version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1182 49.33 0 1310944..1311687 - 247 16129216 yciC b1255 - predicted inner membrane protein 1183 50.08 0 1312044..1312682 + 212 16129217 ompW b1256 - outer membrane protein W 1184 40.63 -2 1312742..1313248 - 168 16129218 yciE b1257 - conserved protein 1185 43.11 -1 1313294..1313794 - 166 16129219 yciF b1258 - conserved protein 1186 51.11 0 1313880..1314059 - 59 90111238 yciG b1259 - predicted protein 1187 53.53 0 1314440..1315246 - 268 16129221 trpA b1260 - tryptophan synthase, alpha subunit 1188 54.69 0 1315246..1316439 - 397 16129222 trpB b1261 - tryptophan synthase, beta subunit 1189 52.83 0 1316451..1317809 - 452 90111239 trpC b1262 - fused indole-3-glycerolphosphate synthetase/N-(5-phosphoribosyl)anthranilate isomerase 1190 56.39 +1 1317813..1319408 - 531 16129224 trpD b1263 - fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase 1191 54.38 0 1319408..1320970 - 520 16129225 trpE b1264 - component I of anthranilate synthase 1192 44.44 -1 1321062..1321106 - 14 16129226 trpL b1265 - trp operon leader peptide 1193 54.08 0 1321244..1322125 + 293 16129227 trpH b1266 - conserved protein 1194 48.15 0 1322122..1322742 + 206 162135901 yciO b1267 - conserved protein 1195 46.99 0 1322770..1324665 + 631 16129229 yciQ b1268 - predicted inner membrane protein 1196 53.77 0 1324876..1325751 + 291 16129230 rluB b1269 - 23S rRNA pseudouridylate synthase 1197 50.25 0 1325791..1326381 - 196 16129231 btuR b1270 - cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1198 52.44 0 1326378..1327136 - 252 16129232 yciK b1271 - predicted oxoacyl-(acyl carrier protein) reductase, EmrKY-TolC system 1199 50.57 0 1327356..1328405 + 349 16129233 sohB b1272 - predicted inner membrane peptidase 1200 47.22 0 1328441..1328692 - 83 16129234 yciN b1273 - predicted protein 1201 51.77 0 1329072..1331669 + 865 16129235 topA b1274 - DNA topoisomerase I, omega subunit 1202 48.31 0 1331879..1332853 + 324 16129236 cysB b1275 - DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding 1203 49.61 0 1333184..1333312 + 42 94541107 ymiA b4522 - hypothetical protein 1204 45.83 -1 1333315..1333482 + 55 145698251 yciX b4523 - hypothetical protein 1205 52.91 0 1333855..1336530 + 891 16129237 acnA b1276 - aconitate hydratase 1 1206 50.08 0 1336594..1337184 - 196 16129238 ribA b1277 - GTP cyclohydrolase II 1207 50.59 0 1337354..1338118 + 254 16129239 pgpB b1278 - phosphatidylglycerophosphatase B 1208 50.16 0 1338267..1338575 + 102 16129240 yciS b1279 - conserved inner membrane protein 1209 51.88 0 1338582..1339751 + 389 16129241 yciM b1280 - conserved protein 1210 52.98 0 1339945..1340682 + 245 16129242 pyrF b1281 - orotidine-5'-phosphate decarboxylase 1211 49.85 0 1340682..1341008 + 108 90111241 yciH b1282 - conserved protein 1212 52.05 0 1341134..1341352 - 72 16129244 osmB b1283 - lipoprotein 1213 48.80 0 1341621..1342370 - 249 16129245 yciT b1284 - predicted DNA-binding transcriptional regulator 1214 47.70 0 1342460..1342633 - 57 145698252 yciZ b4596 - hypothetical protein 1215 48.49 0 1342781..1344766 - 661 16129246 gmr b1285 - modulator of Rnase II stability 1216 53.23 0 1345002..1346936 - 644 16129247 rnb b1286 - ribonuclease II 1217 50.80 0 1347004..1348131 - 375 90111242 yciW b1287 - predicted