version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2345 51.76 0 2596904..2597782 - 292 16130403 dapA b2478 - dihydrodipicolinate synthase 2346 50.09 0 2597928..2598500 + 190 90111443 gcvR b2479 - DNA-binding transcriptional repressor, regulatory protein accessory to GcvA 2347 49.47 0 2598500..2598970 + 156 16130405 bcp b2480 - thiol peroxidase, thioredoxin-dependent 2348 56.31 +1 2599223..2599840 + 205 90111444 hyfA b2481 - hydrogenase 4, 4Fe-4S subunit 2349 54.73 0 2599840..2601858 + 672 16130407 hyfB b2482 - hydrogenase 4, membrane subunit 2350 53.69 0 2601869..2602816 + 315 90111445 hyfC b2483 - hydrogenase 4, membrane subunit 2351 55.35 0 2602833..2604272 + 479 16130409 hyfD b2484 - hydrogenase 4, membrane subunit 2352 53.30 0 2604284..2604934 + 216 16130410 hyfE b2485 - hydrogenase 4, membrane subunit 2353 53.89 0 2604939..2606519 + 526 16130411 hyfF b2486 - hydrogenase 4, membrane subunit 2354 54.32 0 2606509..2608176 + 555 16130412 hyfG b2487 - hydrogenase 4, subunit 2355 54.95 0 2608186..2608731 + 181 16130413 hyfH b2488 - hydrogenase 4, Fe-S subunit 2356 55.73 0 2608728..2609486 + 252 16130414 hyfI b2489 - hydrogenase 4, Fe-S subunit 2357 52.66 0 2609479..2609892 + 137 90111446 hyfJ b2490 - predicted processing element hydrogenase 4 2358 52.61 0 2609922..2611934 + 670 90111447 hyfR b2491 - DNA-binding transcriptional activator, formate sensing 2359 51.24 0 2611956..2612804 + 282 16130417 focB b2492 - predicted formate transporter 2360 54.14 0 2612842..2613903 - 353 16130418 yfgO b2493 - predicted inner membrane protein 2361 53.89 0 2614116..2615579 + 487 16130419 yfgC b2494 - predicted peptidase 2362 52.50 0 2615600..2615959 + 119 16130420 yfgD b2495 - predicted oxidoreductase 2363 53.15 0 2616097..2616843 - 248 16130421 hda b2496 - ATPase regulatory factor involved in DnaA inactivation 2364 51.94 0 2616893..2618182 - 429 16130422 uraA b2497 - uracil transporter 2365 52.95 0 2618268..2618894 - 208 90111448 upp b2498 - uracil phosphoribosyltransferase 2366 52.89 0 2619219..2620256 + 345 16130424 purM b2499 - phosphoribosylaminoimidazole synthetase 2367 53.68 0 2620256..2620894 + 212 16130425 purN b2500 - phosphoribosylglycinamide formyltransferase 1 2368 48.86 0 2621066..2623132 + 688 16130426 ppk b2501 - polyphosphate kinase, component of RNA degradosome 2369 51.17 0 2623137..2624678 + 513 16130427 ppx b2502 - exopolyphosphatase 2370 46.61 0 2624717..2626960 - 747 16130428 yfgF b2503 - predicted inner membrane protein 2371 49.48 0 2627312..2627503 + 63 16130429 yfgG b2504 - predicted protein 2372 47.21 0 2627814..2628332 + 172 16130430 yfgH b2505 - predicted outer membrane lipoprotein 2373 49.26 0 2628348..2628887 + 179 16130431 yfgI b2506 - conserved protein 2374 54.12 0 2628980..2630557 - 525 16130432 guaA b2507 - GMP synthetase (glutamine aminotransferase) 2375 54.67 0 2630626..2632092 - 488 16130433 guaB b2508 - IMP dehydrogenase 2376 53.25 0 2632254..2633624 + 456 16130434 xseA b2509 - exonuclease VII, large subunit 2377 47.69 0 2633621..2633836 - 71 90111449 yfgJ b2510 - predicted protein 2378 52.21 0 2633906..2635378 - 490 90111450 der b2511 - predicted GTP-binding protein 2379 53.27 0 2635496..2636674 - 392 16130437 bamB b2512 - protein assembly complex, lipoprotein