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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1238 50.79 0 1367713..1368027 + 104 16129269 pspE b1308 - thiosulfate:cyanide sulfurtransferase (rhodanese) 1239 43.87 -1 1368240..1369919 + 559 90111247 ycjM b1309 - predicted glucosyltransferase 1240 50.04 0 1369933..1371225 + 430 16129271 ycjN b1310 - predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily 1241 53.63 0 1371246..1372127 + 293 16129272 ycjO b1311 - predicted sugar transporter subunit: membrane component of ABC superfamily 1242 52.79 0 1372114..1372956 + 280 16129273 ycjP b1312 - predicted sugar transporter subunit: membrane component of ABC superfamily 1243 55.75 0 1372987..1374039 + 350 16129274 ycjQ b1313 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 1244 53.61 0 1374058..1374846 + 262 90111248 ycjR b1314 - predicted enzyme 1245 54.73 0 1374856..1375911 + 351 16129276 ycjS b1315 - predicted oxidoreductase, NADH-binding 1246 53.75 0 1375908..1378175 + 755 16129277 ycjT b1316 - predicted hydrolase 1247 56.52 +1 1378172..1378831 + 219 16129278 ycjU b1317 - predicted beta-phosphoglucomutase 1248 49.89 0 1379971..1380876 + 301 16129280 ompG b1319 - outer membrane porin 1249 45.45 -1 1380987..1381985 - 332 16129281 ycjW b1320 - predicted DNA-binding transcriptional regulator 1250 54.43 0 1382141..1383538 + 465 16129282 ycjX b1321 - conserved protein with nucleoside triphosphate hydrolase domain 1251 56.31 +1 1383535..1384596 + 353 16129283 ycjF b1322 - conserved inner membrane protein 1252 52.14 0 1384744..1386285 + 513 16129284 tyrR b1323 - DNA-binding transcriptional dual regulator, tyrosine-binding 1253 51.28 0 1386329..1386835 - 168 16129285 tpx b1324 - lipid hydroperoxide peroxidase 1254 54.66 0 1386954..1387919 + 321 90111249 ycjG b1325 - L-Ala-D/L-Glu epimerase 1255 53.87 0 1387894..1388682 - 262 16129287 mpaA b1326 - murein peptide amidase A 1256 48.02 0 1388957..1389889 - 310 16129288 ycjY b1327 - predicted hydrolase 1257 46.56 0 1390015..1390914 + 299 16129289 ycjZ b1328 - predicted DNA-binding transcriptional regulator 1258 47.96 0 1391251..1392864 + 537 90111250 mppA b1329 - murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit 1259 43.22 -1 1392915..1393946 - 343 16129291 ynaI b1330 - conserved inner membrane protein 1260 54.67 0 1394100..1395116 + 338 16129292 insH b1331 - IS5 transposase and trans-activator 1261 45.35 -1 1395389..1395646 + 85 16129293 ynaJ b1332 - predicted inner membrane protein 1262 50.58 0 1395696..1396646 - 316 16129294 uspE b1333 - stress-induced protein 1263 51.66 0 1396798..1397550 - 250 16129295 fnr b1334 - DNA-binding transcriptional dual regulator, global regulator of anaerobic growth 1264 53.10 0 1397745..1398260 - 171 16129296 ogt b1335 - O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1265 49.25 0 1398271..1399797 - 508 90111251 abgT b1336 - predicted cryptic aminobenzoyl-glutamate transporter 1266 52.56 0 1399834..1401279 - 481 16129298 abgB b1337 - predicted peptidase, aminobenzoyl-glutamate utilization protein 1267 55.23 0 1401279..1402589 - 436 90111252 abgA b1338 - predicted peptidase, aminobenzoyl-glutamate utilization protein 1268 49.61 0 1402765..1403673 + 302 16129300 abgR b1339 - predicted DNA-binding transcriptional regulator 1269 54.26 0 1404003..1404566 + 187 16129301 ydaL b1340 - conserved protein 1270 47.69 0 1404587..1405819 - 410 90111253 ydaM