IslandPath Analysis: Enterococcus faecalis V583



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 37.28   STD DEV: 4.35
Enterococcus faecalis V583, complete genome - 1..3218031
3113 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2273	 38.27	0	2359036..2359785	-	249	29376934	-	EF2440	-	celC-related protein
2274	 31.57	-1	2359840..2360463	-	207	29376935	-	EF2441	-	hypothetical protein
2275	 41.64	+1	2360476..2361510	-	344	29376936	-	EF2442	-	phosphate transporter family protein
2276	 37.70	0	2361721..2361972	+	83	29376937	rpsT	EF2443	-	ribosomal protein S20
2277	 37.62	0	2362059..2362595	-	178	29376938	-	EF2444	-	acyl-CoA thioester hydrolase
2278	 37.47	0	2362785..2363726	+	313	29376939	-	EF2445	-	2-dehydropantoate 2-reductase
2279	 33.92	0	2363778..2364806	-	342	29376940	holA	EF2446	-	DNA polymerase III subunit delta
2280	 38.76	0	2364864..2367203	-	779	29376941	-	EF2447	-	DNA internalization-related competence protein ComEC/Rec2
2281	 39.29	0	2367163..2367666	-	167	29376942	-	EF2448	-	comE operon protein 2, putative
2282	 41.24	0	2367789..2368433	-	214	29376943	comEA	EF2449	-	competence protein comEA
2283	 35.52	0	2368529..2369581	-	350	29376944	-	EF2450	-	PDZ domain-containing protein
2284	 35.37	0	2369586..2370077	-	163	29376945	coaD	EF2451	-	pantetheine-phosphate adenylyltransferase
2285	 36.76	0	2370079..2370633	-	184	29376946	-	EF2452	-	methylase, putative
2286	 34.76	0	2370732..2371082	-	116	29376947	-	EF2453	-	hypothetical protein
2287	 37.24	0	2371072..2371506	-	144	29376948	-	EF2454	-	hypothetical protein
2288	 38.40	0	2371503..2372627	-	374	29376949	-	EF2455	-	hypothetical protein
2289	 40.51	0	2372644..2376072	-	1142	29376950	pycA	EF2456	-	pyruvate carboxylase
2290	 36.64	0	2376105..2377313	-	402	29376951	-	EF2457	-	cell cycle protein FtsW
2291	 34.31	0	2377317..2377622	-	101	29376952	-	EF2458	-	hypothetical protein
2292	 37.85	0	2377849..2379618	-	589	29376953	recQ-2	EF2459	-	ATP-dependent DNA helicase RecQ
2293	 38.62	0	2379936..2381771	-	611	29376954	-	EF2460	-	GTP-binding protein TypA
2294	 37.16	0	2381992..2382774	-	260	29376955	-	EF2461	-	inositol monophosphatase family protein
2295	 37.63	0	2382775..2383053	-	92	29376956	-	EF2462	-	hypothetical protein
2296	 40.21	0	2383103..2384368	-	421	29376957	-	EF2463	-	voltage-gated chloride channel family protein
2297	 37.78	0	2384565..2385554	-	329	29376958	-	EF2464	-	hypothetical protein
2298	 36.11	0	2385811..2385954	-	47	29376959	-	EF2465	-	hypothetical protein
2299	 37.21	0	2385982..2390517	-	1511	29376960	-	EF2466	-	hypothetical protein
2300	 28.32	-2	2390501..2390779	-	92	29376961	-	EF2467	-	hypothetical protein
2301	 32.10	-1	2390961..2391284	+	107	29376962	-	EF2469	-	Cro/CI family transcriptional regulator
2302	 38.37	0	2391365..2391880	-	171	29376963	-	EF2470	-	HD domain-containing protein
2303	 35.34	0	2392021..2393712	-	563	29376964	argS	EF2471	-	arginyl-tRNA synthetase