component 2380 49.76 0 2636685..2637305 - 206 16130438 yfgM b2513 - conserved protein 2381 54.75 0 2637323..2638597 - 424 16130439 hisS b2514 - histidyl tRNA synthetase 2382 53.26 0 2638708..2639826 - 372 16130440 ispG b2515 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2383 54.54 0 2639853..2640866 - 337 16130441 yfgA b2516 - conserved protein 2384 52.99 0 2641151..2642305 - 384 16130442 rlmN b2517 - predicted enzyme 2385 52.31 0 2642455..2642886 - 143 16130443 ndk b2518 - multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 2386 56.72 +1 2643035..2645347 - 770 16130444 pbpC b2519 - fused transglycosylase/transpeptidase 2387 52.96 0 2645348..2650309 - 1653 16130445 yfhM b2520 - conserved protein 2388 53.19 0 2650516..2651361 + 281 90111451 sseA b2521 - 3-mercaptopyruvate sulfurtransferase 2389 47.10 0 2652179..2652955 - 258 90111452 sseB b2522 - rhodanase-like enzyme, sulfur transfer from thiosulfate 2390 56.85 +1 2653097..2654380 - 427 90111453 pepB b2523 - aminopeptidase B 2391 50.25 0 2654558..2654758 - 66 16130449 iscX b2524 - conserved protein 2392 51.79 0 2654770..2655105 - 111 16130450 fdx b2525 - [2Fe-2S] ferredoxin 2393 57.70 +1 2655107..2656957 - 616 16130451 hscA b2526 - DnaK-like molecular chaperone specific for IscU 2394 52.33 0 2656974..2657489 - 171 16130452 hscB b2527 - DnaJ-like molecular chaperone specific for IscU 2395 51.54 0 2657585..2657908 - 107 16130453 iscA b2528 - FeS cluster assembly protein 2396 50.13 0 2657925..2658311 - 128 16130454 iscU b2529 - scaffold protein 2397 53.33 0 2658339..2659553 - 404 49176235 iscS b2530 - cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent 2398 53.58 0 2659665..2660153 - 162 16130456 iscR b2531 - DNA-binding transcriptional repressor 2399 55.47 0 2660605..2661345 - 246 16130457 trmJ b2532 - predicted methyltransferase 2400 54.48 0 2661464..2662267 + 267 16130458 suhB b2533 - inositol monophosphatase 2401 50.11 0 2662385..2663266 + 293 49176236 yfhR b2534 - predicted peptidase 2402 51.52 0 2663457..2664737 + 426 90111454 csiE b2535 - stationary phase inducible protein 2403 56.49 +1 2664729..2665868 - 379 16130461 hcaT b2536 - predicted 3-phenylpropionic transporter 2404 49.83 0 2666028..2666918 - 296 16130462 hcaR b2537 - DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism 2405 52.94 0 2667054..2668415 + 453 16130463 hcaE b2538 - 3-phenylpropionate dioxygenase, large (alpha) subunit 2406 52.22 0 2668412..2668930 + 172 16130464 hcaF b2539 - 3-phenylpropionate dioxygenase, small (beta) subunit 2407 55.45 0 2668930..2669250 + 106 16130465 hcaC b2540 - 3-phenylpropionate dioxygenase, predicted ferredoxin subunit 2408 56.09 +1 2669247..2670059 + 270 16130466 hcaB b2541 - 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2409 54.03 0 2670069..2671271 + 400 16130467 hcaD b2542 - phenylpropionate dioxygenase, ferredoxin reductase subunit 2410 49.65 0 2671368..2671790 + 140 145698300 yphA b2543 - predicted inner membrane protein 2411 55.21 0 2671838..2672710 - 290 16130469 yphB b2544 - conserved protein 2412 55.18 0 2672722..2673783 - 353 90111455 yphC b2545 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 2413 56.16 +1 2673849..2674847 - 332 16130471 yphD b2546 - predicted sugar transporter