IslandPath Analysis: Escherichia coli str. K12 substr. MG1655



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.16   STD DEV: 4.75
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675
4132 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1294	 55.45	0	1425770..1426750	-	326	16129331	insH	b1370	-	IS5 transposase and trans-activator
1295	 53.35	0	1427073..1430435	+	1120	90111261	stfR	b1372	-	Rac prophage; predicted tail fiber protein
1296	 48.09	0	1430435..1431010	+	191	16129334	tfaR	b1373	-	Rac prophage; predicted tail fiber assembly protein
1297	 44.67	-1	1431108..1431698	-	196	16129335	pinR	b1374	-	Rac prophage; predicted site-specific recombinase
1298	 33.71	-2	1432015..1432281	-	88	16129336	ynaE	b1375	-	Rac prophage; predicted DNA-binding transcriptional regulator
1299	 48.51	0	1433209..1433643	-	144	90111262	uspF	b1376	-	stress-induced protein, ATP-binding protein
1300	 46.65	0	1433784..1434917	-	377	16129338	ompN	b1377	-	outer membrane pore protein N, non-specific
1301	 53.25	0	1435284..1438808	-	1174	16129339	ydbK	b1378	-	fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein
1302	 54.68	0	1439082..1439348	+	88	94541111	ydbJ	b4529	-	predicted protein
1303	 46.81	0	1439345..1439767	-	140	16129340	hslJ	b1379	-	heat-inducible protein
1304	 50.10	0	1439878..1440867	-	329	16129341	ldhA	b1380	-	fermentative D-lactate dehydrogenase, NAD-dependent
1305	 52.12	0	1441075..1443714	+	879	16129342	ydbH	b1381	-	predicted protein
1306	 43.01	-1	1443711..1443896	+	61	16129343	ynbE	b1382	-	predicted lipoprotein
1307	 44.95	-1	1443904..1444230	+	108	90111263	ydbL	b1383	-	conserved protein
1308	 48.57	0	1444402..1445307	-	301	16129345	feaR	b1384	-	DNA-binding transcriptional dual regulator
1309	 53.40	0	1445543..1447042	+	499	90111264	feaB	b1385	-	phenylacetaldehyde dehydrogenase
1310	 50.62	0	1447100..1449373	-	757	162135920	tynA	b1386	-	tyramine oxidase, copper-requiring
1311	 54.20	0	1449621..1451666	-	681	16129348	maoC	b1387	-	fused aldehyde dehydrogenase/enoyl-CoA hydratase
1312	 52.15	0	1451951..1452880	+	309	16129349	paaA	b1388	-	predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
1313	 49.65	0	1452892..1453179	+	95	16129350	paaB	b1389	-	predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
1314	 53.01	0	1453188..1453934	+	248	16129351	paaC	b1390	-	predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
1315	 55.75	0	1453943..1454446	+	167	145698253	paaD	b1391	-	predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
1316	 53.31	0	1454454..1455524	+	356	16129353	paaE	b1392	-	predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation
1317	 54.56	0	1455521..1456288	+	255	16129354	paaF	b1393	-	enoyl-CoA hydratase-isomerase
1318	 54.50	0	1456288..1457076	+	262	16129355	paaG	b1394	-	acyl-CoA hydratase
1319	 53.22	0	1457078..1458505	+	475	16129356	paaH	b1395	-	3-hydroxybutyryl-CoA dehydrogenase
1320	 51.54	0	1458495..1458917	+	140	16129357	paaI	b1396	-	predicted thioesterase
1321	 55.97	+1	1458917..1460122	+	401	16129358	paaJ	b1397	-	predicted beta-ketoadipyl CoA thiolase
1322	 51.83	0	1460149..1461462	+	437	16129359	paaK	b1398	-	phenylacetyl-CoA ligase
1323	 50.37	0	1461563..1462513	+	316	16129360	paaX	b1399	-	DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive
1324	 50.59	0	1462495..1463085	+	196	16129361	paaY	b1400	-	predicted hexapeptide repeat acetyltransferase
1325	 55.08	0	1465945..1466850	-	301	16129363	insD	b1402	-	KpLE2 phage-like element; IS2 insertion element transposase InsAB'
1326	 53.01	0	1466808..1467173	-	121	145698254	insC	b1403	-	KpLE2 phage-like element; IS2 insertion element repressor InsA
1327	 45.83	-1	1467382..1468533	+	383	16129365	insI	b1404	-	KpLE2 phage-like element; IS30 transposase
1328	 53.08	0	1472245..1473105	+	286	16129367	ydbC	b1406	-	predicted oxidoreductase, NAD(P)-binding
1329	 43.48	-1	1473168..1475474	+	768	90111266	ydbD	b1407	-	predicted protein
1330	 46.53	0	1475645..1476250	+	201	90111267	ynbA	b1408	-	predicted inner membrane protein
1331	 43.59	-1	1476250..1477146	+	298	16129370	ynbB	b1409	-	predicted CDP-diglyceride synthase
1332	 50.91	0	1477162..1478919	+	585	16129371	ynbC	b1410	-	predicted hydrolase
1333	 50.58	0	1478933..1480225	+	430	16129372	ynbD	b1411	-	predicted phosphatase, inner membrane protein
1334	 51.98	0	1480279..1480884	-	201	16129373	azoR	b1412	-	NADH-azoreductase, FMN-dependent
1335	 53.45	0	1481085..1484987	+	1300	145698255	hrpA	b1413	-	ATP-dependent helicase
