD b2579 - pyruvate formate lyase subunit 2447 52.17 0 2714776..2715465 + 229 16130505 ung b2580 - uracil-DNA-glycosylase 2448 56.26 +1 2715513..2716550 - 345 16130506 yfiF b2581 - predicted methyltransferase 2449 49.52 0 2716757..2717176 + 139 16130507 trxC b2582 - thioredoxin 2 2450 52.36 0 2717245..2717943 + 232 90111463 yfiP b2583 - conserved protein 2451 54.30 0 2717975..2720635 + 886 16130509 yfiQ b2584 - fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit 2452 48.89 0 2720749..2722104 + 451 90111464 pssA b2585 - phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) 2453 53.70 0 2722150..2722473 + 107 145698302 yfiM b2586 - predicted protein 2454 48.73 0 2722470..2723768 - 432 16130512 kgtP b2587 - alpha-ketoglutarate transporter 2455 51.44 0 2729622..2732195 - 857 16130513 clpB b2592 - protein disaggregation chaperone 2456 54.78 0 2732325..2733056 - 243 16130514 yfiH b2593 - conserved protein 2457 52.80 0 2733053..2734033 - 326 16130515 rluD b2594 - 23S rRNA pseudouridine synthase 2458 51.22 0 2734168..2734905 + 245 16130516 bamD b2595 - predicted lipoprotein 2459 46.20 -1 2735176..2735517 + 113 16130518 raiA b2597 - cold shock protein associated with 30S ribosomal subunit 2460 37.50 -2 2735621..2735668 + 15 16130519 pheL b2598 - pheA gene leader peptide 2461 49.18 0 2735767..2736927 + 386 16130520 pheA b2599 - fused chorismate mutase P/prephenate dehydratase 2462 52.32 0 2736970..2738091 - 373 16130521 tyrA b2600 - fused chorismate mutase T/prephenate dehydrogenase 2463 51.82 0 2738102..2739172 - 356 16130522 aroF b2601 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible 2464 45.63 -1 2739382..2739747 + 121 90111465 yfiL b2602 - predicted protein 2465 45.66 -1 2739897..2740415 + 172 16130524 yfiR b2603 - predicted protein 2466 48.33 0 2740405..2741631 + 408 16130525 yfiN b2604 - predicted diguanylate cyclase 2467 51.14 0 2741647..2742129 + 160 16130526 yfiB b2605 - predicted outer membrane lipoprotein 2468 48.28 0 2742205..2742552 - 115 16130527 rplS b2606 - 50S ribosomal subunit protein L19 2469 53.39 0 2742594..2743361 - 255 16130528 trmD b2607 - tRNA (guanine-1-)-methyltransferase 2470 49.00 0 2743392..2743940 - 182 90111466 rimM b2608 - 16S rRNA processing protein 2471 51.41 0 2743959..2744207 - 82 16130530 rpsP b2609 - 30S ribosomal subunit protein S16 2472 54.19 0 2744456..2745817 - 453 16130531 ffh b2610 - Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) 2473 52.65 0 2745984..2746775 + 263 145698303 ypjD b2611 - predicted inner membrane protein 2474 51.13 0 2746796..2748082 + 428 145698304 yfjD b4461 - predicted inner membrane protein 2475 50.34 0 2748137..2748730 - 197 16130533 grpE b2614 - heat shock protein 2476 49.94 0 2748853..2749731 + 292 16130534 nadK b2615 - NAD kinase 2477 51.81 0 2749817..2751478 + 553 49176247 recN b2616 - recombination and repair protein 2478 49.42 0 2751627..2751968 + 113 90111468 smpA b2617 - small membrane lipoprotein 2479 50.86 0 2752030..2752320 - 96 90111469 yfjF b2618 - predicted protein 2480 47.17 0 2752310..2752786 - 158 16130538 yfjG b2619 - conserved protein 2481 51.76 0 2752918..2753400 + 160 16130539 smpB b2620 - trans-translation protein 2482 47.58 0 2754181..2755422 + 413 16130540 intA b2622 - CP4-57 prophage; integrase 2483 36.78 -2 2755666..2756622 - 318 16130541 yfjH b2623 - CP4-57 prophage; predicted protein 2484 46.95 0 2756666..2756878 + 70 16130542 alpA b2624 - CP4-57 prophage; DNA-binding transcriptional activator 2485 37.94 -2 2757007..2758416 + 469 16130543 yfjI b2625 - CP4-57 prophage; predicted protein 2486 40.35 -2 2758569..2759195 + 208 16130544 yfjJ b2626 - CP4-57 prophage; predicted protein 2487 48.90 0 2759373..2761562 - 729 16130545 yfjK b2627 - CP4-57 prophage; conserved protein 2488 48.67 0 2761559..2763175 - 538 16130546 yfjL b2628 - CP4-57 prophage; predicted protein 2489 45.45 -1 2763535..2763798 - 87 16130547 yfjM b2629 - CP4-57 prophage; predicted protein 2490 44.32 -1 2763940..2765013 + 357 16130548 rnlA b2630 - CP4-57 prophage; RNase LS 2491 45.97 -1 2765006..2765377 + 123 90111470 yfjO b2631 - CP4-57 prophage; predicted protein 2492 54.05 0 2765732..2766595 + 287 49176249 yfjP b2632 - CP4-57 prophage; predicted GTP-binding protein 2493 55.60 0 2766687..2767508 + 273 16130551 yfjQ b2633 - CP4-57 prophage; predicted protein 2494 