version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1775 53.75 0 1946774..1948546 - 590 16129819 aspS b1866 - aspartyl-tRNA synthetase 1776 53.09 0 1948856..1949422 + 188 90111348 yecD b1867 - predicted hydrolase 1777 51.04 0 1949419..1950237 + 272 16129821 yecE b1868 - conserved protein 1778 50.76 0 1950290..1950685 + 131 90111349 yecN b1869 - predicted inner membrane protein 1779 50.67 0 1950726..1951469 + 247 16129823 cmoA b1870 - predicted methyltransferase 1780 52.06 0 1951466..1952437 + 323 16129824 cmoB b1871 - predicted S-adenosyl-L-methionine-dependent methyltransferase 1781 51.32 0 1952602..1955031 - 809 90111350 torZ b1872 - trimethylamine N-oxide reductase system III, catalytic subunit 1782 47.41 0 1955056..1956156 - 366 16129826 torY b1873 - TMAO reductase III (TorYZ), cytochrome c-type subunit 1783 51.94 0 1956544..1957290 - 248 90111351 cutC b1874 - copper homeostasis protein 1784 50.79 0 1957304..1957870 - 188 90111352 yecM b1875 - predicted metal-binding enzyme 1785 53.29 0 1958086..1959819 + 577 16129828 argS b1876 - arginyl-tRNA synthetase 1786 38.85 -2 1959996..1960484 + 162 90111353 yecT b1877 - predicted protein 1787 52.67 0 1960604..1960996 - 130 16129830 flhE b1878 - conserved protein 1788 54.88 0 1960996..1963074 - 692 16129831 flhA b1879 - predicted flagellar export pore protein 1789 54.92 0 1963067..1964215 - 382 16129832 flhB b1880 - predicted flagellar export pore protein 1790 53.49 0 1964417..1965061 - 214 16129833 cheZ b1881 - chemotaxis regulator, protein phosphatase for CheY 1791 49.23 0 1965072..1965461 - 129 16129834 cheY b1882 - chemotaxis regulator transmitting signal to flagellar motor component 1792 54.29 0 1965476..1966525 - 349 16129835 cheB b1883 - fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA 1793 54.24 0 1966528..1967388 - 286 16129836 cheR b1884 - chemotaxis regulator, protein-glutamate methyltransferase 1794 53.56 0 1967407..1969008 - 533 16129837 tap b1885 - methyl-accepting protein IV 1795 52.77 0 1969054..1970715 - 553 16129838 tar b1886 - methyl-accepting chemotaxis protein II 1796 51.98 0 1970860..1971363 - 167 16129839 cheW b1887 - purine-binding chemotaxis protein 1797 53.13 0 1971384..1973348 - 654 16129840 cheA b1888 - fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein 1798 53.18 0 1973353..1974279 - 308 16129841 motB b1889 - protein that enables flagellar motor rotation 1799 51.35 0 1974276..1975163 - 295 16129842 motA b1890 - proton conductor component of flagella motor 1800 49.05 0 1975290..1975868 - 192 16129843 flhC b1891 - DNA-binding transcriptional dual regulator with FlhD 1801 46.44 0 1975871..1976221 - 116 145698279 flhD b1892 - DNA-binding transcriptional dual regulator with FlhC 1802 54.56 0 1976542..1977045 - 167 16129845 insB b1893 - IS1 transposase InsAB' 1803 52.90 0 1976964..1977239 - 91 16129846 insA b1894 - KpLE2 phage-like element; IS1 repressor protein InsA 1804 44.99 -1 1977777..1978205 + 142 16129847 uspC b1895 - universal stress protein 1805 49.19 0 1978212..1979636 - 474 16129848 otsA b1896 - trehalose-6-phosphate synthase 1806 50.56 0 1979611..1980411 - 266 16129849 otsB b1897 - trehalose-6-phosphate phosphatase, biosynthetic 1807 51.17 0 