IslandPath Analysis: Enterococcus faecalis V583



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 37.28   STD DEV: 4.35
Enterococcus faecalis V583, complete genome - 1..3218031
3113 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2352	 32.92	-1	2447346..2448074	-	242	29377013	-	EF2524	-	sortase family protein
2353	 36.32	0	2448078..2450051	-	657	29377014	-	EF2525	-	cell wall surface anchor family protein
2354	 28.92	-1	2450164..2450730	-	188	29377015	-	EF2526	-	hypothetical protein
2355	 30.08	-1	2450730..2451344	-	204	29377016	-	EF2527	-	hypothetical protein
2356	 32.09	-1	2451422..2452705	-	427	29377017	-	EF2528	-	Cro/CI family transcriptional regulator
2357	 32.16	-1	2453007..2453432	-	141	29377018	-	EF2529	-	hypothetical protein
2358	 28.10	-2	2453457..2453972	-	171	29377019	-	EF2530	-	hypothetical protein
2359	 26.60	-2	2453994..2454290	-	98	29377020	-	EF2531	-	hypothetical protein
2360	 32.96	0	2454291..2454557	-	88	29377021	-	EF2532	-	hypothetical protein
2361	 33.13	0	2454576..2456084	-	502	29377022	-	EF2533	-	FtsK/SpoIIIE family protein
2362	 35.23	0	2456085..2456453	-	122	29377023	-	EF2534	-	hypothetical protein
2363	 35.14	0	2456437..2456769	-	110	29377024	-	EF2535	-	nucleotidyltransferase domain-containing protein
2364	 30.25	-1	2456829..2457152	-	107	29377025	-	EF2536	-	hypothetical protein
2365	 30.42	-1	2457192..2457431	-	79	29377026	-	EF2537	-	hypothetical protein
2366	 32.68	-1	2457442..2457594	-	50	29377027	-	EF2538	-	hypothetical protein
2367	 31.56	-1	2457621..2457845	-	74	29377028	-	EF2539	-	hypothetical protein
2368	 36.54	0	2458000..2458404	-	134	29377029	-	EF2540	-	hypothetical protein
2369	 32.72	-1	2458404..2458730	-	108	29377030	-	EF2541	-	hypothetical protein
2370	 30.16	-1	2458818..2459069	-	83	29377031	-	EF2542	-	hypothetical protein
2371	 29.44	-1	2459816..2459995	-	59	29377032	-	EF2543	-	transcriptional regulator, putative
2372	 29.13	-1	2460151..2460531	+	126	29377033	-	EF2544	-	Cro/CI family transcriptional regulator
2373	 25.19	-2	2460528..2461043	+	171	29377034	-	EF2545	-	hypothetical protein
2374	 27.72	-2	2461061..2462200	+	379	29377035	-	EF2546	-	phage integrase family site specific recombinase
2375	 37.55	0	2462558..2462794	+	78	29377036	-	EF2547	-	hypothetical protein
2376	 35.16	0	2462868..2463140	-	90	29377037	-	EF2548	-	hypothetical protein
2377	 40.32	0	2463246..2463875	-	209	29377038	upp	EF2549	-	uracil phosphoribosyltransferase
2378	 39.63	0	2464007..2465245	-	412	29377039	glyA	EF2550	-	serine hydroxymethyltransferase
2379	 42.03	+1	2465321..2466343	-	340	29377040	-	EF2552	-	Sua5/YciO/YrdC/YwlC family protein
2380	 40.89	0	2466387..2467220	-	277	29377041	hemK	EF2553	-	hemK protein
2381	 40.04	0	2467213..2468286	-	357	29377042	prfA	EF2554	-	peptide chain release factor 1
2382	 34.70	0	2468298..2468882	-	194	29377043	tdK	EF2555	-	thymidine kinase
2383	 39.86	0	2469109..2470626	-	505	29377044	-	EF2556	-	fumarate reductase flavoprotein subunit