57.26 +1 2767725..2768426 + 233 16130552 yfjR b2634 - CP4-57 prophage; predicted DNA-binding transcriptional regulator 2495 53.16 0 2768467..2768703 + 78 90111471 ypjK b2635 - CP4-57 prophage; predicted inner membrane protein 2496 50.90 0 2768703..2769146 + 147 90111472 yfjS b2636 - CP4-57 prophage; predicted protein 2497 51.28 0 2769170..2769637 + 155 16130554 yfjT b2637 - CP4-57 prophage; predicted protein 2498 31.22 -2 2771340..2773043 + 567 16130557 yfjW b2642 - CP4-57 prophage; predicted inner membrane protein 2499 54.03 0 2773941..2774399 + 152 16130558 yfjX b2643 - CP4-57 prophage; predicted antirestriction protein 2500 54.24 0 2774408..2774890 + 160 16130559 yfjY b2644 - CP4-57 prophage; predicted DNA repair protein 2501 54.73 0 2774899..2775099 + 66 94541123 ypjJ b4548 - predicted protein 2502 54.40 0 2775137..2775454 + 105 16130560 yfjZ b2645 - CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system 2503 47.58 0 2775475..2775804 + 109 16130561 ypjF b2646 - CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system 2504 49.20 0 2776168..2780748 - 1526 90111474 ypjA b2647 - adhesin-like autotransporter 2505 54.29 0 2787007..2787984 + 325 90111476 csiD b2659 - predicted protein 2506 57.68 +1 2788004..2789272 + 422 90111477 ygaF b2660 - predicted enzyme 2507 58.32 +1 2789295..2790743 + 482 16130575 gabD b2661 - succinate-semialdehyde dehydrogenase I, NADP-dependent 2508 59.33 +1 2790757..2792037 + 426 16130576 gabT b2662 - 4-aminobutyrate aminotransferase, PLP-dependent 2509 51.32 0 2792275..2793675 + 466 16130577 gabP b2663 - gamma-aminobutyrate transporter 2510 53.54 0 2793696..2794358 + 220 90111478 csiR b2664 - DNA-binding transcriptional dual regulator 2511 48.44 0 2794359..2794808 - 149 16130579 ygaU b2665 - predicted protein 2512 50.94 0 2794892..2795050 - 52 16130580 yqaE b2666 - predicted membrane protein 2513 53.00 0 2795233..2795532 + 99 16130581 ygaV b2667 - predicted DNA-binding transcriptional regulator 2514 45.90 -1 2795542..2796066 + 174 16130582 ygaP b2668 - predicted inner membrane protein with hydrolase activity 2515 48.15 0 2796113..2796517 - 134 16130583 stpA b2669 - DNA binding protein, nucleoid-associated 2516 49.11 0 2797186..2797635 + 149 16130584 ygaW b2670 - predicted inner membrane protein 2517 46.96 0 2797672..2798016 - 114 16130585 ygaC b2671 - predicted protein 2518 53.80 0 2798156..2798497 + 113 49176257 ygaM b2672 - predicted protein 2519 53.25 0 2798745..2798990 + 81 16130587 nrdH b2673 - glutaredoxin-like protein 2520 55.96 +1 2798987..2799397 + 136 16130588 nrdI b2674 - protein that stimulates ribonucleotide reduction 2521 51.84 0 2799370..2801514 + 714 16130589 nrdE b2675 - ribonucleoside-diphosphate reductase 2, alpha subunit 2522 48.23 0 2801524..2802483 + 319 16130590 nrdF b2676 - ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein 2523 49.04 0 2802837..2804039 + 400 16130591 proV b2677 - glycine betaine transporter subunit 2524 58.12 +1 2804032..2805096 + 354 16130592 proW b2678 - glycine betaine transporter subunit 2525 52.57 0 2805154..2806146 + 330 16130593 proX b2679 - glycine betaine transporter subunit 2526 52.85 0 2807639..2808376 + 245 16130594 ygaZ b2682 - predicted transporter 2527 54.46 0 2808366..2808701 + 111 16130595 ygaH b2683 - predicted inner membrane protein 2528 49.15 0 2808792..2809322 + 176 16130596 mprA b2684 - DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux 2529 53.37 0 2809449..2810621 + 390 16130597 emrA b2685 - multidrug efflux system 2530 56.60 +1 2810638..2812176 + 512 16130598 emrB b2686 - multidrug efflux system protein 2531 51.55 0 2812240..2812755 - 171 16130599 luxS b2687 - S-ribosylhomocysteinase 2532 51.32 0 2812905..2814461 - 518 16130600 gshA b2688 - gamma-glutamate-cysteine ligase 2533 49.42 0 2814534..2814962 - 142 16130601 yqaA b2689 - conserved inner membrane protein 2534 53.44 0 2814959..2815525 - 188 16130602 yqaB b2690 - predicted hydrolase 2535 49.46 0 2816983..2817168 - 61 16130603 csrA b2696 - pleiotropic regulatory protein for carbon source metabolism 2536 53.63 0 2817403..2820033 - 876 16130604 alaS b2697 - alanyl-tRNA synthetase 2537 51.90 0 2820161..2820661 - 166 16130605 recX b2698 - regulatory protein for RecA 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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