1980578..1981564 - 328 145698280 araH b4460 - fused L-arabinose transporter subunits of ABC superfamily: membrane components 1808 52.28 0 1981579..1983093 - 504 16129850 araG b1900 - fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components 1809 51.82 0 1983163..1984152 - 329 16129851 araF b1901 - L-arabinose transporter subunit 1810 47.82 0 1984949..1985452 + 167 16129852 ftnB b1902 - predicted ferritin-like protein 1811 48.41 0 1985531..1985782 - 83 94541093 yecJ b4537 - predicted protein 1812 50.31 0 1986246..1986569 + 107 16129854 yecR b1904 - predicted protein 1813 42.77 -1 1986740..1987237 + 165 16129855 ftnA b1905 - ferritin iron storage protein (cytoplasmic) 1814 47.08 0 1987275..1987514 - 79 16129856 yecH b1906 - predicted protein 1815 51.24 0 1987705..1988916 + 403 16129857 tyrP b1907 - tyrosine transporter 1816 53.00 0 1988978..1989643 - 221 16129858 yecA b1908 - conserved metal-binding protein 1817 52.46 0 1990293..1990841 - 182 16129859 pgsA b1912 - phosphatidylglycerophosphate synthetase 1818 51.72 0 1990898..1992730 - 610 90111354 uvrC b1913 - excinuclease UvrABC, endonuclease subunit 1819 49.77 0 1992727..1993383 - 218 16129861 uvrY b1914 - DNA-binding response regulator in two-component regulatory system with BarA 1820 48.00 0 1993842..1994066 + 74 16129862 yecF b1915 - predicted protein 1821 46.75 0 1994134..1994856 - 240 16129863 sdiA b1916 - DNA-binding transcriptional activator 1822 54.32 0 1995086..1995838 - 250 16129864 yecC b1917 - predicted transporter subunit: ATP-binding component of ABC superfamily 1823 52.77 0 1995835..1996503 - 222 16129865 yecS b1918 - predicted transporter subunit: membrane component of ABC superfamily 1824 54.00 0 1996518..1997504 - 328 90111355 dcyD b1919 - D-cysteine desulfhydrase, PLP-dependent 1825 49.81 0 1997609..1998409 - 266 16129867 fliY b1920 - cystine transporter subunit 1826 46.56 0 1998497..1999048 - 183 90111356 fliZ b1921 - predicted regulator of FliA activity 1827 54.17 0 1999094..1999813 - 239 49176170 fliA b1922 - RNA polymerase, sigma 28 (sigma F) factor 1828 47.49 0 2000134..2001630 - 498 16129870 fliC b1923 - flagellar filament structural protein (flagellin) 1829 52.24 0 2001896..2003302 + 468 16129871 fliD b1924 - flagellar filament capping protein 1830 49.88 0 2003327..2003737 + 136 16129872 fliS b1925 - flagellar protein potentiates polymerization 1831 51.64 0 2003737..2004102 + 121 16129873 fliT b1926 - predicted chaperone 1832 49.80 0 2004180..2005667 + 495 16129874 amyA b1927 - cytoplasmic alpha-amylase 1833 57.00 +1 2005701..2006114 - 137 16129875 yedD b1928 - predicted protein 1834 54.89 0 2006301..2007506 + 401 16129876 yedE b1929 - predicted inner membrane protein 1835 48.29 0 2007503..2007736 + 77 16129877 yedF b1930 - conserved protein 1836 51.87 0 2007845..2008513 + 222 49176171 yedK b1931 - predicted protein 1837 47.08 0 2008624..2009103 + 159 16129879 yedL b1932 - predicted acyltransferase 1838 53.97 0 2010724..2011038 - 104 16129884 fliE b1937 - flagellar basal-body component 1839 54.61 0 2011253..2012911 + 552 16129885 fliF b1938 - flagellar basal-body MS-ring and collar protein 1840 55.62 0 2012904..2013899 + 331 16129886 fliG b1939 - flagellar motor