version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 859 29.72 -2 896774..897244 + 156 71281502 - CPS_0892 - hypothetical protein 860 33.33 -1 897186..897296 + 36 71280591 - CPS_0893 - hypothetical protein 861 41.33 0 897465..898352 - 295 71281247 - CPS_0894 - ISCps3, transposase orfB 862 40.50 0 898283..898645 - 120 71281950 - CPS_0895 - ISCps3, transposase orfA 863 31.30 -1 898731..899123 - 130 71281435 - CPS_0896 - hypothetical protein 864 34.00 -1 899224..899676 - 150 71281929 - CPS_0897 - hypothetical protein 865 29.96 -2 899673..900353 - 226 71280695 - CPS_0898 - hypothetical protein 866 37.20 0 900319..900525 - 68 71279748 - CPS_0899 - hypothetical protein 867 33.73 -1 901027..902031 + 334 71281181 - CPS_0900 - phage integrase family site specific recombinase 868 38.45 0 902252..903013 - 253 71280640 - CPS_0901 - hypothetical protein 869 39.69 0 903070..903966 + 298 71279477 - CPS_0902 - acetyltransferase 870 40.96 0 903998..904495 + 165 71280186 - CPS_0903 - hypothetical protein 871 40.22 0 904523..905437 + 304 71282099 - CPS_0904 - hypothetical protein 872 32.26 -1 905508..905786 + 92 71280291 - CPS_0905 - hypothetical protein 873 40.73 0 905786..906718 + 310 71278711 - CPS_0906 - NifR3/Smm1 family protein 874 36.51 0 906787..906912 + 41 71281711 - CPS_0907 - hypothetical protein 875 40.32 0 907180..908724 - 514 71278652 hutH CPS_0908 - histidine ammonia-lyase 876 44.07 +1 908887..910581 - 564 71277962 hutU CPS_0909 - urocanate hydratase 877 36.72 0 910721..911458 - 245 71280178 hutC CPS_0910 - histidine utilization repressor 878 41.69 +1 911672..912928 + 418 71279387 hutI CPS_0911 - imidazolonepropionase 879 36.57 0 913485..914195 + 236 71281657 - CPS_0912 - hypothetical protein 880 37.04 0 914221..916569 + 782 71282335 - CPS_0913 - sensory box protein 881 41.77 +1 916584..917852 + 422 71280241 - CPS_0914 - hypothetical protein 882 37.55 0 917908..918618 - 236 71280956 - CPS_0915 - glycerophosphoryl diester phosphodiesterase family protein 883 38.20 0 918971..919915 + 314 71281709 - CPS_0916 - RNA pseudouridine synthase family protein 884 41.67 +1 920056..921951 - 631 71281178 - CPS_0917 - acid-CoA ligase family protein 885 36.07 0 922561..922779 + 72 71279644 - CPS_0918 - DNA-binding protein 886 39.56 0 922838..923383 - 181 71279109 - CPS_0919 - hypothetical protein 887 41.24 0 923476..926307 - 943 71281224 uvrA CPS_0920 - excinuclease ABC, A subunit 888 36.84 0 926684..926797 - 37 71280684 - CPS_0921 - hypothetical protein 889 40.81 0 926822..928186 + 454 71280107 - CPS_0922 - major facilitator family transporter 890 35.19 0 928321..928536 + 71 71279531 - CPS_0923 - hypothetical protein 891 43.42 +1 928567..929052 - 161 71280898 - CPS_0924 - hypothetical protein 892 41.41 0 929218..931260 + 680 71280229 fadH1 CPS_0925 - 2,4-dienoyl-CoA reductase 893 36.79 0 931386..932714 + 442 71277754 pssA CPS_0926 - phosphatidylserine synthase 894 37.11 0 932787..934613 - 608 71282281 - CPS_0927 - hypothetical protein 895 31.78 -1 934637..934894 + 85 71278777 - CPS_0928 - hypothetical protein 896 38.38 0 935056..935451 + 131 71279671 - CPS_0929 - thioesterase family protein 897 43.59 +1 935811..936512 + 233 71277762 ssb CPS_0930 - single-strand binding protein 898 41.28 0 936638..937681 - 347 71279530 - CPS_0931 - oxidoreductase, zinc-binding 899 34.34 -1 937757..937855 + 32 71279954 - CPS_0932 - hypothetical protein 900 40.58 0 937900..938589 - 229 71279077 - CPS_0933 - ThiJ/PfpI family protein 901 40.80 0 938739..939635 + 298 71278365 - CPS_0934 - LysR family transcriptional regulator 902 40.41 0 939721..940752 + 343 71281506 - CPS_0935 - putative polyhydroxyalkanoate depolymerase 903 37.59 0 940893..943145 + 750 71282170 - CPS_0936 - TonB-dependent receptor 904 39.58 0 943259..943930 + 223 71279165 - CPS_0937 - LuxR family DNA-binding response regulator 905 39.13 0 944052..945017 - 321 71278160 - CPS_0938 - putative lipoprotein 906 40.52 0 945172..948678 - 1168 71279574 - CPS_0939 - sensory box sensor histidine kinase/response regulator 907 37.09 0 948888..950084 + 398 71278280 - CPS_0940 - major facilitator family transporter 908 39.84 0 950072..951055 + 327 71282424 - CPS_0941 - putative lipase 909 41.61 +1 951183..951665 - 160 71278815 - CPS_0942 - putative lipoprotein 910 41.70 +1 952016..952828 - 270 71280310 bdhA1 CPS_0943 - D-beta-hydroxybutyrate dehydrogenase 911 41.22 0 953358..953636 - 92 71280757 - CPS_0944 - hypothetical protein 912 39.55 0 953817..953993 - 58 71280935 - CPS_0945 - hypothetical protein 913 40.01 0 954102..955448 - 448 71281294 accC CPS_0946 - acetyl-CoA carboxylase biotin carboxylase subunit 914 42.51 +1 955471..955917 - 148 71279126 accB CPS_0947 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 915 38.10 0 956008..956469 - 153 71281376 aroQ CPS_0948 - 3-dehydroquinate dehydratase 916 30.83 -2 956530..956649 + 39 71279592 - CPS_0949 - hypothetical protein 917 37.78 0 956889..957248 + 119 71282370 - CPS_0950 - hypothetical protein 918 35.81 0 957226..958518 + 430 71281934 - CPS_0951 - hypothetical protein 919 36.13 0 958529..960994 + 821 71279060 - CPS_0952 - GGDEF/EAL domain-containing protein 920 37.33 0 961255..963081 - 608 71278562 dipZ CPS_0953 - thiol:disulfide interchange protein precursor 921 34.94 0 963087..963398 - 103 71280302 cutA CPS_0954 - periplasmic divalent cation tolerance protein CutA 922 39.50 0 963531..964049 + 172 71280199 fsxA CPS_0955 - fxsA protein 923 38.83 0 964180..964470 + 96 71278078 groES CPS_0956 - co-chaperonin GroES 924 41.47 0 964651..966297 + 548 71279743 groEL CPS_0957 - chaperone protein GroEL 925 36.36 0 966746..967804 - 352 71279065 - CPS_0958 - ompA family protein 926 34.01 -1 968039..968185 - 48 71280868 - CPS_0959 - hypothetical protein 927 37.13 0 968189..968425 - 78 71280644 - CPS_0960 - hypothetical protein 928 36.48 0 968369..969193 + 274 71279452 - CPS_0961 - hypothetical protein 929 36.52 0 969211..969744 + 177 71280780 - CPS_0962 - RNA polymerase sigma factor SigX 930 36.56 0 969804..969896 + 30 71281289 - CPS_0963 - hypothetical protein 931 32.43 -1 969868..970422 - 184 71278715 - CPS_0964 - hypothetical protein 932 38.25 0 970501..972189 - 562 71281747 - CPS_0965 - ompA family protein 933 27.62 -2 972254..972358 + 34 71277999 - CPS_0966 - hypothetical protein 934 35.45 0 972518..973084 + 188 71278514 - CPS_0967 - putative lipoprotein 935 36.51 0 973168..973671 + 167 71280829 - CPS_0968 - hypothetical protein 936 37.24 0 973933..975597 + 554 71282435 - CPS_0969 - mechanosensitive ion channel family protein 937 35.97 0 975654..975956 - 100 71279854 - CPS_0970 - hypothetical protein 938 40.52 0 976056..977084 - 342 71278705 - CPS_0971 - hypothetical protein 939 39.93 0 977194..977769 + 191 71279673 efp CPS_0972 - translation elongation factor P 940 38.16 0 977818..978501 + 227 71279004 - CPS_0973 - putative lipoprotein 941 40.76 0 978791..979813 + 340 71279718 - CPS_0974 - putative sugar-binding protein 942 40.15 0 979918..981414 - 498 71278158 - CPS_0975 - hypothetical protein 943 41.76 +1 981668..982687 - 339 71280661 glk2 CPS_0976 - glucokinase 944 39.93 0 982802..985075 - 757 71278726 - CPS_0977 - TonB-dependent receptor 945 38.82 0 985269..986288 + 339 71277899 - CPS_0978 - LacI family transcription regulator 946 37.69 0 986274..986939 - 221 71281450 - CPS_0979 - putative beta-phosphoglucomutase 947 36.24 0 986971..989340 - 789 71282525 - CPS_0980 - glycosy hydrolase family protein 948 36.78 0 989548..990795 + 415 71279458 - CPS_0981 - hypothetical protein 949 41.03 0 991007..992032 - 341 71279057 glk3 CPS_0982 - glucokinase 950 39.71 0 992036..994546 - 836 71281290 - CPS_0983 - glycosy hydrolase family protein 951 39.70 0 994838..996454 + 538 71280861 - CPS_0984 - alpha amylase family protein 952 39.01 0 996536..998350 + 604 71280187 - CPS_0985 - putative alpha amylase 953 39.98 0 998514..1000694 - 726 71280703 - CPS_0986 - major facilitator family transporter 954 38.95 0 1001107..1001694 - 195 71278172 - CPS_0987 - TetR family transcriptional regulator 955 40.20 0 1001858..1003285 - 475 71278700 - CPS_0988 - putative coniferyl aldehyde dehydrogenase 956 36.92 0 1003611..1004168 - 185 71281436 - CPS_0989 - hypothetical protein 957 38.33 0 1004273..1005172 - 299 71282301 - CPS_0990 - LysR family transcriptional regulator 958 41.10 0 1005379..1006356 + 325 71282009 - CPS_0991 - oxidoreductase, zinc-binding 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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