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Escherichia coli str. K-12 substr. MG1655, complete genome - 1..4639675 4132 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 987 47.40 0 1117124..1117699 - 191 16129019 yceI b1056 - predicted protein 988 51.15 0 1117703..1118269 - 188 16129020 yceJ b1057 - predicted cytochrome b561 989 37.59 -2 1118530..1118670 - 46 16129021 yceO b1058 - predicted protein 990 52.46 0 1118691..1119809 - 372 16129022 solA b1059 - N-methyltryptophan oxidase, FAD-binding 991 45.10 -1 1119924..1120178 - 84 49176074 bssS b1060 - predicted protein 992 47.97 0 1120465..1120710 - 81 16129024 dinI b1061 - DNA damage-inducible protein I 993 53.10 0 1120784..1121830 - 348 16129025 pyrC b1062 - dihydro-orotase 994 46.88 0 1121936..1122496 - 186 16129026 yceB b1063 - predicted lipoprotein 995 49.07 0 1122630..1123277 - 215 16129027 grxB b1064 - glutaredoxin 2 (Grx2) 996 55.33 0 1123341..1124549 - 402 90111209 mdtH b1065 - predicted drug efflux system 997 49.40 0 1124785..1125369 + 194 16129029 rimJ b1066 - ribosomal-protein-S5-alanine N-acetyltransferase 998 51.85 0 1125380..1126027 + 215 16129030 yceH b1067 - conserved protein 999 55.30 0 1126029..1126952 + 307 16129031 yceM b1068 - predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain 1000 53.71 0 1127062..1128597 + 511 16129032 yceN b1069 - predicted inner membrane protein 1001 48.20 0 1128637..1129053 - 138 16129033 flgN b1070 - export chaperone for FlgK and FlgL 1002 52.72 0 1129058..1129351 - 97 16129034 flgM b1071 - anti-sigma factor for FliA (sigma 28) 1003 52.27 0 1129427..1130086 - 219 16129035 flgA b1072 - assembly protein for flagellar basal-body periplasmic P ring 1004 53.48 0 1130241..1130657 + 138 16129036 flgB b1073 - flagellar component of cell-proximal portion of basal-body rod 1005 52.84 0 1130661..1131065 + 134 16129037 flgC b1074 - flagellar component of cell-proximal portion of basal-body rod 1006 54.60 0 1131077..1131772 + 231 16129038 flgD b1075 - flagellar hook assembly protein 1007 51.53 0 1131797..1133005 + 402 16129039 flgE b1076 - flagellar hook protein 1008 59.13 +1 1133025..1133780 + 251 16129040 flgF b1077 - flagellar component of cell-proximal portion of basal-body rod 1009 53.77 0 1133952..1134734 + 260 16129041 flgG b1078 - flagellar component of cell-distal portion of basal-body rod 1010 53.51 0 1134787..1135485 + 232 16129042 flgH b1079 - flagellar protein of basal-body outer-membrane L ring 1011 54.19 0 1135497..1136594 + 365 49176076 flgI b1080 - predicted flagellar basal body protein 1012 54.67 0 1136594..1137535 + 313 16129044 flgJ b1081 - muramidase 1013 51.82 0 1137601..1139244 + 547 16129045 flgK b1082 - flagellar hook-filament junction protein 1 1014 50.73 0 1139256..1140209 + 317 16129046 flgL b1083 - flagellar hook-filament junction protein 1015 55.65 0 1140405..1143590 - 1061 16129047 rne b1084 - fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein 1016 44.55 -1 1143725..1144045 + 106 90111210 yceQ b1085 - predicted protein 1017 51.46 0 1144163..1145122 + 319 16129049 rluC b1086 - 23S rRNA pseudouridylate synthase 1018 50.09 0 1145234..1145818 - 194 90111211 yceF b1087 - predicted protein 1019 49.62 0 1146017..1146538 + 173 16129051 yceD b1088 - conserved protein 1020 54.02 0 1146590..1146763 + 57 16129052 rpmF b1089 - 50S ribosomal