subunit: membrane component of ABC superfamily 2414 56.08 +1 2674872..2676383 - 503 16130472 yphE b2547 - fused predicted sugar transporter subunits of ABC superfamily: ATP-binding components 2415 46.14 -1 2676406..2677389 - 327 16130473 yphF b2548 - predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily 2416 54.88 0 2677486..2680767 - 1093 162135907 yphG b2549 - conserved protein 2417 50.59 0 2680885..2682078 + 397 90111457 yphH b2550 - predicted DNA-binding transcriptional regulator 2418 53.35 0 2682276..2683529 - 417 16130476 glyA b2551 - serine hydroxymethyltransferase 2419 52.48 0 2683857..2685047 + 396 16130477 hmp b2552 - fused nitric oxide dioxygenase/dihydropteridine reductase 2 2420 51.03 0 2685092..2685430 - 112 16130478 glnB b2553 - regulatory protein P-II for glutamine synthetase 2421 54.76 0 2685491..2686825 - 444 16130479 yfhA b2554 - predicted DNA-binding response regulator in two-component system 2422 54.20 0 2686815..2687528 - 237 16130480 yfhG b2555 - conserved protein 2423 53.15 0 2687693..2689120 - 475 90111458 yfhK b2556 - predicted sensory kinase in two-component system 2424 56.89 +1 2689678..2693565 - 1295 49176239 purL b2557 - phosphoribosylformyl-glycineamide synthetase 2425 50.42 0 2693823..2695379 + 518 171701683 yfhD b2558 - predicted periplasmic binding protein/transglycosylase 2426 54.76 0 2695376..2695879 - 167 145698301 tadA b2559 - tRNA-specific adenosine deaminase 2427 52.20 0 2695937..2696572 - 211 90111459 yfhB b2560 - conserved protein 2428 51.71 0 2696781..2697629 + 282 90111460 yfhH b2561 - predicted DNA-binding transcriptional regulator 2429 44.83 -1 2697685..2697945 + 86 16130487 yfhL b2562 - predicted 4Fe-4S cluster-containing protein 2430 51.44 0 2698640..2699020 - 126 16130488 acpS b2563 - holo-[acyl-carrier-protein] synthase 1 2431 56.42 +1 2699020..2699751 - 243 16130489 pdxJ b2564 - pyridoxine 5'-phosphate synthase 2432 54.05 0 2699763..2700491 - 242 16130490 recO b2565 - gap repair protein 2433 52.32 0 2700503..2701408 - 301 16130491 era b2566 - membrane-associated, 16S rRNA-binding GTPase 2434 50.66 0 2701405..2702085 - 226 16130492 rnc b2567 - RNase III 2435 52.00 0 2702357..2703331 - 324 16130493 lepB b2568 - leader peptidase (signal peptidase I) 2436 53.72 0 2703347..2705146 - 599 16130494 lepA b2569 - GTP-binding membrane protein 2437 54.79 0 2705344..2705823 - 159 16130495 rseC b2570 - RseC protein involved in reduction of the SoxR iron-sulfur cluster 2438 50.78 0 2705820..2706776 - 318 16130496 rseB b2571 - anti-sigma factor 2439 52.23 0 2706776..2707426 - 216 16130497 rseA b2572 - anti-sigma factor 2440 48.78 0 2707459..2708034 - 191 16130498 rpoE b2573 - RNA polymerase, sigma 24 (sigma E) factor 2441 53.17 0 2708442..2710064 + 540 16130499 nadB b2574 - quinolinate synthase, L-aspartate oxidase (B protein) subunit 2442 52.44 0 2710049..2710786 - 245 90111461 yfiC b2575 - predicted S-adenosyl-L-methionine-dependent methyltransferase 2443 54.76 0 2710918..2712252 + 444 16130501 srmB b2576 - ATP-dependent RNA helicase 2444 49.66 0 2712461..2713342 - 293 90111462 yfiE b2577 - predicted DNA-binding transcriptional regulator 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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