version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1457 49.49 0 1627477..1628937 - 486 16129501 ydfI b1542 - predicted mannonate dehydrogenase 1458 33.33 -2 1631063..1631329 + 88 16129503 ydfK b1544 - Qin prophage; predicted DNA-binding transcriptional regulator 1459 44.84 -1 1631646..1632236 + 196 16129504 pinQ b1545 - Qin prophage; predicted site-specific recombinase 1460 48.26 0 1632334..1632909 - 191 16129505 tfaQ b1546 - Qin prophage; predicted tail fibre assembly protein 1461 52.65 0 1632909..1633871 - 320 16129506 ydfN b1547 - Qin prophage; predicted side tail fibre assembly protein 1462 44.44 -1 1634780..1635013 + 77 94541112 ynfO b4533 - hypothetical protein, Qin prophage 1463 31.63 -2 1635071..1635481 + 136 90111292 ydfO b1549 - Qin prophage; predicted protein 1464 29.89 -2 1635633..1635806 - 57 90111293 gnsB b1550 - Qin prophage; predicted protein 1465 43.59 -1 1635978..1636133 - 51 90111294 ynfN b1551 - Qin prophage; predicted protein 1466 40.38 -2 1636479..1636691 - 70 16129511 cspI b1552 - Qin prophage; cold shock protein 1467 45.78 -1 1637054..1637551 - 165 16129512 ydfP b1553 - Qin prophage; conserved protein 1468 50.56 0 1637548..1638081 - 177 16129513 arrQ b1554 - Qin prophage; predicted lysozyme 1469 43.59 -1 1638078..1638389 - 103 16129514 ydfR b1555 - Qin prophage; predicted protein 1470 46.30 -1 1638394..1638609 - 71 90111295 essQ b1556 - Qin prophage; predicted S lysis protein 1471 35.19 -2 1639363..1639578 - 71 16129516 cspB b1557 - Qin prophage; cold shock protein 1472 48.36 0 1639879..1640091 + 70 16129517 cspF b1558 - Qin prophage; cold shock protein 1473 47.94 0 1640513..1641265 - 250 90111296 quuQ b1559 - Qin prophage; predicted antitermination protein Q 1474 52.22 0 1641279..1642226 - 315 145698264 ydfU b1560 - Qin prophage; predicted protein 1475 40.48 -2 1642675..1642926 - 83 16129520 rem b1561 - Qin prophage; predicted protein 1476 51.92 0 1643143..1643298 - 51 16129521 hokD b1562 - Qin prophage; small toxic polypeptide 1477 46.88 0 1643370..1643657 - 95 16129522 relE b1563 - Qin prophage; toxin of the RelE-RelB toxin-antitoxin system 1478 47.08 0 1643657..1643896 - 79 16129523 relB b1564 - Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor 1479 46.08 -1 1643921..1644226 + 101 16129524 ydfV b1565 - Qin prophage; predicted protein 1480 42.94 -1 1644429..1644761 + 110 16129525 flxA b1566 - Qin prophage; predicted protein 1481 41.67 -1 1645146..1645373 - 75 145698265 ydfW b1567 - Qin prophage; predicted protein 1482 50.52 0 1645370..1645660 - 96 16129527 ydfX b1568 - Qin prophage; predicted protein 1483 46.75 0 1645644..1645874 - 76 16129528 dicC b1569 - Qin prophage; DNA-binding transcriptional regulator for DicB 1484 43.63 -1 1645958..1646365 + 135 16129529 dicA b1570 - Qin prophage; predicted regulator for DicB 1485 48.08 0 1646532..1646687 + 51 16129530 ydfA b1571 - Qin prophage; predicted protein 1486 46.51 0 1646689..1646817 + 42 90111298 ydfB b1572 - Qin prophage; predicted protein 1487 35.98 -2 1647633..1647821 + 62 16129533 dicB b1575 - Qin prophage; cell division inhibition protein 1488 43.23 -1 1647818..1648009 + 63 16129534 ydfD b1576 - Qin prophage; predicted protein 1489 44.90 -1 1650920..1651939 - 339 16129538 rspB b1580 