2304	 43.17	+1	2394032..2395078	-	348	29376965	gcp	EF2472	-	O-sialoglycoprotein endopeptidase
2305	 33.55	0	2395075..2395539	-	154	29376966	-	EF2473	-	ribosomal-protein-alanine acetyltransferase, putative
2306	 39.10	0	2395547..2396014	-	155	29376967	-	EF2474	-	ribosomal-protein-alanine acetyltransferase, putative
2307	 39.68	0	2396073..2396828	-	251	29376968	-	EF2475	-	hypothetical protein
2308	 37.84	0	2396908..2398950	-	680	29376969	-	EF2476	-	penicillin-binding protein 4
2309	 39.33	0	2399158..2400390	+	410	29376970	-	EF2477	-	hypothetical protein
2310	 39.18	0	2400494..2401639	+	381	29376971	-	EF2478	-	hypothetical protein
2311	 39.38	0	2401636..2402445	+	269	29376972	-	EF2479	-	hypothetical protein
2312	 34.14	0	2402668..2403411	+	247	29376973	-	EF2480	-	hypothetical protein
2313	 36.20	0	2403772..2404503	-	243	29376974	-	EF2481	-	HAD superfamily hydrolase
2314	 31.14	-1	2404651..2404878	-	75	29376975	-	EF2483	-	hypothetical protein
2315	 37.79	0	2404966..2405616	-	216	29376976	-	EF2484	-	hypothetical protein
2316	 31.49	-1	2406279..2407091	-	270	29376977	-	EF2485	-	ABC transporter, permease protein
2317	 35.19	0	2407091..2408434	-	447	29376978	-	EF2486	-	ABC transporter, ATP-binding protein
2318	 35.70	0	2408460..2409599	-	379	29376979	glf	EF2487	-	UDP-galactopyranose mutase
2319	 29.07	-1	2409658..2410056	-	132	29376980	-	EF2488	-	putative lipoprotein
2320	 33.01	0	2410074..2412527	-	817	29376981	-	EF2489	-	MurB family protein
2321	 32.04	-1	2412554..2413405	-	283	29376982	-	EF2490	-	hypothetical protein
2322	 32.06	-1	2413429..2415939	-	836	29376983	-	EF2491	-	glycosyl transferase, group 2 family protein
2323	 34.01	0	2416009..2417475	-	488	29376984	-	EF2492	-	glycosyl transferase, group 2 family protein
2324	 34.19	0	2417494..2418663	-	389	29376985	-	EF2493	-	teichoic acid biosynthesis protein, putative
2325	 38.20	0	2419136..2419936	-	266	29376986	cdsA	EF2494	-	phosphatidate cytidylyltransferase
2326	 40.32	0	2419933..2420748	-	271	29376987	uppS	EF2495	-	undecaprenyl diphosphate synthase
2327	 37.36	0	2421096..2421914	-	272	29376988	-	EF2496	-	pheromone cOB1 precursor/lipoprotein YaeC family
2328	 38.57	0	2421929..2422615	-	228	29376989	-	EF2497	-	ABC transporter, permease protein
2329	 38.15	0	2422608..2423645	-	345	29376990	-	EF2498	-	ABC transporter, ATP-binding protein
2330	 46.24	+2	2423806..2423898	-	30	29376991	-	EF2499	-	hypothetical protein
2331	 37.46	0	2424060..2424374	-	104	29376992	-	EF2500	-	GcvH family protein
2332	 37.50	0	2424380..2424739	-	119	29376993	-	EF2501	-	arsenate reductase, putative
2333	 37.37	0	2424764..2425951	-	395	29376994	-	EF2502	-	cell cycle protein FtsW
2334	 32.29	-1	2426195..2427631	-	478	29376995	-	EF2503	-	hypothetical protein
2335	 37.75	0	2427632..2428333	-	233	29376996	-	EF2504	-	hypothetical protein
2336	 37.65	0	2428532..2433487	-	1651	29376997	-	EF2505	-	cell wall surface anchor family protein
2337	 35.74	0	2433663..2434994	-	443	29376998	-	EF2507	-	hypothetical protein