b1341 - predicted diguanylate cyclase, GGDEF domain signalling protein 1271 51.93 0 1406074..1407057 + 327 16129303 ydaN b1342 - predicted Zn(II) transporter 1272 51.97 0 1407535..1408908 + 457 16129304 dbpA b1343 - ATP-dependent RNA helicase, specific for 23S rRNA 1273 48.61 0 1409037..1409972 - 311 16129305 ttcA b1344 - predicted C32 tRNA thiolase 1274 42.96 -1 1410024..1411259 - 411 16129306 intR b1345 - Rac prophage; integrase 1275 44.91 -1 1411261..1411476 - 71 90111254 ydaQ b1346 - Rac prophage; conserved protein 1276 34.76 -2 1411555..1411764 - 69 16129308 ydaC b1347 - Rac prophage; predicted protein 1277 40.51 -2 1411757..1411951 - 64 16129309 lar b1348 - Rac prophage; restriction alleviation protein 1278 47.16 0 1412008..1412817 - 269 16129310 recT b1349 - Rac prophage; recombination and repair protein 1279 49.40 0 1412810..1415410 - 866 16129311 recE b1350 - Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease 1280 39.13 -2 1415512..1415787 - 91 16129312 racC b1351 - Rac prophage; predicted protein 1281 36.84 -2 1415862..1416032 - 56 94541109 ydaE b4526 - Rac prophage; conserved protein 1282 41.89 -1 1416032..1416253 - 73 90111255 kilR b1352 - Rac prophage; inhibitor of ftsZ, killing protein 1283 37.22 -2 1416695..1417183 + 162 90111256 sieB b1353 - Rac prophage; phage superinfection exclusion protein 1284 49.36 0 1417180..1417335 - 51 94541091 ydaF b4527 - Rac prophage; predicted protein 1285 47.41 0 1417346..1417480 - 44 90111257 ydaG b1355 - Rac prophage; predicted protein 1286 41.93 -1 1417789..1418265 - 158 16129317 racR b1356 - Rac prophage; predicted DNA-binding transcriptional regulator 1287 43.43 -1 1418389..1418685 + 98 16129318 ydaS b1357 - Rac prophage; predicted DNA-binding transcriptional regulator 1288 50.83 0 1418708..1419130 + 140 16129319 ydaT b1358 - Rac prophage; predicted protein 1289 47.90 0 1419143..1420000 + 285 16129320 ydaU b1359 - Rac prophage; conserved protein 1290 52.74 0 1420007..1420753 + 248 16129321 ydaV b1360 - Rac prophage; predicted DNA replication protein 1291 56.99 +1 1421424..1421609 + 61 94541110 rzoR b4528 - Rac prophage; predicted lipoprotein 1292 38.07 -2 1421806..1423263 + 485 16129324 trkG b1363 - Rac prophage; potassium transporter subunit 1293 48.11 0 1423401..1423664 + 87 16129326 ynaK b1365 - Rac prophage; conserved protein 1294 55.45 0 1425770..1426750 - 326 16129331 insH b1370 - IS5 transposase and trans-activator 1295 53.35 0 1427073..1430435 + 1120 90111261 stfR b1372 - Rac prophage; predicted tail fiber protein 1296 48.09 0 1430435..1431010 + 191 16129334 tfaR b1373 - Rac prophage; predicted tail fiber assembly protein 1297 44.67 -1 1431108..1431698 - 196 16129335 pinR b1374 - Rac prophage; predicted site-specific recombinase 1298 33.71 -2 1432015..1432281 - 88 16129336 ynaE b1375 - Rac prophage; predicted DNA-binding transcriptional regulator 1299 48.51 0 1433209..1433643 - 144 90111262 uspF b1376 - stress-induced protein, ATP-binding protein 1300 46.65 0 1433784..1434917 - 377 16129338 ompN b1377 - outer membrane pore protein N, non-specific 1301 53.25 0 1435284..1438808 - 1174 16129339 ydbK b1378 - fused predicted pyruvate-flavodoxin oxidoreductase: conserved protein/conserved protein/FeS binding protein 1302 54.68 0 1439082..1439348 + 88 94541111 ydbJ b4529 - predicted protein 1303 46.81 0 1439345..1439767 - 140 16129340 hslJ b1379 - heat-inducible protein 1304 50.10 0 