1336	 51.19	0	1485259..1486059	+	266	16129375	ydcF	b1414	-	conserved protein
1337	 50.97	0	1486256..1487695	+	479	16129376	aldA	b1415	-	aldehyde dehydrogenase A, NAD-linked
1338	 47.65	0	1488926..1489456	+	176	90111268	cybB	b1418	-	cytochrome b561
1339	 44.25	-1	1489701..1489874	+	57	16129378	ydcA	b1419	-	predicted protein
1340	 53.33	0	1489946..1490095	-	49	49176107	hokB	b4428	-	toxic polypeptide, small
1341	 51.19	0	1489986..1490153	-	55	16129379	mokB	b1420	-	regulatory peptide
1342	 51.25	0	1490494..1492134	+	546	16129380	trg	b1421	-	methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
1343	 50.54	0	1492172..1493095	-	307	90111269	ydcI	b1422	-	predicted DNA-binding transcriptional regulator
1344	 52.68	0	1493312..1494655	+	447	16129382	ydcJ	b1423	-	conserved protein
1345	 50.79	0	1494880..1496535	+	551	145698256	mdoD	b1424	-	glucan biosynthesis protein, periplasmic
1346	 41.33	-2	1496675..1496899	+	74	90111271	ydcH	b1426	-	predicted protein
1347	 43.33	-1	1496962..1497501	+	179	16129386	rimL	b1427	-	ribosomal-protein-L7/L12-serine acetyltransferase
1348	 48.42	0	1497493..1498473	-	326	16129387	ydcK	b1428	-	predicted enzyme
1349	 53.17	0	1498597..1499589	+	330	16129388	tehA	b1429	-	potassium-tellurite ethidium and proflavin transporter
1350	 45.96	-1	1499586..1500179	+	197	16129389	tehB	b1430	-	predicted S-adenosyl-L-methionine-dependent methyltransferase
1351	 44.69	-1	1500481..1501149	+	222	16129390	ydcL	b1431	-	predicted lipoprotein
1352	 51.45	0	1501681..1502889	+	402	16129391	ydcM	b1432	-	predicted transposase
1353	 52.98	0	1502929..1504104	-	391	90111272	ydcO	b1433	-	predicted benzoate transporter
1354	 49.35	0	1504196..1504732	+	178	16129393	ydcN	b1434	-	predicted DNA-binding transcriptional regulator
1355	 51.07	0	1504805..1506766	+	653	90111273	ydcP	b1435	-	predicted peptidase
1356	 48.92	0	1506858..1507088	-	76	16129395	yncJ	b1436	-	predicted protein
1357	 49.15	0	1507310..1507486	+	58	94541092	yncN	b4532	-	predicted protein
1358	 45.56	-1	1507532..1507948	+	138	145698257	ydcQ	b1438	-	predicted DNA-binding transcriptional regulator
1359	 51.39	0	1508027..1509433	+	468	16129398	ydcR	b1439	-	fused predicted DNA-binding transcriptional regulator/predicted amino transferase
1360	 52.79	0	1509678..1510823	+	381	16129399	ydcS	b1440	-	predicted spermidine/putrescine transporter subunit
1361	 54.44	0	1510841..1511854	+	337	16129400	ydcT	b1441	-	predicted spermidine/putrescine transporter subunit
1362	 52.97	0	1511855..1512796	+	313	16129401	ydcU	b1442	-	predicted spermidine/putrescine transporter subunit
1363	 53.96	0	1512786..1513580	+	264	16129402	ydcV	b1443	-	predicted spermidine/putrescine transporter subunit
1364	 53.19	0	1513602..1515026	+	474	16129403	ydcW	b1444	-	medium chain aldehyde dehydrogenase
1365	 33.33	-2	1515123..1515218	-	31	145698258	yncL	b4598	-	hypothetical protein
1366	 44.83	-1	1515413..1515586	+	57	90111274	ydcX	b1445	-	predicted inner membrane protein
1367	 54.27	0	1515672..1515905	+	77	16129405	ydcY	b1446	-	predicted protein
1368	 51.78	0	1515906..1516355	-	149	16129406	ydcZ	b1447	-	predicted inner membrane protein
1369	 53.18	0	1516352..1516870	-	172	16129407	yncA	b1448	-	predicted acyltransferase with acyl-CoA N-acyltransferase domain
1370	 52.17	0	1517027..1518088	+	353	145698259	yncB	b1449	-	predicted oxidoreductase, Zn-dependent and NAD(P)-binding
1371	 43.69	-1	1518286..1518951	+	221	90111276	yncC	b1450	-	predicted DNA-binding transcriptional regulator
1372	 51.07	0	1518987..1521089	-	700	16129410	yncD	b1451	-	predicted iron outer membrane transporter
1373	 50.66	0	1521331..1522392	+	353	16129411	yncE	b1452	-	conserved protein
1374	 52.00	0	1522505..1524004	-	499	90111277	ansP	b1453	-	L-asparagine transporter
1375	 47.41	0	1524271..1524888	+	205	16129413	yncG	b1454	-	predicted enzyme
1376	 31.46	-2	1524964..1525176	+	70	16129414	yncH	b1455	-	predicted protein
1377	 27.33	-2	1527946..1528428	+	160	16129416	ydcD	b1457	-	predicted protein
1378	 41.78	-1	1529840..1530976	+	378	16129419	ydcC	b1460	-	conserved protein
1379	 43.16	-1	1531076..1531309	+	77	16129420	pptA	b1461	-	4-oxalocrotonate tautomerase
1380	 51.23	0	1531306..1531875	-	189	90111278	yddH	b1462	-	conserved protein
1381	 51.42	0	1532048..1532893	+	281	16129422	nhoA	b1463	-	N-hydroxyarylamine O-acetyltransferase
1382	 52.01	0	1532989..1533882	-	297	16129423	yddE	b1464	-	conserved protein
1383	 52.72	0	1533961..1534641	-	226