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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1124 52.30 0 1244902..1246599 - 565 16129160 treA b1197 - periplasmic trehalase 1125 50.21 0 1246919..1248340 - 473 145698246 dhaM b1198 - fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component 1126 53.55 0 1248348..1248980 - 210 16129162 dhaL b1199 - dihydroxyacetone kinase, C-terminal domain 1127 53.03 0 1248991..1250061 - 356 162135900 dhaK b1200 - dihydroxyacetone kinase, N-terminal domain 1128 51.46 0 1250289..1252208 + 639 90111234 dhaR b1201 - predicted DNA-binding transcriptional regulator, dihydroxyacetone 1129 49.79 0 1252308..1255175 - 955 16129165 ycgV b1202 - predicted adhesin 1130 51.01 0 1255944..1257035 - 363 16129166 ychF b1203 - predicted GTP-binding protein 1131 49.74 0 1257152..1257736 - 194 16129167 pth b1204 - peptidyl-tRNA hydrolase 1132 53.05 0 1258014..1258292 + 92 16129168 ychH b1205 - predicted inner membrane protein 1133 54.64 0 1258347..1260026 - 559 90111235 ychM b1206 - predicted transporter 1134 52.53 0 1260151..1261098 - 315 16129170 prs b1207 - phosphoribosylpyrophosphate synthase 1135 53.40 0 1261249..1262100 - 283 16129171 ispE b1208 - 4-diphosphocytidyl-2-C-methylerythritol kinase 1136 51.44 0 1262100..1262723 - 207 16129172 lolB b1209 - chaperone for lipoproteins 1137 54.34 0 1262937..1264193 + 418 16129173 hemA b1210 - glutamyl tRNA reductase 1138 53.00 0 1264235..1265317 + 360 16129174 prfA b1211 - peptide chain release factor RF-1 1139 55.16 0 1265317..1266150 + 277 16129175 prmC b1212 - N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 1140 47.58 0 1266147..1266539 + 130 16129176 ychQ b1213 - predicted transcriptional regulator 1141 46.42 0 1266543..1267352 + 269 16129177 ychA b1214 - predicted transcriptional regulator 1142 51.58 0 1267388..1268242 + 284 16129178 kdsA b1215 - 3-deoxy-D-manno-octulosonate 8-phosphate synthase 1143 55.56 0 1268391..1268498 - 35 49176087 ldrA b4419 - toxic polypeptide, small 1144 58.33 +1 1268926..1269033 - 35 49176088 ldrB b4421 - toxic polypeptide, small 1145 55.56 0 1269461..1269568 - 35 49176089 ldrC b4423 - toxic polypeptide, small 1146 48.77 0 1269972..1271072 - 366 16129179 chaA b1216 - calcium/sodium:proton antiporter 1147 45.45 -1 1271342..1271572 + 76 16129180 chaB b1217 - predicted cation regulator 1148 54.74 0 1271730..1272425 + 231 145698247 chaC b1218 - regulatory protein for cation transport 1149 51.69 0 1272469..1272822 - 117 16129182 ychN b1219 - conserved protein 1150 50.54 0 1273007..1274401 + 464 145698248 ychO b1220 - predicted invasin 1151 51.77 0 1274402..1275052 - 216 16129184 narL b1221 - DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) 1152 53.37 0 1275045..1276841 - 598 16129185 narX b1222 - sensory histidine kinase in two-component regulatory system with NarL 1153 53.66 0 1277180..1278571 + 463 16129186 narK b1223 - nitrate/nitrite transporter 1154 54.94 0 1279087..1282830 + 1247 16129187 narG b1224 - nitrate reductase 1, alpha subunit 1155 53.74 0 1282827..1284365 + 512 16129188 narH b1225 - nitrate reductase 1, beta (Fe-S) subunit 1156 56.40 +1 1284362..1285072 + 236 