2384	 35.95	0	2470996..2472411	+	471	29377045	-	EF2558	-	cation transporter
2385	 39.87	0	2472448..2475981	-	1177	29377046	-	EF2559	-	pyruvate flavodoxin/ferredoxin oxidoreductase family protein
2386	 40.17	0	2476002..2477420	-	472	29377047	gltA	EF2560	-	putative oxidoreductase
2387	 41.31	0	2477413..2478252	-	279	29377048	-	EF2561	-	ferredoxin--NADP(+) reductase subunit alpha
2388	 36.60	0	2478308..2478766	-	152	29377049	-	EF2562	-	flavodoxin
2389	 42.39	+1	2479008..2479802	-	264	29377050	-	EF2563	-	hypothetical protein
2390	 37.96	0	2479802..2480557	-	251	29377051	-	EF2564	-	hypothetical protein
2391	 43.02	+1	2480545..2480802	-	85	29377052	-	EF2565	-	hypothetical protein
2392	 38.78	0	2480823..2481410	-	195	29377053	-	EF2566	-	hypothetical protein
2393	 42.91	+1	2481426..2482448	-	340	29377054	selD	EF2567	-	selenide, water dikinase
2394	 41.08	0	2482464..2483612	-	382	29377055	-	EF2568	-	aminotransferase, class V
2395	 38.32	0	2483626..2484207	-	193	29377056	-	EF2569	-	hypothetical protein
2396	 42.15	+1	2484221..2486794	-	857	29377057	-	EF2570	-	aldehyde oxidoreductase, putative
2397	 39.48	0	2486915..2487922	-	335	29377058	-	EF2571	-	hypothetical protein
2398	 36.39	0	2487919..2488278	-	119	29377059	-	EF2572	-	molybdenum transporter
2399	 38.64	0	2488372..2489691	-	439	29377060	-	EF2573	-	xanthine/uracil permease family protein
2400	 36.75	0	2489785..2490165	-	126	29377061	-	EF2574	-	endoribonuclease L-PSP, putative
2401	 40.00	0	2490180..2491124	-	314	29377062	arcC-4	EF2575	-	carbamate kinase
2402	 38.60	0	2491146..2491259	-	37	29377063	-	EF2576	-	hypothetical protein
2403	 37.10	0	2491365..2492558	-	397	29377064	-	EF2577	-	hypothetical protein
2404	 41.10	0	2492597..2493922	-	441	161511184	-	EF2578	-	peptidase
2405	 40.03	0	2493913..2495076	-	387	29377066	-	EF2579	-	diaminopropionate ammonia-lyase
2406	 41.12	0	2495130..2496503	-	457	29377067	-	EF2580	-	dihydropyrimidinase
2407	 38.36	0	2496533..2499538	-	1001	29377068	-	EF2581	-	putative selenate reductase subunit YgfK
2408	 39.85	0	2499569..2500903	-	444	29377069	-	EF2582	-	putative chlorohydrolase/aminohydrolase
2409	 34.59	0	2501307..2501945	+	212	29377070	-	EF2583	-	hypothetical protein
2410	 35.71	0	2502398..2502565	+	55	29377071	-	EF2584	-	hypothetical protein
2411	 37.47	0	2502660..2504012	+	450	29377072	-	EF2585	-	mur ligase family protein
2412	 36.94	0	2504002..2504694	+	230	29377073	-	EF2586	-	cobyric acid synthase, putative
2413	 39.59	0	2504931..2505905	+	324	29377074	-	EF2587	-	inosine-uridine preferring nucleoside hydrolase
2414	 37.73	0	2505908..2506453	+	181	29377075	-	EF2588	-	hypothetical protein
2415	 39.30	0	2506507..2507478	-	323	29377076	manA	EF2589	-	mannose-6-phosphate isomerase, class I
2416	 37.16	0	2507520..2508563	-	347	29377077	-	EF2590	-	hypothetical protein
2417	 34.66	0	2508693..2509520	-	275	29377078	-	EF2591	-	glyoxalase family protein
2418	 38.52	0	2509725..2511593	-	622	29377079	-	EF2592	-	ABC transporter, ATP-binding/permease protein