switching and energizing component 1841 57.06 +1 2013892..2014578 + 228 90111357 fliH b1940 - flagellar biosynthesis protein 1842 58.59 +1 2014578..2015951 + 457 16129888 fliI b1941 - flagellum-specific ATP synthase 1843 51.58 0 2015970..2016413 + 147 16129889 fliJ b1942 - flagellar protein 1844 54.88 0 2016410..2017537 + 375 16129890 fliK b1943 - flagellar hook-length control protein 1845 53.33 0 2017642..2018106 + 154 16129891 fliL b1944 - flagellar biosynthesis protein 1846 53.33 0 2018111..2019115 + 334 16129892 fliM b1945 - flagellar motor switching and energizing component 1847 55.07 0 2019112..2019525 + 137 16129893 fliN b1946 - flagellar motor switching and energizing component 1848 54.64 0 2019528..2019893 + 121 90111358 fliO b1947 - flagellar biosynthesis protein 1849 53.12 0 2019893..2020630 + 245 16129895 fliP b1948 - flagellar biosynthesis protein 1850 50.37 0 2020640..2020909 + 89 16129896 fliQ b1949 - flagellar biosynthesis protein 1851 47.46 0 2020917..2021702 + 261 16129897 fliR b1950 - flagellar export pore protein 1852 38.14 -2 2021992..2022615 + 207 16129898 rcsA b1951 - DNA-binding transcriptional activator, co-regulator with RcsB 1853 51.32 0 2022659..2022847 - 62 16129899 dsrB b1952 - predicted protein 1854 48.68 0 2023010..2023237 + 75 90111359 yodD b1953 - predicted protein 1855 52.08 0 2023535..2024350 + 271 16129901 yedP b1955 - conserved protein 1856 51.39 0 2024347..2026041 - 564 90111360 yedQ b1956 - predicted diguanylate cyclase 1857 53.01 0 2026212..2026394 - 60 16129903 yodC b1957 - predicted protein 1858 53.05 0 2026473..2027390 - 305 16129904 yedI b1958 - conserved inner membrane protein 1859 53.64 0 2027563..2028483 + 306 16129905 yedA b1959 - predicted inner membrane protein 1860 56.05 +1 2028472..2028942 - 156 16129906 vsr b1960 - DNA mismatch endonuclease of very short patch repair 1861 52.15 0 2028923..2030341 - 472 16129907 dcm b1961 - DNA cytosine methylase 1862 54.45 0 2030408..2031103 - 231 16129908 yedJ b1962 - predicted phosphohydrolase 1863 50.00 0 2031143..2031508 - 121 90111361 yedR b1963 - predicted inner membrane protein 1864 48.59 0 2033859..2034710 + 283 16129913 hchA b1967 - Hsp31 molecular chaperone 1865 39.66 -2 2034818..2036176 - 452 16129914 yedV b1968 - predicted sensory kinase in two-component regulatory system with YedW 1866 44.79 -1 2036176..2036847 - 223 90111362 yedW b1969 - predicted DNA-binding response regulator in two-component system with YedV 1867 41.79 -1 2036980..2037393 + 137 16129916 yedX b1970 - conserved protein 1868 52.14 0 2037502..2038506 + 334 16129917 yedY b1971 - predicted reductase 1869 47.96 0 2038507..2039142 + 211 16129918 yedZ b1972 - conserved inner membrane protein 1870 38.25 -2 2039399..2040049 + 216 16129919 yodA b1973 - conserved metal-binding protein 1871 42.18 -1 2040392..2040922 + 176 90111363 yodB b1974 - predicted cytochrome 1872 45.86 -1 2041675..2042472 + 265 90111364 mtfA b1976 - conserved protein 1873 49.99 0 2042962..2050038 + 2358 145698281 yeeJ b1978 - adhesin 1874 50.42 0 2051667..2052983 + 438 16129925 shiA b1981 - shikimate transporter 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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