2338	 35.69	0	2435107..2435658	-	183	29376999	-	EF2508	-	Cro/CI family transcriptional regulator
2339	 40.40	0	2435872..2436579	+	235	29377000	-	EF2509	-	AzlC family protein
2340	 28.06	-2	2437123..2437482	-	119	29377001	-	EF2512	-	putative lipoprotein
2341	 32.77	-1	2437550..2438086	-	178	29377002	-	EF2513	-	putative lipoprotein
2342	 28.00	-2	2438083..2438307	-	74	29377003	-	EF2514	-	hypothetical protein
2343	 37.22	0	2438320..2439348	-	342	29377004	-	EF2515	-	hypothetical protein
2344	 32.84	-1	2439390..2441435	-	681	29377005	-	EF2516	-	hypothetical protein
2345	 33.69	0	2441451..2443955	-	834	29377006	-	EF2517	-	conjugal transfer protein, putative
2346	 33.79	0	2444117..2444335	+	72	29377007	-	EF2518	-	hypothetical protein
2347	 33.85	0	2444728..2445117	-	129	29377008	-	EF2519	-	hypothetical protein
2348	 32.44	-1	2445126..2445350	-	74	29377009	-	EF2520	-	hypothetical protein
2349	 30.80	-1	2445350..2446336	-	328	29377010	-	EF2521	-	hypothetical protein
2350	 28.21	-2	2446317..2446784	-	155	29377011	-	EF2522	-	hypothetical protein
2351	 30.43	-1	2446781..2447332	-	183	29377012	-	EF2523	-	hypothetical protein
2352	 32.92	-1	2447346..2448074	-	242	29377013	-	EF2524	-	sortase family protein
2353	 36.32	0	2448078..2450051	-	657	29377014	-	EF2525	-	cell wall surface anchor family protein
2354	 28.92	-1	2450164..2450730	-	188	29377015	-	EF2526	-	hypothetical protein
2355	 30.08	-1	2450730..2451344	-	204	29377016	-	EF2527	-	hypothetical protein
2356	 32.09	-1	2451422..2452705	-	427	29377017	-	EF2528	-	Cro/CI family transcriptional regulator
2357	 32.16	-1	2453007..2453432	-	141	29377018	-	EF2529	-	hypothetical protein
2358	 28.10	-2	2453457..2453972	-	171	29377019	-	EF2530	-	hypothetical protein
2359	 26.60	-2	2453994..2454290	-	98	29377020	-	EF2531	-	hypothetical protein
2360	 32.96	0	2454291..2454557	-	88	29377021	-	EF2532	-	hypothetical protein
2361	 33.13	0	2454576..2456084	-	502	29377022	-	EF2533	-	FtsK/SpoIIIE family protein
2362	 35.23	0	2456085..2456453	-	122	29377023	-	EF2534	-	hypothetical protein
2363	 35.14	0	2456437..2456769	-	110	29377024	-	EF2535	-	nucleotidyltransferase domain-containing protein
2364	 30.25	-1	2456829..2457152	-	107	29377025	-	EF2536	-	hypothetical protein
2365	 30.42	-1	2457192..2457431	-	79	29377026	-	EF2537	-	hypothetical protein
2366	 32.68	-1	2457442..2457594	-	50	29377027	-	EF2538	-	hypothetical protein
2367	 31.56	-1	2457621..2457845	-	74	29377028	-	EF2539	-	hypothetical protein
2368	 36.54	0	2458000..2458404	-	134	29377029	-	EF2540	-	hypothetical protein
2369	 32.72	-1	2458404..2458730	-	108	29377030	-	EF2541	-	hypothetical protein
2370	 30.16	-1	2458818..2459069	-	83	29377031	-	EF2542	-	hypothetical protein
2371	 29.44	-1	2459816..2459995	-	59	29377032	-	EF2543	-	transcriptional regulator, putative
2372	 29.13	-1	2460151..2460531	+	126	29377033	-	EF2544	-	Cro/CI family transcriptional regulator
37.28	MEAN

4.35	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.