2419	 37.85	0	2511590..2513317	-	575	29377080	-	EF2593	-	ABC transporter, ATP-binding/permease protein
2420	 36.58	0	2513338..2514015	-	225	29377081	-	EF2594	-	TetR family transcriptional regulator
2421	 35.96	0	2514163..2514732	-	189	29377082	gmk-1	EF2595	-	guanylate kinase
2422	 37.55	0	2514914..2516359	-	481	29377083	-	EF2597	-	glycosy hydrolase family protein
2423	 39.23	0	2516384..2518264	-	626	29377084	-	EF2598	-	PTS system, beta-glucoside-specific IIABC component
2424	 36.65	0	2518427..2519269	-	280	29377085	-	EF2599	-	BglG family transcriptional antiterminator
2425	 37.48	0	2519570..2520196	+	208	29377086	-	EF2601	-	acyl carrier protein, putative
2426	 36.75	0	2520258..2521427	-	389	29377087	-	EF2602	-	hypothetical protein
2427	 38.32	0	2521432..2521812	-	126	29377088	-	EF2603	-	PTS system, IIA component
2428	 28.25	-2	2521928..2522104	-	58	29377089	-	EF2604	-	hypothetical protein
2429	 39.17	0	2522118..2523419	-	433	29377090	murAA	EF2605	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
2430	 35.44	0	2523522..2523758	-	78	29377091	-	EF2606	-	hypothetical protein
2431	 43.81	+1	2523947..2524366	-	139	29377092	atpC	EF2607	-	F0F1 ATP synthase subunit epsilon
2432	 40.80	0	2524383..2525789	-	468	29377093	atpD	EF2608	-	F0F1 ATP synthase subunit beta
2433	 39.38	0	2525863..2526771	-	302	29377094	atpG	EF2609	-	F0F1 ATP synthase subunit gamma
2434	 40.21	0	2526787..2528343	-	518	29377095	atpA	EF2610	-	F0F1 ATP synthase subunit alpha
2435	 38.12	0	2528372..2528914	-	180	29377096	atpH	EF2611	-	F0F1 ATP synthase subunit delta
2436	 36.91	0	2528901..2529431	-	176	29377097	atpF	EF2612	-	ATP synthase F0, B subunit
2437	 37.84	0	2529569..2529790	-	73	29377098	atpE	EF2613	-	ATP synthase F0, C subunit
2438	 38.19	0	2529839..2530558	-	239	29377099	atpB	EF2614	-	F0F1 ATP synthase subunit A
2439	 34.31	0	2530681..2530782	-	33	29377100	-	EF2615	-	hypothetical protein
2440	 34.62	0	2530861..2531325	-	154	29377101	smpB	EF2616	-	SsrA-binding protein
2441	 37.89	0	2531338..2533707	-	789	29377102	vacB	EF2617	-	ribonuclease R
2442	 40.78	0	2533707..2534471	-	254	29377103	-	EF2618	-	carboxylesterase precursor, putative
2443	 30.30	-1	2534488..2534586	-	32	29377104	-	EF2619	-	hypothetical protein
2444	 37.13	0	2534626..2534862	-	78	29377105	secG	EF2620	-	preprotein translocase, SecG subunit
2445	 33.33	0	2535030..2535305	-	91	29377106	-	EF2621	-	hypothetical protein
2446	 35.79	0	2535295..2535579	-	94	29377107	-	EF2622	-	hypothetical protein
2447	 40.31	0	2535671..2537476	-	601	29377108	cadA	EF2623	-	cadmium-translocating P-type ATPase
2448	 33.33	0	2537502..2537597	-	31	29377109	-	EF2624	-	hypothetical protein
2449	 40.10	0	2537668..2538495	-	275	29377110	nadE	EF2625	-	NAD synthetase
2450	 38.25	0	2538498..2539982	-	494	29377111	-	EF2626	-	nicotinate phosphoribosyltransferase
2451	 31.63	-1	2540060..2540470	-	136	29377112	-	EF2627	-	teichoic acid glycosylation protein, putative
37.28	MEAN

4.35	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.