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 1490 50.70 0 1651951..1653165 - 404 16129539 rspA b1581 - predicted dehydratase 1491 51.68 0 1653371..1653697 - 108 16129540 ynfA b1582 - conserved inner membrane protein 1492 51.17 0 1653832..1654173 + 113 16129541 ynfB b1583 - predicted protein 1493 46.88 0 1654208..1654768 + 186 16129542 speG b1584 - spermidine N1-acetyltransferase 1494 43.74 -1 1654771..1655481 - 236 90111299 ynfC b1585 - predicted protein 1495 56.21 +1 1655589..1655894 + 101 90111300 ynfD b1586 - predicted protein 1496 50.76 0 1656093..1658519 + 808 16129545 ynfE b1587 - oxidoreductase subunit 1497 51.20 0 1658580..1661003 + 807 171701681 ynfF b1588 - oxidoreductase subunit 1498 52.91 0 1661014..1661631 + 205 16129547 ynfG b1589 - oxidoreductase, Fe-S subunit 1499 52.63 0 1661633..1662487 + 284 16129548 ynfH b1590 - oxidoreductase, membrane subunit 1500 53.33 0 1662530..1663144 + 204 90111302 dmsD b1591 - twin-argninine leader-binding protein for DmsA and TorA 1501 54.26 0 1663339..1664595 + 418 90111303 clcB b1592 - predicted voltage-gated chloride channel 1502 52.16 0 1664548..1665243 - 231 90111304 ynfK b1593 - predicted dethiobiotin synthetase 1503 52.25 0 1665368..1666588 - 406 16129552 dgsA b1594 - DNA-binding transcriptional repressor 1504 52.68 0 1666723..1667616 - 297 16129553 ynfL b1595 - predicted DNA-binding transcriptional regulator 1505 52.95 0 1667723..1668976 + 417 16129554 ynfM b1596 - predicted transporter 1506 51.13 0 1669400..1669708 + 102 90111305 asr b1597 - acid shock-inducible periplasmic protein 1507 42.86 -1 1669801..1669884 + 27 145698267 ydgU b4601 - hypothetical protein 1508 52.07 0 1669984..1670805 + 273 16129556 ydgD b1598 - predicted peptidase 1509 51.52 0 1670844..1671173 - 109 16129557 mdtI b1599 - multidrug efflux system transporter 1510 42.35 -1 1671160..1671525 - 121 16129558 mdtJ b1600 - multidrug efflux system transporter 1511 50.24 0 1671937..1672971 + 344 16129559 tqsA b1601 - predicted inner membrane protein 1512 52.63 0 1672996..1674384 - 462 16129560 pntB b1602 - pyridine nucleotide transhydrogenase, beta subunit 1513 52.45 0 1674395..1675927 - 510 16129561 pntA b1603 - pyridine nucleotide transhydrogenase, alpha subunit 1514 51.11 0 1676451..1677395 + 314 16129562 ydgH b1604 - predicted protein 1515 53.51 0 1677581..1678963 + 460 16129563 ydgI b1605 - predicted arginine/ornithine antiporter transporter 1516 50.90 0 1679000..1679722 + 240 16129564 folM b1606 - dihydrofolate reductase isozyme 1517 47.32 0 1679719..1680054 - 111 16129565 ydgC b1607 - conserved inner membrane protein associated with alginate biosynthesis 1518 49.31 0 1680183..1680902 + 239 145698268 rstA b1608 - DNA-binding response regulator in two-component regulatory system with RstB 1519 50.69 0 1680906..1682207 + 433 16129567 rstB b1609 - sensory histidine kinase in two-component regulatory system with RstA 1520 50.75 0 1682283..1683212 + 309 16129568 tus b1610 - inhibitor of replication at Ter, DNA-binding protein 1521 53.77 0 1683209..1684612 - 467 16129569 fumC b1611 - fumarate hydratase (fumarase C),aerobic Class II 1522 51.55 0 1684755..1686401 - 548 16129570 fumA b1612 - fumarate hydratase (fumarase A), aerobic Class I 1523 50.77 0 1686600..1687775 + 391 49176125 manA b1613 - mannose-6-phosphate isomerase 1524 49.04 0 1687876..1689384 + 502 16129572 ydgA b1614 - conserved protein 1525 47.16 0 1689610..1690875 - 421 90111306 uidC b1615 - predicted outer membrane porin protein 1526 52.26 0 1692284..1694095 - 603 16129575 uidA b1617 - beta-D-glucuronidase 1527 50.93 0 1694486..1695076 - 196 16129576 uidR b1618 - DNA-binding transcriptional repressor 1528 47.27 0 1695297..1696064 - 255 16129577 hdhA b1619 - 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent 1529 53.94 0 1696176..1697204 - 342 16129578 malI b1620 - DNA-binding transcriptional repressor 1530 52.73 0 1697379..1698971 + 530 16129579 malX b1621 - fused maltose and glucose-specific PTS enzymes: IIB component -! IIC component 1531 50.98 0 1698981..1700153 + 390 16129580 malY b1622 - bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon 1532 53.89 0 1700257..1701258 + 333 16129581 add b1623 - adenosine deaminase 1533 53.31 0 1701292..1702332 - 346 90111307 ydgJ b1624 - predicted oxidoreductase 1534 42.86 -1 1702575..1702700 + 41 49176127 blr b4409 - beta-lactam resistance membrane protein 1535 47.22 0 1702973..1703188 + 71 16129583 cnu b1625 - predicted regulator 1536 48.75 0 1703274..1703714 + 146 90111308 ydgK b1626 - conserved inner membrane protein 1537 51.55 0 1703791..1704372 + 193 16129585 rsxA b1627 - predicted inner membrane subunit 1538 54.58 0 1704372..1704950 + 192 16129586 rsxB b1628 - predicted iron-sulfur protein 1539 55.38 0 1704943..1707165 + 740 16129587 rsxC b1629 - fused predicted 4Fe-4S ferredoxin-type protein/conserved protein 1540 52.60 0 1707166..1708224 + 352 16129588 rsxD b1630 - predicted inner membrane oxidoreductase 1541 53.14 0 1708228..1708848 + 206 16129589 rsxG b1631 - predicted oxidoreductase 1542 52.73 0 1708852..1709547 + 231 16129590 rsxE b1632 - predicted inner membrane NADH-quinone reductase 1543 49.21 0 1709547..1710182 + 211 16129591 nth b1633 - DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 1544 51.63 0 1710793..1712295 + 500 16129592 tppB b1634 - predicted transporter 1545 50.50 0 1712401..1713006 + 201 16129593 gst b1635 - glutathionine S-transferase 1546 53.01 0 1713050..1713913 - 287 16129594 pdxY b1636 - pyridoxal kinase 2/pyridoxine kinase 1547 51.53 0 1713972..1715246 - 424 16129595 tyrS b1637 - tyrosyl-tRNA synthetase 1548 51.90 0 1715375..1716031 - 218 16129596 pdxH b1638 - pyridoxine 5'-phosphate oxidase 1549 45.76 -1 1716090..1716419 - 109 90111309 ydhA b1639 - predicted lipoprotein 1550 54.59 0 1716517..1717626 - 369 16129598 anmK b1640 - conserved protein 1551 51.28 0 1717900..1718367 + 155 49176129 slyB b1641 - outer membrane lipoprotein 1552 48.28 0 1718414..1718848 - 144 90111310 slyA b1642 - DNA-binding transcriptional activator 1553 48.95 0 1719049..1719285 + 78 16129601 ydhI b1643 - predicted inner membrane protein 1554 50.23 0 1719288..1720145 + 285 90111311 ydhJ b1644 - undecaprenyl pyrophosphate phosphatase 1555 52.76 0 1720145..1722157 + 670 16129603 ydhK b1645 - conserved inner membrane protein 1556 52.87 0 1722158..1722679 - 173 16129604 sodC b1646 - superoxide dismutase, Cu, Zn 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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