version 1.0
Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1058 49.88 0 1185067..1186293 + 408 16129090 pepT b1127 - peptidase T 1059 54.01 0 1186342..1187463 - 373 90111217 ycfD b1128 - conserved protein 1060 51.33 0 1187539..1188999 - 486 16129092 phoQ b1129 - sensory histidine kinase in two-compoent regulatory system with PhoP 1061 47.77 0 1188999..1189670 - 223 16129093 phoP b1130 - DNA-binding response regulator in two-component regulatory system with PhoQ 1062 52.30 0 1189839..1191209 - 456 16129094 purB b1131 - adenylosuccinate lyase 1063 57.17 +1 1191213..1191854 - 213 16129095 hflD b1132 - predicted lysogenization regulator 1064 53.75 0 1191890..1192996 - 368 90111218 mnmA b1133 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1065 50.22 0 1193050..1193511 - 153 16129097 nudJ b1134 - bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase 1066 51.22 0 1193521..1194174 - 217 162135898 rluE b1135 - 23S rRNA pseudouridine synthase 1067 50.20 0 1194346..1195596 + 416 16129099 icd b1136 - e14 prophage; isocitrate dehydrogenase, specific for NADP+ 1068 34.83 -2 1196090..1196755 - 221 16129100 ymfD b1137 - e14 prophage; predicted SAM-dependent methyltransferase 1069 30.92 -2 1196756..1197460 - 234 16129101 ymfE b1138 - e14 prophage; predicted inner membrane protein 1070 36.80 -2 1197918..1198811 + 297 16129102 lit b1139 - e14 prophage; cell death peptidase, inhibitor of T4 late gene expression 1071 44.77 -1 1198902..1200029 - 375 16129103 intE b1140 - e14 prophage; predicted integrase 1072 44.31 -1 1200010..1200255 - 81 16129104 xisE b1141 - e14 prophage; predicted excisionase 1073 38.60 -2 1200720..1201061 + 113 90111220 ymfI b1143 - e14 prophage; predicted protein 1074 46.93 0 1200999..1201307 - 102 90111221 ymfJ b1144 - e14 prophage; predicted protein 1075 44.44 -1 1201482..1202156 - 224 16129108 ymfK b1145 - e14 prophage; repressor protein phage e14 1076 42.79 -1 1202247..1202447 + 66 90111222 ymfT b1146 - e14 prophage; predicted DNA-binding transcriptional regulator 1077 49.64 0 1202491..1203048 + 185 145698241 ymfL b1147 - e14 prophage; predicted DNA-binding transcriptional regulator 1078 49.85 0 1203045..1203383 + 112 16129111 ymfM b1148 - e14 prophage; predicted protein 1079 54.31 0 1203393..1204760 + 455 16129112 ymfN b1149 - e14 prophage; predicted DNA-binding transcriptional regulator 1080 60.11 +1 1204772..1204954 + 60 16129113 ymfR b1150 - e14 prophage; predicted protein 1081 57.26 +1 1206136..1206720 + 194 16129116 ymfQ b1153 - e14 prophage; conserved protein 1082 50.32 0 1206724..1207353 + 209 16129117 ycfK b1154 - e14 prophage; predicted protein 1083 42.03 -1 1207355..1207768 + 137 16129118 ymfS b1155 - e14 prophage; predicted protein 1084 47.76 0 1207740..1208342 - 200 16129119 tfaE b1156 - e14 prophage; predicted tail fiber assembly protein 1085 48.83 0 1208908..1209462 + 184 16129121 pinE b1158 - e14 prophage; site-specific DNA recombinase 1086 38.37 -2 1209569..1210402 + 277 16129122 mcrA b1159 - e14 prophage; 5-methylcytosine-specific restriction endonuclease B 1087 33.95 -2 1210903..1211226 - 107 16129123 elbA b1160 - predicted protein 1088 36.79 -2 1211926..1212330 - 134 16129124 ycgX b1161 - predicted protein 1089 48.77 0 1212551..1213282 - 243 16129125 ycgE b1162 - predicted DNA-binding transcriptional regulator 1090 43.56 -1 1213487..1214698 - 403 16129126 ycgF b1163 - predicted FAD-binding phosphodiesterase 1091 41.77 -1 1215012..1215248 + 78 16129127 ycgZ b1164 - predicted protein 1092 37.00 -2 1215291..1215563 + 90 16129128 ymgA b1165 - predicted protein 1093 34.83 -2 1215592..1215858 + 88 16129129 ariR b1166 - predicted protein 1094 35.74 -2 1215971..1216219 + 82 16129130 ymgC b1167 - predicted protein 1095 44.62 -1 1216551..1218074 + 507 90111225 ycgG b1168 - conserved inner membrane protein 1096 40.18 -2 1218206..1218424 + 72 94541105 ymgF b4520 - predicted protein 1097 45.15 -1 1221528..1221857 - 109 90111226 ymgD b1171 - predicted protein 1098 53.33 0 1221867..1222151 - 94 145698242 ymgG b1172 - predicted protein 1099 32.18 -2 1222213..1222386 - 57 145698243 ymgI b4593 - hypothetical protein 1100 38.17 -2 1222487..1222672 + 61 145698244 ymgJ b4594 - hypothetical protein 1101 43.45 -1 1223502..1223768 - 88 16129137 minE b1174 - cell division topological specificity factor 1102 49.94 0 1223772..1224584 - 270 16129138 minD b1175 - membrane ATPase of the MinC-MinD-MinE system 1103 51.01 0 1224608..1225303 - 231 16129139 minC b1176 - cell division inhibitor 1104 42.28 -1 1225823..1226191 + 122 16129140 ycgJ b1177 - predicted protein 1105 43.03 -1 1226294..1226695 - 133 16129141 ycgK b1178 - predicted protein 1106 43.12 -1 1226904..1227230 + 108 49176083 ycgL b1179 - conserved protein 1107 51.97 0 1227302..1227961 + 219 16129143 ycgM b1180 - predicted isomerase/hydrolase 1108 47.62 0 1228038..1228499 + 153 145698245 ycgN b1181 - conserved protein 1109 41.12 -2 1228706..1229617 - 303 162135899 hlyE b1182 - hemolysin E 1110 48.10 0 1229990..1230409 + 139 16129146 umuD b1183 - DNA polymerase V, subunit D 1111 50.99 0 1230409..1231677 + 422 16129147 umuC b1184 - DNA polymerase V, subunit C 1112 52.73 0 1231723..1232253 - 176 49176085 dsbB b1185 - oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I 1113 52.85 0 1232399..1233940 - 513 16129149 nhaB b1186 - sodium:proton antiporter 1114 51.25 0 1234161..1234880 + 239 16129150 fadR b1187 - DNA-binding transcriptional dual regulator of fatty acid metabolism 1115 49.84 0 1234932..1236464 - 510 16129151 ycgB b1188 - conserved protein 1116 56.27 +1 1236794..1238092 + 432 16129152 dadA b1189 - D-amino acid dehydrogenase 1117 57.98 +1 1238102..1239172 + 356 16129153 dadX b1190 - alanine racemase 2, PLP-binding 1118 52.33 0 1239558..1241294 - 578 90111230 cvrA b1191 - predicted cation/proton antiporter 1119 53.01 0 1241389..1242303 - 304 16129155 ldcA b1192 - L,D-carboxypeptidase A 1120 51.96 0 1242403..1243014 + 203 90111231 emtA b1193 - lytic murein endotransglycosylase E 1121 50.75 0 1243016..1243750 - 244 16129157 ycgR b1194 - protein involved in flagellar function 1122 53.33 0 1243951..1244205 + 84 16129158 ymgE b1195 - predicted inner membrane protein 1123 41.50 -2 1244383..1244823 + 146 16129159 ycgY b1196 - predicted protein 1124 52.30 0 1244902..1246599 - 565 16129160 treA b1197 - periplasmic trehalase 1125 50.21 0 1246919..1248340 - 473 145698246 dhaM b1198 - fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component 1126 53.55 0 1248348..1248980 - 210 16129162 dhaL b1199 - dihydroxyacetone kinase, C-terminal domain 1127 53.03 0 1248991..1250061 - 356 162135900 dhaK b1200 - dihydroxyacetone kinase, N-terminal domain 1128 51.46 0 1250289..1252208 + 639 90111234 dhaR b1201 - predicted DNA-binding transcriptional regulator, dihydroxyacetone 1129 49.79 0 1252308..1255175 - 955 16129165 ycgV b1202 - predicted adhesin 1130 51.01 0 1255944..1257035 - 363 16129166 ychF b1203 - predicted GTP-binding protein 1131 49.74 0 1257152..1257736 - 194 16129167 pth b1204 - peptidyl-tRNA hydrolase 1132 53.05 0 1258014..1258292 + 92 16129168 ychH b1205 - predicted inner membrane protein 1133 54.64 0 1258347..1260026 - 559 90111235 ychM b1206 - predicted transporter 1134 52.53 0 1260151..1261098 - 315 16129170 prs b1207 - phosphoribosylpyrophosphate synthase 1135 53.40 0 1261249..1262100 - 283 16129171 ispE b1208 - 4-diphosphocytidyl-2-C-methylerythritol kinase 1136 51.44 0 1262100..1262723 - 207 16129172 lolB b1209 - chaperone for lipoproteins 1137 54.34 0 1262937..1264193 + 418 16129173 hemA b1210 - glutamyl tRNA reductase 1138 53.00 0 1264235..1265317 + 360 16129174 prfA b1211 - peptide chain release factor RF-1 1139 55.16 0 1265317..1266150 + 277 16129175 prmC b1212 - N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 1140 47.58 0 1266147..1266539 + 130 16129176 ychQ b1213 - predicted transcriptional regulator 1141 46.42 0 1266543..1267352 + 269 16129177 ychA b1214 - predicted transcriptional regulator 1142 51.58 0 1267388..1268242 + 284 16129178 kdsA b1215 - 3-deoxy-D-manno-octulosonate 8-phosphate synthase 1143 55.56 0 1268391..1268498 - 35 49176087 ldrA b4419 - toxic polypeptide, small 1144 58.33 +1 1268926..1269033 - 35 49176088 ldrB b4421 - toxic polypeptide, small 1145 55.56 0 1269461..1269568 - 35 49176089 ldrC b4423 - toxic polypeptide, small 1146 48.77 0 1269972..1271072 - 366 16129179 chaA b1216 - calcium/sodium:proton antiporter 1147 45.45 -1 1271342..1271572 + 76 16129180 chaB b1217 - predicted cation regulator 1148 54.74 0 1271730..1272425 + 231 145698247 chaC b1218 - regulatory protein for cation transport 1149 51.69 0 1272469..1272822 - 117 16129182 ychN b1219 - conserved protein 1150 50.54 0 1273007..1274401 + 464 145698248 ychO b1220 - predicted invasin 1151 51.77 0 1274402..1275052 - 216 16129184 narL b1221 - DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) 1152 53.37 0 1275045..1276841 - 598 16129185 narX b1222 - sensory histidine kinase in two-component regulatory system with NarL 1153 53.66 0 1277180..1278571 + 463 16129186 narK b1223 - nitrate/nitrite transporter 1154 54.94 0 1279087..1282830 + 1247 16129187 narG b1224 - nitrate reductase 1, alpha subunit 1155 53.74 0 1282827..1284365 + 512 16129188 narH b1225 - nitrate reductase 1, beta (Fe-S) subunit 1156 56.40 +1 1284362..1285072 + 236 16129189 narJ b1226 - molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 1157 55.90 0 1285072..1285749 + 225 16129190 narI b1227 - nitrate reductase 1, gamma (cytochrome b(NR)) subunit 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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