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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1820 48.00 0 1993842..1994066 + 74 16129862 yecF b1915 - predicted protein 1821 46.75 0 1994134..1994856 - 240 16129863 sdiA b1916 - DNA-binding transcriptional activator 1822 54.32 0 1995086..1995838 - 250 16129864 yecC b1917 - predicted transporter subunit: ATP-binding component of ABC superfamily 1823 52.77 0 1995835..1996503 - 222 16129865 yecS b1918 - predicted transporter subunit: membrane component of ABC superfamily 1824 54.00 0 1996518..1997504 - 328 90111355 dcyD b1919 - D-cysteine desulfhydrase, PLP-dependent 1825 49.81 0 1997609..1998409 - 266 16129867 fliY b1920 - cystine transporter subunit 1826 46.56 0 1998497..1999048 - 183 90111356 fliZ b1921 - predicted regulator of FliA activity 1827 54.17 0 1999094..1999813 - 239 49176170 fliA b1922 - RNA polymerase, sigma 28 (sigma F) factor 1828 47.49 0 2000134..2001630 - 498 16129870 fliC b1923 - flagellar filament structural protein (flagellin) 1829 52.24 0 2001896..2003302 + 468 16129871 fliD b1924 - flagellar filament capping protein 1830 49.88 0 2003327..2003737 + 136 16129872 fliS b1925 - flagellar protein potentiates polymerization 1831 51.64 0 2003737..2004102 + 121 16129873 fliT b1926 - predicted chaperone 1832 49.80 0 2004180..2005667 + 495 16129874 amyA b1927 - cytoplasmic alpha-amylase 1833 57.00 +1 2005701..2006114 - 137 16129875 yedD b1928 - predicted protein 1834 54.89 0 2006301..2007506 + 401 16129876 yedE b1929 - predicted inner membrane protein 1835 48.29 0 2007503..2007736 + 77 16129877 yedF b1930 - conserved protein 1836 51.87 0 2007845..2008513 + 222 49176171 yedK b1931 - predicted protein 1837 47.08 0 2008624..2009103 + 159 16129879 yedL b1932 - predicted acyltransferase 1838 53.97 0 2010724..2011038 - 104 16129884 fliE b1937 - flagellar basal-body component 1839 54.61 0 2011253..2012911 + 552 16129885 fliF b1938 - flagellar basal-body MS-ring and collar protein 1840 55.62 0 2012904..2013899 + 331 16129886 fliG b1939 - flagellar motor switching and energizing component 1841 57.06 +1 2013892..2014578 + 228 90111357 fliH b1940 - flagellar biosynthesis protein 1842 58.59 +1 2014578..2015951 + 457 16129888 fliI b1941 - flagellum-specific ATP synthase 1843 51.58 0 2015970..2016413 + 147 16129889 fliJ b1942 - flagellar protein 1844 54.88 0 2016410..2017537 + 375 16129890 fliK b1943 - flagellar hook-length control protein 1845 53.33 0 2017642..2018106 + 154 16129891 fliL b1944 - flagellar biosynthesis protein 1846 53.33 0 2018111..2019115 + 334 16129892 fliM b1945 - flagellar motor switching and energizing component 1847 55.07 0 2019112..2019525 + 137 16129893 fliN b1946 - flagellar motor switching and energizing component 1848 54.64 0 2019528..2019893 + 121 90111358 fliO b1947 - flagellar biosynthesis protein 1849 53.12 0 2019893..2020630 + 245 16129895 fliP b1948 - flagellar biosynthesis protein 1850 50.37 0 2020640..2020909 + 89 16129896 fliQ b1949 - flagellar biosynthesis protein 1851 47.46 0 2020917..2021702 + 261 16129897 fliR b1950 - flagellar export pore protein 1852 38.14 -2 2021992..2022615 + 207 16129898 rcsA b1951 - DNA-binding transcriptional activator, co-regulator with RcsB 1853 51.32 0 2022659..2022847 - 62 16129899 dsrB b1952 - predicted protein 1854 