1439878..1440867 - 329 16129341 ldhA b1380 - fermentative D-lactate dehydrogenase, NAD-dependent 1305 52.12 0 1441075..1443714 + 879 16129342 ydbH b1381 - predicted protein 1306 43.01 -1 1443711..1443896 + 61 16129343 ynbE b1382 - predicted lipoprotein 1307 44.95 -1 1443904..1444230 + 108 90111263 ydbL b1383 - conserved protein 1308 48.57 0 1444402..1445307 - 301 16129345 feaR b1384 - DNA-binding transcriptional dual regulator 1309 53.40 0 1445543..1447042 + 499 90111264 feaB b1385 - phenylacetaldehyde dehydrogenase 1310 50.62 0 1447100..1449373 - 757 162135920 tynA b1386 - tyramine oxidase, copper-requiring 1311 54.20 0 1449621..1451666 - 681 16129348 maoC b1387 - fused aldehyde dehydrogenase/enoyl-CoA hydratase 1312 52.15 0 1451951..1452880 + 309 16129349 paaA b1388 - predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation 1313 49.65 0 1452892..1453179 + 95 16129350 paaB b1389 - predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation 1314 53.01 0 1453188..1453934 + 248 16129351 paaC b1390 - predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation 1315 55.75 0 1453943..1454446 + 167 145698253 paaD b1391 - predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation 1316 53.31 0 1454454..1455524 + 356 16129353 paaE b1392 - predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation 1317 54.56 0 1455521..1456288 + 255 16129354 paaF b1393 - enoyl-CoA hydratase-isomerase 1318 54.50 0 1456288..1457076 + 262 16129355 paaG b1394 - acyl-CoA hydratase 1319 53.22 0 1457078..1458505 + 475 16129356 paaH b1395 - 3-hydroxybutyryl-CoA dehydrogenase 1320 51.54 0 1458495..1458917 + 140 16129357 paaI b1396 - predicted thioesterase 1321 55.97 +1 1458917..1460122 + 401 16129358 paaJ b1397 - predicted beta-ketoadipyl CoA thiolase 1322 51.83 0 1460149..1461462 + 437 16129359 paaK b1398 - phenylacetyl-CoA ligase 1323 50.37 0 1461563..1462513 + 316 16129360 paaX b1399 - DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive 1324 50.59 0 1462495..1463085 + 196 16129361 paaY b1400 - predicted hexapeptide repeat acetyltransferase 1325 55.08 0 1465945..1466850 - 301 16129363 insD b1402 - KpLE2 phage-like element; IS2 insertion element transposase InsAB' 1326 53.01 0 1466808..1467173 - 121 145698254 insC b1403 - KpLE2 phage-like element; IS2 insertion element repressor InsA 1327 45.83 -1 1467382..1468533 + 383 16129365 insI b1404 - KpLE2 phage-like element; IS30 transposase 1328 53.08 0 1472245..1473105 + 286 16129367 ydbC b1406 - predicted oxidoreductase, NAD(P)-binding 1329 43.48 -1 1473168..1475474 + 768 90111266 ydbD b1407 - predicted protein 1330 46.53 0 1475645..1476250 + 201 90111267 ynbA b1408 - predicted inner membrane protein 1331 43.59 -1 1476250..1477146 + 298 16129370 ynbB b1409 - predicted CDP-diglyceride synthase 1332 50.91 0 1477162..1478919 + 585 16129371 ynbC b1410 - predicted hydrolase 1333 50.58 0 1478933..1480225 + 430 16129372 ynbD b1411 - predicted phosphatase, inner membrane protein 1334 51.98 0 1480279..1480884 - 201 16129373 azoR b1412 - NADH-azoreductase, FMN-dependent 1335 53.45 0 1481085..1484987 + 1300 145698255 hrpA b1413 - ATP-dependent helicase 1336 51.19 0 1485259..1486059 + 266 16129375 ydcF b1414 - conserved protein 1337 50.97 0 1486256..1487695 + 479 16129376 aldA b1415 - aldehyde dehydrogenase A, NAD-linked 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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