subunit protein L32 1021 52.10 0 1146844..1147914 + 356 90111212 plsX b1090 - fatty acid/phospholipid synthesis protein 1022 54.72 0 1147982..1148935 + 317 16129054 fabH b1091 - 3-oxoacyl-[acyl-carrier-protein] synthase III 1023 55.16 0 1148951..1149880 + 309 16129055 fabD b1092 - malonyl-CoA-[acyl-carrier-protein] transacylase 1024 51.56 0 1149893..1150627 + 244 16129056 fabG b1093 - 3-oxoacyl-[acyl-carrier-protein] reductase 1025 48.10 0 1150838..1151074 + 78 16129057 acpP b1094 - acyl carrier protein (ACP) 1026 53.30 0 1151162..1152403 + 413 16129058 fabF b1095 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1027 50.62 0 1152523..1153332 + 269 16129059 pabC b1096 - 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex 1028 50.73 0 1153335..1154357 + 340 16129060 yceG b1097 - predicted aminodeoxychorismate lyase 1029 54.05 0 1154347..1154988 + 213 16129061 tmk b1098 - thymidylate kinase 1030 54.03 0 1154985..1155989 + 334 16129062 holB b1099 - DNA polymerase III, delta prime subunit 1031 50.88 0 1156000..1156797 + 265 16129063 ycfH b1100 - predicted metallodependent hydrolase 1032 52.65 0 1157092..1158525 + 477 16129064 ptsG b1101 - fused glucose-specific PTS enzymes: IIB component/IIC component 1033 50.00 0 1158585..1160774 - 729 16129065 fhuE b1102 - ferric-rhodotorulic acid outer membrane transporter 1034 50.56 0 1161108..1161467 + 119 49176077 hinT b1103 - purine nucleoside phosphoramidase 1035 49.47 0 1161470..1161847 + 125 16129067 ycfL b1104 - predicted protein 1036 56.39 +1 1161861..1162502 + 213 16129068 ycfM b1105 - predicted outer membrane lipoprotein 1037 53.33 0 1162483..1163307 + 274 16129069 thiK b1106 - thiamin kinase 1038 53.02 0 1163318..1164343 + 341 16129070 nagZ b1107 - beta N-acetyl-glucosaminidase 1039 46.59 0 1164366..1164908 + 180 90111213 ycfP b1108 - conserved protein 1040 52.95 0 1165308..1166612 + 434 16129072 ndh b1109 - respiratory NADH dehydrogenase 2/cupric reductase 1041 53.70 0 1166822..1167361 + 179 16129073 ycfJ b1110 - predicted protein 1042 51.18 0 1167423..1168055 - 210 90111214 ycfQ b1111 - predicted DNA-binding transcriptional regulator 1043 47.29 0 1168296..1168553 + 85 16129075 bhsA b1112 - predicted protein 1044 53.27 0 1168635..1169597 - 320 16129076 ycfS b1113 - conserved protein 1045 54.77 0 1169741..1173187 - 1148 16129077 mfd b1114 - transcription-repair coupling factor 1046 49.53 0 1173315..1174388 - 357 16129078 ycfT b1115 - predicted inner membrane protein 1047 54.17 0 1174650..1175849 + 399 16129079 lolC b1116 - outer membrane-specific lipoprotein transporter subunit 1048 55.13 0 1175842..1176543 + 233 90111215 lolD b1117 - outer membrane-specific lipoprotein transporter subunit 1049 51.89 0 1176543..1177787 + 414 16129081 lolE b1118 - outer membrane-specific lipoprotein transporter subunit 1050 52.74 0 1177816..1178727 + 303 16129082 nagK b1119 - N-acetyl-D-glucosamine kinase 1051 51.79 0 1178743..1179582 + 279 16129083 cobB b1120 - deacetylase of acetyl-CoA synthetase, NAD-dependent 1052 42.59 -1 1179702..1180490 - 262 16129084 ycfZ b1121 - predicted inner membrane protein 1053 43.51 -1 1180487..1180948 - 153 90111216 ymfA b1122 - predicted inner membrane protein 1054 50.81 0 1181006..1182052 - 348 16129086 potD b1123 - polyamine transporter subunit 1055 50.19 0 1182049..1182843 - 264 16129087 potC