oxidoreductase 1218 53.23 0 1348275..1349063 - 262 16129249 fabI b1288 - enoyl-[acyl-carrier-protein] reductase, NADH-dependent 1219 49.72 0 1349431..1349784 - 117 16129250 ycjD b1289 - conserved protein 1220 51.18 0 1349852..1350658 - 268 16129251 sapF b1290 - predicted antimicrobial peptide transporter subunit 1221 51.36 0 1350660..1351652 - 330 16129252 sapD b1291 - predicted antimicrobial peptide transporter subunit 1222 56.90 +1 1351652..1352542 - 296 16129253 sapC b1292 - predicted antimicrobial peptide transporter subunit 1223 51.45 0 1352529..1353494 - 321 16129254 sapB b1293 - predicted antimicrobial peptide transporter subunit 1224 54.26 0 1353491..1355134 - 547 16129255 sapA b1294 - predicted antimicrobial peptide transporter subunit 1225 48.37 0 1355447..1355692 - 81 16129256 ymjA b1295 - predicted protein 1226 53.32 0 1355826..1357211 - 461 90111243 puuP b1296 - putrescine importer 1227 53.49 0 1357514..1358932 - 472 90111244 puuA b1297 - gamma-Glu-putrescine synthase 1228 52.29 0 1359144..1359908 + 254 90111245 puuD b1298 - gamma-Glu-GABA hydrolase 1229 50.90 0 1359935..1360492 + 185 16129260 puuR b1299 - DNA-binding transcriptional repressor 1230 57.33 +1 1360767..1362254 + 495 16129261 puuC b1300 - gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent 1231 58.24 +1 1362256..1363536 + 426 16129262 puuB b1301 - gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding 1232 57.66 +1 1363574..1364839 + 421 16129263 puuE b1302 - GABA aminotransferase, PLP-dependent 1233 51.74 0 1364959..1365936 - 325 90111246 pspF b1303 - DNA-binding transcriptional activator 1234 49.33 0 1366103..1366771 + 222 16129265 pspA b1304 - regulatory protein for phage-shock-protein operon 1235 47.56 0 1366825..1367049 + 74 16129266 pspB b1305 - DNA-binding transcriptional regulator of psp operon 1236 50.28 0 1367049..1367408 + 119 16129267 pspC b1306 - DNA-binding transcriptional activator 1237 54.50 0 1367417..1367638 + 73 16129268 pspD b1307 - peripheral inner membrane phage-shock protein 1238 50.79 0 1367713..1368027 + 104 16129269 pspE b1308 - thiosulfate:cyanide sulfurtransferase (rhodanese) 1239 43.87 -1 1368240..1369919 + 559 90111247 ycjM b1309 - predicted glucosyltransferase 1240 50.04 0 1369933..1371225 + 430 16129271 ycjN b1310 - predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily 1241 53.63 0 1371246..1372127 + 293 16129272 ycjO b1311 - predicted sugar transporter subunit: membrane component of ABC superfamily 1242 52.79 0 1372114..1372956 + 280 16129273 ycjP b1312 - predicted sugar transporter subunit: membrane component of ABC superfamily 1243 55.75 0 1372987..1374039 + 350 16129274 ycjQ b1313 - predicted oxidoreductase, Zn-dependent and NAD(P)-binding 1244 53.61 0 1374058..1374846 + 262 90111248 ycjR b1314 - predicted enzyme 1245 54.73 0 1374856..1375911 + 351 16129276 ycjS b1315 - predicted oxidoreductase, NADH-binding 1246 53.75 0 1375908..1378175 + 755 16129277 ycjT b1316 - predicted hydrolase 1247 56.52 +1 1378172..1378831 + 219 16129278 ycjU b1317 - predicted beta-phosphoglucomutase 1248 49.89 0 1379971..1380876 + 301 16129280 ompG b1319 - outer membrane porin 1249 45.45 -1 1380987..1381985 - 332 16129281 ycjW b1320 - predicted DNA-binding transcriptional regulator 1250 54.43 0 1382141..1383538 + 465 16129282 ycjX b1321 - conserved protein with nucleoside triphosphate hydrolase domain 1251 56.31 +1 1383535..1384596 + 353 16129283 ycjF b1322 - conserved inner membrane protein 1252 52.14 0 1384744..1386285 + 513 16129284 tyrR b1323 - DNA-binding transcriptional dual regulator, tyrosine-binding 1253 51.28 0 1386329..1386835 - 168 16129285 tpx b1324 - lipid hydroperoxide peroxidase 1254 54.66 0 1386954..1387919 + 321 90111249 ycjG b1325 - L-Ala-D/L-Glu epimerase 1255 53.87 0 1387894..1388682 - 262 16129287 mpaA b1326 - murein peptide amidase A 1256 48.02 0 1388957..1389889 - 310 16129288 ycjY b1327 - predicted hydrolase 1257 46.56 0 1390015..1390914 + 299 16129289 ycjZ b1328 - predicted DNA-binding transcriptional regulator 1258 47.96 0 1391251..1392864 + 537 90111250 mppA b1329 - murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit 1259 43.22 -1 1392915..1393946 - 343 16129291 ynaI b1330 - conserved inner membrane protein 1260 54.67 0 1394100..1395116 + 338 16129292 insH b1331 - IS5 transposase and trans-activator 1261 45.35 -1 1395389..1395646 + 85 16129293 ynaJ b1332 - predicted inner membrane protein 1262 50.58 0 1395696..1396646 - 316 16129294 uspE b1333 - stress-induced protein 1263 51.66 0 1396798..1397550 - 250 16129295 fnr b1334 - DNA-binding transcriptional dual regulator, global regulator of anaerobic growth 1264 53.10 0 1397745..1398260 - 171 16129296 ogt b1335 - O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1265 49.25 0 1398271..1399797 - 508 90111251 abgT b1336 - predicted cryptic aminobenzoyl-glutamate transporter 1266 52.56 0 1399834..1401279 - 481 16129298 abgB b1337 - predicted peptidase, aminobenzoyl-glutamate utilization protein 1267 55.23 0 1401279..1402589 - 436 90111252 abgA b1338 - predicted peptidase, aminobenzoyl-glutamate utilization protein 1268 49.61 0 1402765..1403673 + 302 16129300 abgR b1339 - predicted DNA-binding transcriptional regulator 1269 54.26 0 1404003..1404566 + 187 16129301 ydaL b1340 - conserved protein 1270 47.69 0 1404587..1405819 - 410 90111253 ydaM b1341 - predicted diguanylate cyclase, GGDEF domain signalling protein 1271 51.93 0 1406074..1407057 + 327 16129303 ydaN b1342 - predicted Zn(II) transporter 1272 51.97 0 1407535..1408908 + 457 16129304 dbpA b1343 - ATP-dependent RNA helicase, specific for 23S rRNA 1273 48.61 0 1409037..1409972 - 311 16129305 ttcA b1344 - predicted C32 tRNA thiolase 1274 42.96 -1 1410024..1411259 - 411 16129306 intR b1345 - Rac prophage; integrase 1275 44.91 -1 1411261..1411476 - 71 90111254 ydaQ b1346 - Rac prophage; conserved protein 1276 34.76 -2 1411555..1411764 - 69 16129308 ydaC b1347 - Rac prophage; predicted protein 1277 40.51 -2 1411757..1411951 - 64 16129309 lar b1348 - Rac prophage; restriction alleviation protein 1278 47.16 0 1412008..1412817 - 269 16129310 recT b1349 - Rac prophage; recombination and repair protein 1279 49.40 0 1412810..1415410 - 866 16129311 recE b1350 - Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease 1280 39.13 -2 1415512..1415787 - 91 16129312 racC b1351 - Rac prophage; predicted protein 1281 36.84 -2 1415862..1416032 - 56 94541109 ydaE b4526 - Rac prophage; conserved protein 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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