48.68 0 2023010..2023237 + 75 90111359 yodD b1953 - predicted protein 1855 52.08 0 2023535..2024350 + 271 16129901 yedP b1955 - conserved protein 1856 51.39 0 2024347..2026041 - 564 90111360 yedQ b1956 - predicted diguanylate cyclase 1857 53.01 0 2026212..2026394 - 60 16129903 yodC b1957 - predicted protein 1858 53.05 0 2026473..2027390 - 305 16129904 yedI b1958 - conserved inner membrane protein 1859 53.64 0 2027563..2028483 + 306 16129905 yedA b1959 - predicted inner membrane protein 1860 56.05 +1 2028472..2028942 - 156 16129906 vsr b1960 - DNA mismatch endonuclease of very short patch repair 1861 52.15 0 2028923..2030341 - 472 16129907 dcm b1961 - DNA cytosine methylase 1862 54.45 0 2030408..2031103 - 231 16129908 yedJ b1962 - predicted phosphohydrolase 1863 50.00 0 2031143..2031508 - 121 90111361 yedR b1963 - predicted inner membrane protein 1864 48.59 0 2033859..2034710 + 283 16129913 hchA b1967 - Hsp31 molecular chaperone 1865 39.66 -2 2034818..2036176 - 452 16129914 yedV b1968 - predicted sensory kinase in two-component regulatory system with YedW 1866 44.79 -1 2036176..2036847 - 223 90111362 yedW b1969 - predicted DNA-binding response regulator in two-component system with YedV 1867 41.79 -1 2036980..2037393 + 137 16129916 yedX b1970 - conserved protein 1868 52.14 0 2037502..2038506 + 334 16129917 yedY b1971 - predicted reductase 1869 47.96 0 2038507..2039142 + 211 16129918 yedZ b1972 - conserved inner membrane protein 1870 38.25 -2 2039399..2040049 + 216 16129919 yodA b1973 - conserved metal-binding protein 1871 42.18 -1 2040392..2040922 + 176 90111363 yodB b1974 - predicted cytochrome 1872 45.86 -1 2041675..2042472 + 265 90111364 mtfA b1976 - conserved protein 1873 49.99 0 2042962..2050038 + 2358 145698281 yeeJ b1978 - adhesin 1874 50.42 0 2051667..2052983 + 438 16129925 shiA b1981 - shikimate transporter 1875 50.24 0 2053085..2054539 + 484 16129926 amn b1982 - AMP nucleosidase 1876 39.89 -2 2054882..2055598 + 238 16129927 yeeN b1983 - conserved protein 1877 48.30 0 2056227..2057870 - 547 16129928 yeeO b1985 - predicted multidrug efflux system 1878 48.26 0 2057988..2058938 - 316 16129929 cbl b1987 - DNA-binding transcriptional activator of cysteine biosynthesis 1879 48.15 0 2059040..2059957 - 305 16129930 nac b1988 - DNA-binding transcriptional dual regulator of nitrogen assimilation 1880 49.62 0 2060415..2061347 - 310 16129931 erfK b1990 - conserved protein with NAD(P)-binding Rossmann-fold domain 1881 51.30 0 2061412..2062491 - 359 16129932 cobT b1991 - nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase 1882 53.49 0 2062503..2063246 - 247 16129933 cobS b1992 - cobalamin 5'-phosphate synthase 1883 50.55 0 2063243..2063788 - 181 16129934 cobU b1993 - bifunctional cobinamide kinase/ cobinamide phosphate guanylyltransferase 1884 54.67 0 2064329..2065345 - 338 16129935 insH b1994 - IS5 transposase and trans-activator 1885 55.08 0 2066976..2067881 - 301 16129937 insD b1996 - KpLE2 phage-like element; IS2 insertion element transposase InsAB' 1886 53.01 0 2067839..2068204 - 121 145698282 insC b1997 - KpLE2 phage-like element; IS2 insertion element repressor InsA 1887 58.24 +1 2069563..2072682 + 1039 49176177 flu b2000 - CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter 1888 50.29 0 2072803..2074335 + 510 90111368 yeeR b2001 - CP4-44 prophage; predicted membrane protein 1889 58.17 +1 2074332..2074778 + 148 16129943 yeeS b2002 - CP4-44 prophage; predicted DNA repair protein 1890 52.70 0 2074841..2075062 + 73 16129944 yeeT b2003 - CP4-44 prophage; predicted protein 1891 57.18 +1 2075136..2075504 + 122 16129945 yeeU b2004 - CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system 1892 53.07 0 2075593..2075967 + 124 16129946 yeeV b2005 - CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system 1893 47.88 0 2077056..2077385 - 109 145698283 yeeX b2007 - conserved protein 1894 50.80 0 2077557..2078615 - 352 16129949 yeeA b2008 - conserved inner membrane protein 1895 47.26 0 2078813..2079286 - 157 16129950 sbmC b2009 - DNA gyrase inhibitor 1896 49.27 0 2079405..2080571 - 388 162135904 dacD b2010 - D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) 1897 50.07 0 2080780..2082207 + 475 16129952 sbcB b2011 - exonuclease I 1898 50.44 0 2082250..2082477 - 75 16129953 yeeD b2012 - conserved protein 1899 50.42 0 2082491..2083549 - 352 16129954 yeeE b2013 - predicted inner membrane protein 1900 52.69 0 2083728..2085086 - 452 90111370 yeeF b2014 - predicted amino-acid transporter 1901 50.43 0 2085353..2086282 - 309 90111371 yeeY b2015 - predicted DNA-binding transcriptional regulator 1902 51.88 0 2086328..2087152 - 274 16129957 yeeZ b2016 - predicted epimerase, with NAD(P)-binding Rossmann-fold domain 1903 44.31 -1 2087235..2087489 - 84 94541116 yoeB b4539 - toxin of the YoeB-YefM toxin-antitoxin system 1904 48.41 0 2087486..2087737 - 83 90111372 yefM b2017 - antitoxin of the YoeB-YefM toxin-antitoxin system 1905 43.14 -1 2088020..2088070 + 16 16129959 hisL b2018 - his operon leader peptide 1906 54.11 0 2088216..2089115 + 299 16129960 hisG b2019 - ATP phosphoribosyltransferase 1907 58.08 +1 2089121..2090425 + 434 16129961 hisD b2020 - bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 1908 55.37 0 2090422..2091492 + 356 16129962 hisC b2021 - histidinol-phosphate aminotransferase 1909 53.37 0 2091492..2092559 + 355 90111373 hisB b2022 - fused histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase 1910 56.68 +1 2092559..2093149 + 196 16129964 hisH b2023 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF 1911 57.18 +1 2093149..2093886 + 245 90111374 hisA b2024 - N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 1912 51.87 0 2093868..2094644 + 258 16129966 hisF b2025 - imidazole glycerol phosphate synthase, catalytic subunit with HisH 1913 54.58 0 2094638..2095249 + 203 16129967 hisI b2026 - fused phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 1914 45.87 -1 2095345..2096325 - 326 90111375 cld b2027 - regulator of length of O-antigen component of lipopolysaccharide chains 1915 43.79 -1 2096471..2097637 - 388 16129969 ugd b2028 - UDP-glucose 6-dehydrogenase 1916 50.18 0 2097886..2099292 - 468 16129970 gnd b2029 - gluconate-6-phosphate dehydrogenase, decarboxylating 1917 54.67 0 2099919..2100935 - 338 16129971 insH b2030 - IS5 transposase and trans-activator 1918 31.90 -2 2101415..2102533 - 372 16129972 wbbK b2032 - lipopolysaccharide biosynthesis protein 1919 40.61 -2 2102518..2103108 - 196 16129973 wbbJ b2033 - predicted acyl transferase 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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