b1124 - polyamine transporter subunit 1056 50.85 0 1182840..1183667 - 275 162135921 potB b1125 - polyamine transporter subunit 1057 50.84 0 1183681..1184817 - 378 16129089 potA b1126 - polyamine transporter subunit 1058 49.88 0 1185067..1186293 + 408 16129090 pepT b1127 - peptidase T 1059 54.01 0 1186342..1187463 - 373 90111217 ycfD b1128 - conserved protein 1060 51.33 0 1187539..1188999 - 486 16129092 phoQ b1129 - sensory histidine kinase in two-compoent regulatory system with PhoP 1061 47.77 0 1188999..1189670 - 223 16129093 phoP b1130 - DNA-binding response regulator in two-component regulatory system with PhoQ 1062 52.30 0 1189839..1191209 - 456 16129094 purB b1131 - adenylosuccinate lyase 1063 57.17 +1 1191213..1191854 - 213 16129095 hflD b1132 - predicted lysogenization regulator 1064 53.75 0 1191890..1192996 - 368 90111218 mnmA b1133 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1065 50.22 0 1193050..1193511 - 153 16129097 nudJ b1134 - bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase 1066 51.22 0 1193521..1194174 - 217 162135898 rluE b1135 - 23S rRNA pseudouridine synthase 1067 50.20 0 1194346..1195596 + 416 16129099 icd b1136 - e14 prophage; isocitrate dehydrogenase, specific for NADP+ 1068 34.83 -2 1196090..1196755 - 221 16129100 ymfD b1137 - e14 prophage; predicted SAM-dependent methyltransferase 1069 30.92 -2 1196756..1197460 - 234 16129101 ymfE b1138 - e14 prophage; predicted inner membrane protein 1070 36.80 -2 1197918..1198811 + 297 16129102 lit b1139 - e14 prophage; cell death peptidase, inhibitor of T4 late gene expression 1071 44.77 -1 1198902..1200029 - 375 16129103 intE b1140 - e14 prophage; predicted integrase 1072 44.31 -1 1200010..1200255 - 81 16129104 xisE b1141 - e14 prophage; predicted excisionase 1073 38.60 -2 1200720..1201061 + 113 90111220 ymfI b1143 - e14 prophage; predicted protein 1074 46.93 0 1200999..1201307 - 102 90111221 ymfJ b1144 - e14 prophage; predicted protein 1075 44.44 -1 1201482..1202156 - 224 16129108 ymfK b1145 - e14 prophage; repressor protein phage e14 1076 42.79 -1 1202247..1202447 + 66 90111222 ymfT b1146 - e14 prophage; predicted DNA-binding transcriptional regulator 1077 49.64 0 1202491..1203048 + 185 145698241 ymfL b1147 - e14 prophage; predicted DNA-binding transcriptional regulator 1078 49.85 0 1203045..1203383 + 112 16129111 ymfM b1148 - e14 prophage; predicted protein 1079 54.31 0 1203393..1204760 + 455 16129112 ymfN b1149 - e14 prophage; predicted DNA-binding transcriptional regulator 1080 60.11 +1 1204772..1204954 + 60 16129113 ymfR b1150 - e14 prophage; predicted protein 1081 57.26 +1 1206136..1206720 + 194 16129116 ymfQ b1153 - e14 prophage; conserved protein 1082 50.32 0 1206724..1207353 + 209 16129117 ycfK b1154 - e14 prophage; predicted protein 1083 42.03 -1 1207355..1207768 + 137 16129118 ymfS b1155 - e14 prophage; predicted protein 1084 47.76 0 1207740..1208342 - 200 16129119 tfaE b1156 - e14 prophage; predicted tail fiber assembly protein 1085 48.83 0 1208908..1209462 + 184 16129121 pinE b1158 - e14 prophage; site-specific DNA recombinase 1086 38.37 -2 1209569..1210402 + 277 16129122 mcrA b1159 - e14 prophage; 5-methylcytosine-specific restriction endonuclease B 51.16 MEAN 4.75 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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