16129189 narJ b1226 - molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 1157 55.90 0 1285072..1285749 + 225 16129190 narI b1227 - nitrate reductase 1, gamma (cytochrome b(NR)) subunit 1158 59.42 +1 1285932..1286207 + 91 16129191 ychS b1228 - predicted protein 1159 64.44 +2 1286310..1286399 - 29 145698249 tpr b1229 - predicted protamine-like protein 1160 47.21 0 1287005..1287847 - 280 16129193 purU b1232 - formyltetrahydrofolate hydrolase 1161 46.41 0 1287897..1288355 - 152 16129194 ychJ b1233 - conserved protein 1162 50.26 0 1288429..1289373 + 314 16129195 rssA b1234 - conserved protein 1163 48.62 0 1289465..1290478 + 337 16129196 rssB b1235 - response regulator of RpoS 1164 46.97 0 1290680..1291588 + 302 16129197 galU b1236 - glucose-1-phosphate uridylyltransferase 1165 46.62 0 1291732..1292145 - 137 16129198 hns b1237 - global DNA-binding transcriptional dual regulator H-NS 1166 42.23 -1 1292750..1293367 + 205 16129199 tdk b1238 - thymidine kinase/deoxyuridine kinase 1167 50.64 0 1294669..1297344 - 891 16129202 adhE b1241 - fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase 1168 47.84 0 1297821..1298468 + 215 16129203 ychE b1242 - predicted inner membrane protein 1169 47.73 0 1299206..1300837 + 543 16129204 oppA b1243 - oligopeptide transporter subunit 1170 45.71 -1 1300923..1301843 + 306 16129205 oppB b1244 - oligopeptide transporter subunit 1171 52.37 0 1301858..1302766 + 302 16129206 oppC b1245 - oligopeptide transporter subunit 1172 51.78 0 1302778..1303791 + 337 49176090 oppD b1246 - oligopeptide transporter subunit 1173 51.54 0 1303788..1304792 + 334 16129208 oppF b1247 - oligopeptide transporter subunit 1174 47.27 0 1304845..1305174 - 109 90111236 yciU b1248 - predicted protein 1175 51.68 0 1305209..1306669 - 486 16129210 cls b1249 - cardiolipin synthase 1 1176 50.57 0 1306812..1306985 + 57 145698250 yciY b4595 - hypothetical protein 1177 42.34 -1 1307040..1308293 - 417 16129211 kch b1250 - voltage-gated potassium channel 1178 48.82 0 1308593..1308889 - 98 90111237 yciI b1251 - predicted enzyme 1179 54.44 0 1309113..1309832 + 239 16129213 tonB b1252 - membrane spanning protein in TonB-ExbB-ExbD complex 1180 48.37 0 1309872..1310270 - 132 16129214 yciA b1253 - predicted hydrolase 1181 46.48 0 1310375..1310914 - 179 16129215 yciB b1254 - predicted inner membrane protein 1182 49.33 0 1310944..1311687 - 247 16129216 yciC b1255 - predicted inner membrane protein 1183 50.08 0 1312044..1312682 + 212 16129217 ompW b1256 - outer membrane protein W 1184 40.63 -2 1312742..1313248 - 168 16129218 yciE b1257 - conserved protein 1185 43.11 -1 1313294..1313794 - 166 16129219 yciF b1258 - conserved protein 1186 51.11 0 1313880..1314059 - 59 90111238 yciG b1259 - predicted protein 1187 53.53 0 1314440..1315246 - 268 16129221 trpA b1260 - tryptophan synthase, alpha subunit 1188 54.69 0 1315246..1316439 - 397 16129222 trpB b1261 - tryptophan synthase, beta subunit 1189 52.83 0 1316451..1317809 - 452 90111239 trpC b1262 - fused indole-3-glycerolphosphate synthetase/N-(5-phosphoribosyl)anthranilate isomerase 1190 56.39 +1 1317813..1319408 - 531 16129224 trpD b1263 - fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase 1191 54.38 0 1319408..1320970 - 520 16129225 trpE b1264 - component I of anthranilate synthase 1192 44.44 -1 1321062..1321106 - 14 16129226 trpL b1265 - trp operon leader peptide 1193 54.08 0 1321244..1322125 + 293 16129227 trpH b1266 - conserved protein 1194 48.15 0 1322122..1322742 + 206 162135901 yciO b1267 - conserved protein 1195 46.99 0 1322770..1324665 + 631 16129229 yciQ b1268 - predicted inner membrane protein 1196 53.77 0 1324876..1325751 + 291 16129230 rluB b1269 - 23S rRNA pseudouridylate synthase 1197 50.25 0 1325791..1326381 - 196 16129231 btuR b1270 - cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1198 52.44 0 1326378..1327136 - 252 16129232 yciK b1271 - predicted oxoacyl-(acyl carrier protein) reductase, EmrKY-TolC system 1199 50.57 0 1327356..1328405 + 349 16129233 sohB b1272 - predicted inner membrane peptidase 1200 47.22 0 1328441..1328692 - 83 16129234 yciN b1273 - predicted protein 1201 51.77 0 1329072..1331669 + 865 16129235 topA b1274 - DNA topoisomerase I, omega subunit 1202 48.31 0 1331879..1332853 + 324 16129236 cysB b1275 - DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding 1203 49.61 0 1333184..1333312 + 42 94541107 ymiA b4522 - hypothetical protein 1204 45.83 -1 1333315..1333482 + 55 145698251 yciX b4523 - hypothetical protein 1205 52.91 0 1333855..1336530 + 891 16129237 acnA b1276 - aconitate hydratase 1 1206 50.08 0 1336594..1337184 - 196 16129238 ribA b1277 - GTP cyclohydrolase II 1207 50.59 0 1337354..1338118 + 254 16129239 pgpB b1278 - phosphatidylglycerophosphatase B 1208 50.16 0 1338267..1338575 + 102 16129240 yciS b1279 - conserved inner membrane protein 1209 51.88 0 1338582..1339751 + 389 16129241 yciM b1280 - conserved protein 1210 52.98 0 1339945..1340682 + 245 16129242 pyrF b1281 - orotidine-5'-phosphate decarboxylase 1211 49.85 0 1340682..1341008 + 108 90111241 yciH b1282 - conserved protein 1212 52.05 0 1341134..1341352 - 72 16129244 osmB b1283 - lipoprotein 1213 48.80 0 1341621..1342370 - 249 16129245 yciT b1284 - predicted DNA-binding transcriptional regulator 1214 47.70 0 1342460..1342633 - 57 145698252 yciZ b4596 - hypothetical protein 1215 48.49 0 1342781..1344766 - 661 16129246 gmr b1285 - modulator of Rnase II stability 1216 53.23 0 1345002..1346936 - 644 16129247 rnb b1286 - ribonuclease II 1217 50.80 0 1347004..1348131 - 375 90111242 yciW b1287 - predicted oxidoreductase 1218 53.23 0 1348275..1349063 - 262 16129249 fabI b1288 - enoyl-[acyl-carrier-protein] reductase, NADH-dependent 1219 49.72 0 1349431..1349784 - 117 16129250 ycjD b1289 - conserved protein 1220 51.18 0 1349852..1350658 - 268 16129251 sapF b1290 - predicted antimicrobial peptide transporter subunit 1221 51.36 0 1350660..1351652 - 330 16129252 sapD b1291 - predicted antimicrobial peptide transporter subunit 1222 56.90 +1 1351652..1352542 - 296 16129253 sapC b1292 - predicted antimicrobial peptide transporter subunit 1223 51.45 0 1352529..1353494 - 321 16129254 sapB b1293 - predicted antimicrobial peptide transporter subunit 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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